Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1080
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a) ident... 107 9e-24
At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly... 105 2e-23
At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b) ident... 103 2e-22
At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly... 103 2e-22
At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1... 100 1e-21
At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1... 99 2e-21
At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1) id... 87 1e-17
At2g32410.1 68415.m03960 auxin-resistance protein, putative stro... 84 1e-16
At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly ... 59 2e-09
At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly ... 59 2e-09
At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative (... 55 4e-08
At5g37530.1 68418.m04520 thiF family protein similar to SP|P3013... 46 3e-05
At1g05350.1 68414.m00542 thiF family protein low similarity to S... 45 6e-05
At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3... 44 1e-04
At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1) id... 33 0.24
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 29 3.9
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 29 3.9
At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subun... 29 3.9
At2g06120.1 68415.m00672 hypothetical protein contains Pfam prof... 28 5.2
At5g45300.1 68418.m05561 glycosyl hydrolase family 14 protein si... 27 9.0
At5g05740.2 68418.m00632 peptidase M50 family protein / sterol-r... 27 9.0
At5g05740.1 68418.m00631 peptidase M50 family protein / sterol-r... 27 9.0
>At4g24940.1 68417.m03572 SUMO activating enzyme 1a (SAE1a)
identical to SUMO activating enzyme 1a [Arabidopsis
thaliana] GI:22652850; contains Pfam profile PF00899:
ThiF family
Length = 322
Score = 107 bits (256), Expect = 9e-24
Identities = 63/171 (36%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Frame = +3
Query: 111 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 290
EL+E E YDRQIR+WG ++Q+RL A +L+ G+ G AE KN++L GV SV L+D+
Sbjct: 5 ELTEQETALYDRQIRVWGANAQRRLTKAHILVSGIKGTVAEFCKNIVLAGVGSVTLMDDR 64
Query: 291 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEF 461
L + FL PPD+ G AE + + NPMV V+ + L FF +F
Sbjct: 65 LANMEALNANFLIPPDENVYSGKTVAEICSDSLKDFNPMVRVSVEKGDLSMLGTDFFEQF 124
Query: 462 DVVCATGLKQEQFERINNACRDSNKK--FICGDVWGTYGYMFSDLVDHEYS 608
DVV + + +N CR K+ F D + G +F DL D++Y+
Sbjct: 125 DVVVIGYGSRATKKYVNEKCRKLKKRVAFYTVDCRDSCGEIFVDLQDYKYT 175
>At5g50580.1 68418.m06265 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 318
Score = 105 bits (253), Expect = 2e-23
Identities = 65/183 (35%), Positives = 96/183 (52%), Gaps = 5/183 (2%)
Frame = +3
Query: 111 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 290
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 291 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEF 461
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 462 DVVCATGLKQEQFERINNACRDSNK--KFICGDVWGTYGYMFSDLVDHEYSXGDCTTQSH 635
DVV + + +N CR+ K F D G+ G +F DL +++Y+ D T +
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAKDVAFYTVDCRGSCGEIFVDLQNYKYTKLDETVECE 184
Query: 636 QTW 644
T+
Sbjct: 185 LTF 187
>At5g50680.1 68418.m06280 SUMO activating enzyme 1b (SAE1b)
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50580;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 103 bits (246), Expect = 2e-22
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Frame = +3
Query: 111 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 290
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 291 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEF 461
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 462 DVVCATGLKQEQFERINNACRDSNK--KFICGDVWGTYGYMFSDLVDHEYS 608
DVV + + +N CR+ K F D G+ G +F DL +++Y+
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAKDVAFYTVDCRGSCGEIFVDLQNYKYT 175
>At5g50580.2 68418.m06266 SUMO activating enzyme, putative nearly
identical to SUMO activating enzyme 1b [Arabidopsis
thaliana] GI:22652852; nearly identical to At5g50680;
contains Pfam profile PF00899: ThiF family
Length = 320
Score = 103 bits (246), Expect = 2e-22
Identities = 62/171 (36%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Frame = +3
Query: 111 ELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNE 290
EL+E E YDRQIR+WG +Q+RL + VL+ G+ G AE KN++L GV SV LLD+
Sbjct: 5 ELTEQETALYDRQIRVWGAGAQRRLSKSHVLVSGIKGTVAEFCKNIVLAGVGSVTLLDDR 64
Query: 291 KLKQIDLYSQFLCPPDK---IGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEF 461
+ + FL PD+ +G AE + + NPMV V+ + L FF +F
Sbjct: 65 LVTTEVFNANFLILPDENAYVGKTVAEICCDSLKDFNPMVHVSIEKGDLSTLGVDFFEKF 124
Query: 462 DVVCATGLKQEQFERINNACRDSNK--KFICGDVWGTYGYMFSDLVDHEYS 608
DVV + + +N CR+ K F D G+ G +F DL +++Y+
Sbjct: 125 DVVVIGYSSRATKKAVNEKCRNLAKDVAFYTVDCRGSCGEIFVDLQNYKYT 175
>At2g30110.1 68415.m03664 ubiquitin activating enzyme 1 (UBA1) E1;
identical to GB:U80808
Length = 1080
Score = 100 bits (239), Expect = 1e-21
Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 2/158 (1%)
Frame = +3
Query: 120 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 299
E + + + RQ+ ++G ++ +RL A+ VLI G+ GLGAEIAKN+IL GVKSV L D ++
Sbjct: 72 EIDEDLHSRQLAVYGRETMRRLFASNVLISGMHGLGAEIAKNLILAGVKSVTLHDERVVE 131
Query: 300 QIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCAT 479
DL S F+ D +G NRA+ S+++ + LN V V+S TK +++ + F VV +
Sbjct: 132 LWDLSSNFVFSEDDVGKNRADASVQKLQDLNNAVVVSSLTKSLNK---EDLSGFQVVVFS 188
Query: 480 GLKQEQFERINNACRDSNK--KFICGDVWGTYGYMFSD 587
+ E+ ++ C F+ DV G +G +F D
Sbjct: 189 DISMERAIEFDDYCHSHQPPIAFVKADVRGLFGSVFCD 226
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +3
Query: 135 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 299
+YD QI ++G QK+L AKV +G LG E KN+ L GV + + D++ ++
Sbjct: 474 RYDAQISVFGAKFQKKLEDAKVFTVGSGALGCEFLKNLALMGVSCGSQGKLTVTDDDIIE 533
Query: 300 QIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTE 458
+ +L QFL IG ++ + A +NP ++ + V ++ F +
Sbjct: 534 KSNLSRQFLFRDWNIGQAKSTVAASAAAVINPRFNIEALQNRVGAETENVFDD 586
>At5g06460.1 68418.m00724 ubiquitin activating enzyme 2 (UBA2) E1;
identical to gi:1703477
Length = 1077
Score = 99.1 bits (236), Expect = 2e-21
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 2/170 (1%)
Frame = +3
Query: 96 GNNEVELSEAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVC 275
GN+ E + + + RQ+ ++G ++ ++L A+ VLI G+ GLG EIAKN+IL GVKSV
Sbjct: 61 GNDNSNNQEIDEDLHSRQLAVYGRETMRKLFASNVLISGMQGLGVEIAKNIILAGVKSVT 120
Query: 276 LLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFT 455
L D ++ DL S F+ + IG NRA S+ + + LN V V++ T +L +
Sbjct: 121 LHDENVVELWDLSSNFVFTEEDIGKNRALASVHKLQELNNAVAVSTLT---GKLTKEQLS 177
Query: 456 EFDVVCATGLKQEQFERINNACRDSNK--KFICGDVWGTYGYMFSDLVDH 599
+F VV + E+ I++ C FI DV G +G +F D H
Sbjct: 178 DFQVVVFVDISFEKATEIDDYCHSHQPPIAFIKADVRGLFGSLFCDFGPH 227
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
Frame = +3
Query: 135 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-----SVCLLDNEKLK 299
+YD QI ++G QK+L A+V ++G LG E KN+ L GV + + D++ ++
Sbjct: 471 RYDAQISVFGSTLQKKLEDARVFVVGAGALGCEFLKNLALMGVSCGTQGKLTVTDDDVIE 530
Query: 300 QIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTE 458
+ +L QFL IG ++ + A G+N +++ + V ++ F +
Sbjct: 531 KSNLSRQFLFRDWNIGQAKSTVAATAAAGINSRLNIDALQNRVGPETENVFDD 583
>At1g05180.1 68414.m00522 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 540
Score = 86.6 bits (205), Expect = 1e-17
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 3/158 (1%)
Frame = +3
Query: 135 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 314
+YDRQ+R+WG Q L A + ++ G+E KN++L GV S+ ++D K++ DL
Sbjct: 23 KYDRQLRIWGEVGQAALEEASICLLNCGPTGSEALKNLVLGGVGSITVVDGSKVQFGDLG 82
Query: 315 SQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGL 485
+ F+ +G ++A+ + LN V+ + D L SFF++F +V AT L
Sbjct: 83 NNFMVDAKSVGQSKAKSVCAFLQELNDSVNAKFIEENPDTLITTNPSFFSQFTLVIATQL 142
Query: 486 KQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 599
++ +++ CRD+N K + +G G++ + +H
Sbjct: 143 VEDSMLKLDRICRDANVKLVLVRSYGLAGFVRISVKEH 180
>At2g32410.1 68415.m03960 auxin-resistance protein, putative strong
similarity to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family
Length = 523
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Frame = +3
Query: 135 QYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLY 314
+YDRQ+R+WG Q L A + ++ G+E KN+++ G+ S+ ++D K++ DL
Sbjct: 7 KYDRQLRIWGELGQSALETASICLLNCGPTGSEALKNLVIGGIGSITIVDGSKVEIGDLG 66
Query: 315 SQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDEL---PDSFFTEFDVVCATGL 485
+ F+ +G +RA+ + LN V + D L SFF++F +V AT L
Sbjct: 67 NNFMVDAKSVGQSRAKTVCGFLQELNDSVKANFVEENPDTLISTDPSFFSQFTLVIATQL 126
Query: 486 KQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 599
++ +++ CR++N + +G G++ + +H
Sbjct: 127 VEDSMVKLDRICREANVMLVLARSYGLTGFVRISVKEH 164
>At2g21470.2 68415.m02555 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 700
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +3
Query: 174 QKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 353
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL +G +
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRRSHVGQS 66
Query: 354 RAEGSLERARGLNPMVDVTSHTKGV--DELPDSFFTEFDVVCATGLKQEQFER-INNAC 521
+A+ + + P +++ S+ V E FF +FDVV GL R +N C
Sbjct: 67 KAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFFKQFDVV-LNGLDNLDARRHVNRLC 124
>At2g21470.1 68415.m02554 SUMO activating enzyme 2 (SAE2) nearly
identical to SUMO activating enzyme 2 [Arabidopsis
thaliana] GI:22652854; contains Pfam profiles PF00899:
ThiF family, PF02134: Repeat in ubiquitin-activating
(UBA) protein
Length = 625
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = +3
Query: 174 QKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVN 353
Q ++ AKVL++G G+G E+ K + L+G + + ++D + ++ +L QFL +G +
Sbjct: 7 QSAIKGAKVLMVGAGGIGCELLKTLALSGFEDIHIIDMDTIEVSNLNRQFLFRRSHVGQS 66
Query: 354 RAEGSLERARGLNPMVDVTSHTKGV--DELPDSFFTEFDVVCATGLKQEQFER-INNAC 521
+A+ + + P +++ S+ V E FF +FDVV GL R +N C
Sbjct: 67 KAKVARDAVLRFRPNINIRSYHANVKNPEFDVDFFKQFDVV-LNGLDNLDARRHVNRLC 124
>At5g19180.1 68418.m02284 ubiquitin activating enzyme, putative
(ECR1) identical to putative ubiquitin activating enzyme
E1 [Arabidopsis thaliana] GI:2952433; similar to NEDD8
activating enzyme [Mus musculus] GI:17061821
Length = 454
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/97 (26%), Positives = 58/97 (59%)
Frame = +3
Query: 195 KVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKIGVNRAEGSLE 374
++L+IG GLG E+ K++ L+G +++ ++D ++++ +L QFL + +G +AE + +
Sbjct: 48 RILVIGAGGLGCELLKDLALSGFRNLEVIDMDRIEVTNLNRQFLFRIEDVGKPKAEVAAK 107
Query: 375 RARGLNPMVDVTSHTKGVDELPDSFFTEFDVVCATGL 485
R V++ H +++ F+ +F+++ A GL
Sbjct: 108 RVMERVSGVEIVPHFSRIEDKEIEFYNDFNII-ALGL 143
>At5g37530.1 68418.m04520 thiF family protein similar to SP|P30138
Adenylyltransferase thiF (EC 2.7.7.-) {Escherichia
coli}; contains Pfam profile PF00899: ThiF family
Length = 457
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/80 (27%), Positives = 45/80 (56%)
Frame = +3
Query: 120 EAEAEQYDRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLK 299
E +E R I+ +GL+SQ ++ + V++IGL G+G+ A ++ +GV + L+D +++
Sbjct: 70 EIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVS 129
Query: 300 QIDLYSQFLCPPDKIGVNRA 359
L + +G+ +A
Sbjct: 130 LSSLNRHAVATRADVGIPKA 149
>At1g05350.1 68414.m00542 thiF family protein low similarity to
SP|P30138 Adenylyltransferase thiF (EC 2.7.7.-)
{Escherichia coli}; contains Pfam profile PF00899: ThiF
family
Length = 445
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/92 (23%), Positives = 51/92 (55%)
Frame = +3
Query: 153 RLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCP 332
R+ +D+ +R+R V I+G+ G+G+ A+ + G+ + L D + ++ ++ F
Sbjct: 70 RMGIVDNYERIREFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNRLFF-R 128
Query: 333 PDKIGVNRAEGSLERARGLNPMVDVTSHTKGV 428
PD++G+ + + +++ +NP V + S T +
Sbjct: 129 PDQVGMTKTDAAVQTLAEINPDVVLESFTMNI 160
>At5g55130.1 68418.m06872 molybdenum cofactor synthesis protein 3 /
molybdopterin synthase sulphurylase (CNX5) identical to
SP|Q9ZNW0 Molybdenum cofactor synthesis protein 3
(Molybdopterin synthase sulfurylase) (MPT synthase
sulfurylase) {Arabidopsis thaliana}; contains Pfam
profiles PF00899: ThiF family, PF00581: Rhodanese-like
domain, PF05237: MoeZ/MoeB domain
Length = 464
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/172 (19%), Positives = 74/172 (43%), Gaps = 3/172 (1%)
Frame = +3
Query: 114 LSEAEAEQYDRQIRL--WGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVKSVCLLDN 287
LS + +Y RQ+ L + ++ Q L + VL+IG GLG+ + GV + ++D+
Sbjct: 64 LSPDQIYRYSRQLLLPSFAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDH 123
Query: 288 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGV-DELPDSFFTEFD 464
+ ++ +++ Q + IG + + + R +N + V + + + +++D
Sbjct: 124 DVVELNNMHRQIIHTEAFIGHPKVKSAAAACRSINSTIKVDEYVEALRTSNALEILSQYD 183
Query: 465 VVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSXGDC 620
++ I++ C K + G G G L + ++ G C
Sbjct: 184 IIVDATDNPPSRYMISDCCVLLGKPLVSGAALGMEG----QLTVYNHNGGPC 231
>At1g05180.2 68414.m00521 auxin-resistance protein AXR1 (AXR1)
identical to SP|P42744 Auxin-resistance protein AXR1
{Arabidopsis thaliana}; contains Pfam profile PF00899:
ThiF family; identical to cDNA ubiquitin activating
enzyme E1-related protein (AXR1) GI:304103
Length = 436
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +3
Query: 429 DELPDSFFTEFDVVCATGLKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDH 599
++ P+ FFT +V AT L ++ +++ CRD+N K + +G G++ + +H
Sbjct: 23 NQKPNLFFT---LVIATQLVEDSMLKLDRICRDANVKLVLVRSYGLAGFVRISVKEH 76
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 141 DRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 275
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 239 DKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVC 284
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 141 DRQIRLWGLDSQKRLRAAKVLIIGLSGLGAEIAKNVILTGVK-SVC 275
D+Q++ W L+ K +R+ + G+ L +V+LTG + SVC
Sbjct: 233 DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVC 278
>At1g63020.1 68414.m07117 DNA-directed RNA polymerase alpha subunit
family protein low similarity to RNA polymerase IIA
largest subunit [Trypanosoma brucei] GI:162215; contains
InterPro accession IPR000722: RNA polymerase, alpha
subunit
Length = 1453
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 213 LSGLGAEIAKNVILTGVKSVCLLDNEKLKQIDLYSQFLCPPDKI 344
L LG + L V+ C L+ +++Q+ +Y F PP I
Sbjct: 486 LLSLGQDSLTAAYLVNVEKNCYLNRAQMQQLQMYCPFQLPPPAI 529
>At2g06120.1 68415.m00672 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 473
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 483 LKQEQFERINNACRDSNKKFICGDVWGTYGYMFSDLVDHEYSXG 614
L + F+ +N +D +KK+ +G YG SD+ ++E G
Sbjct: 286 LMENGFKSMNKRMKDFSKKYEDTGTYGAYGSKESDVRENELDEG 329
>At5g45300.1 68418.m05561 glycosyl hydrolase family 14 protein
similar to beta-amylase GI:13560977 from [Castanea
crenata]
Length = 689
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 288 EKLKQIDLYSQFLCPPDKIGVNRAEGSLERARGLNPMVDVTSHTKGVDELPDSFFTEFD 464
E LK+ + +F+CP ++ N E +L GL+ V + KG+ ++ T FD
Sbjct: 572 ETLKKYSVTVKFVCPGPQMSPNAHEEALADPEGLSWQVINAAWDKGLQIGGENAITCFD 630
>At5g05740.2 68418.m00632 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 527
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 156 LWGLDSQKRLRAAKVLIIGLSGLGAEIA 239
+WG + RL A + ++GLS L +++A
Sbjct: 439 IWGRKTATRLTGASIALLGLSALFSDVA 466
>At5g05740.1 68418.m00631 peptidase M50 family protein /
sterol-regulatory element binding protein (SREBP) site 2
protease family protein contains Pfam PF02163:
Sterol-regulatory element binding protein (SREBP) site 2
protease
Length = 556
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 156 LWGLDSQKRLRAAKVLIIGLSGLGAEIA 239
+WG + RL A + ++GLS L +++A
Sbjct: 468 IWGRKTATRLTGASIALLGLSALFSDVA 495
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,172,024
Number of Sequences: 28952
Number of extensions: 280936
Number of successful extensions: 883
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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