Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1075
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   6.0  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 10  VLPGGGWKEPATQDTSPVSLSRLLRMPNKESRTR 111
           +L   GW E    +TS +   R L    KE +TR
Sbjct: 18  ILISVGWWENFVSETSYLPFIRALGKSKKEFKTR 51


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 10  VLPGGGWKEPATQDTSPVSLSRLLRMPNKESRTR 111
           +L   GW E    +TS +   R L    KE +TR
Sbjct: 251 ILISVGWWENFVSETSYLPFIRALGKSKKEFKTR 284


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 10  VLPGGGWKEPATQDTSPVSLSRLLRMPNKESRTR 111
           +L   GW E    +TS +   R L    KE +TR
Sbjct: 251 ILISVGWWENFVSETSYLPFIRALGKSKKEFKTR 284


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 2   PGASFRVADGRNPR 43
           P + FRV DG NP+
Sbjct: 338 PASRFRVEDGFNPQ 351


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = -1

Query: 183 KFYSTRHSRFPAEAT*NNLYHGNKPGP-RLLIGHSE*PRQGNW 58
           +F   +H  F  + T NN  +GN+ G  R+ +      R   W
Sbjct: 473 RFTHLQHQPFTYKITVNNQSNGNRKGTCRIFLAPKTDERGNPW 515


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,170
Number of Sequences: 336
Number of extensions: 3692
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)