Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1074
         (800 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   2.1  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   3.6  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   3.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    24   4.8  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   6.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    24   6.3  
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   8.3  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 21   SRDIKDILMVCWSYRAADRPDFPSLLNT 104
            S D+  IL+ CW   A  RP F  L  T
Sbjct: 1062 SLDVYCILLSCWVLDADARPTFKQLAET 1089


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 563 DINLK*LEFIKNIKLY*SSFXLVCLGI 643
           D+  + + F +   LY SSF L+C+ +
Sbjct: 118 DLMCRVMAFFRTFGLYLSSFILICISV 144


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 563 DINLK*LEFIKNIKLY*SSFXLVCLGI 643
           D+  + + F +   LY SSF L+C+ +
Sbjct: 118 DLMCRVMAFFRTFGLYLSSFILICISV 144


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 188  RKTSPVQLAGLRTLSAVGAEIRR 256
            R+T  +Q AGLRTL   G E++R
Sbjct: 1598 RRTMTLQ-AGLRTLHEAGPELKR 1619


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -3

Query: 249 ISAPTALSVRSPASCTGEVFLRRPSQRTWTGARGGMESAPVSSWE 115
           + APT  +   P+S     ++   +        GG+E  P++SW+
Sbjct: 597 LPAPTPRNNYKPSSAAAAPYVLPRASEVNDFFYGGLEPVPLASWQ 641


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 601 DILNKFQLFQVDINRNCLRQILKQLFSYIDHYAQFQSGSI 482
           DI N+F+   VD+ R     +L++L + + ++  F+  ++
Sbjct: 73  DIRNRFKDSDVDVTRKDGILLLRELAAEVKNFMDFKMNAV 112


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = +1

Query: 160 CPGPLTRSSEEDLPSATRRTSDA--QCSRCRNTSPSRSIYEV 279
           CP    R ++  +      T+D   +C RC +T P R  Y++
Sbjct: 303 CPTTCGRKTDLRIHVQNLHTADKPIKCKRCDSTFPDRYSYKM 344


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 660 KQTIGCIPKHTRXKLLQYNLIFLINSNYFK 571
           + T G I    +  LLQ  L+ LIN+ YFK
Sbjct: 173 QNTRGKIQSIIKPDLLQDALMMLINTIYFK 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,915
Number of Sequences: 2352
Number of extensions: 17156
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)