Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1078
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.59
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 25 0.79
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 1.8
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 4.2
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.7
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 25.0 bits (52), Expect = 0.59
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 296 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 391
+VT+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 protein.
Length = 980
Score = 24.6 bits (51), Expect = 0.79
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = +1
Query: 412 GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRTVSPTPCPSTRDTHSP 591
GQ DP+ V + H+ HP +A R Y+ G R+ PCPS +
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA---DCRMYYMCE-GERK--HHMPCPSNLVFNPD 956
Query: 592 TPSCVW 609
C W
Sbjct: 957 QNVCDW 962
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 547 VSPTPCPSTRDTHSPTPSCVWTWPGRDLTDYLMKILTERGY 669
V P P P T P+ + P RDLT L T+ GY
Sbjct: 390 VEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTL---CTKAGY 427
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 265 PDPQIPHRTRNRH 303
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 380 RGVPRGRHAAHCRRYDAKSSP 318
RG P AA C + KS P
Sbjct: 33 RGTPLAMLAAQCNKLSNKSPP 53
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 MPNLLHVIPVSDDSVFD 284
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 MPNLLHVIPVSDDSVFD 284
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 MPNLLHVIPVSDDSVFD 284
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 334 MPNLLHVIPVSDDSVFD 284
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 608 QTQDGVGECVSLVDGH 561
Q+ D +G C S+ D H
Sbjct: 652 QSDDNLGSCGSMGDAH 667
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 608 QTQDGVGECVSLVDGH 561
Q+ D +G C S+ D H
Sbjct: 544 QSDDNLGSCGSMGDAH 559
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,328
Number of Sequences: 336
Number of extensions: 4420
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -