Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1069
(468 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 243 2e-63
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 235 4e-61
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 189 2e-47
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 183 2e-45
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 180 1e-44
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 179 3e-44
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 165 3e-40
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 162 4e-39
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 153 2e-36
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 128 5e-29
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 123 2e-27
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 101 8e-21
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 101 1e-20
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 97 1e-19
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 95 5e-19
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 91 1e-17
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 91 1e-17
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 87 1e-16
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 83 3e-15
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 83 4e-15
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 81 2e-14
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 76 4e-13
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 75 8e-13
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 72 5e-12
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 71 1e-11
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 69 4e-11
UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 54 2e-06
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 52 5e-06
UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6; Bacteri... 52 6e-06
UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa s... 47 2e-04
UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candida... 47 2e-04
UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3; Mycopla... 47 2e-04
UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8; Gammapr... 47 2e-04
UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex... 46 4e-04
UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14; Campyl... 44 0.001
UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11; Epsilo... 44 0.002
UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5; Proteob... 44 0.002
UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellula... 44 0.002
UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultu... 42 0.005
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 42 0.005
UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 42 0.009
UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11; Bacter... 42 0.009
UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of str... 41 0.012
UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1; Thiomic... 41 0.012
UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5; Bacteri... 41 0.012
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 41 0.016
UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7; Bacteri... 41 0.016
UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellula... 40 0.021
UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4; Bacteri... 40 0.036
UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9; Bacteri... 40 0.036
UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3; Bacteri... 39 0.047
UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1; Leptosp... 39 0.047
UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130; Bacte... 39 0.047
UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8; Ma... 38 0.11
UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4; Plancto... 38 0.11
UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9; Rickett... 38 0.11
UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit... 38 0.14
UniRef50_Q03246 Cluster: Mitochondrial 37S ribosomal protein S17... 38 0.14
UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22; Bacter... 38 0.14
UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellula... 38 0.14
UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12; Bacter... 37 0.19
UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast ... 37 0.19
UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17; ... 37 0.19
UniRef50_Q755H9 Cluster: AFL156Wp; n=2; Saccharomycetaceae|Rep: ... 37 0.25
UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2; Bacte... 37 0.25
UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2; Alphapr... 36 0.33
UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19; Alphap... 36 0.33
UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52; Bacter... 36 0.44
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 36 0.44
UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16; Gammap... 35 0.77
UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19; Bacter... 35 0.77
UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144; Bacte... 35 1.0
UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;... 33 2.4
UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3; Rhodoba... 33 2.4
UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983... 33 2.4
UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellu... 33 2.4
UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14; Bacter... 33 2.4
UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17; ... 33 2.4
UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2; Proteob... 33 3.1
UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;... 33 4.1
UniRef50_Q46IR8 Cluster: 30S ribosomal protein S17; n=3; Prochlo... 33 4.1
UniRef50_P23404 Cluster: Cyanelle 30S ribosomal protein S17; n=1... 33 4.1
UniRef50_A7CUU5 Cluster: Ribosomal protein S17; n=1; Opitutaceae... 32 5.4
UniRef50_Q00UW4 Cluster: 30S RIBOSOMAL PROTEIN S17; n=2; Ostreoc... 32 5.4
UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18; Bacter... 32 5.4
UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin CG... 32 7.2
UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-... 32 7.2
UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1; D... 32 7.2
UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22; Alphap... 32 7.2
UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n... 31 9.5
UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Re... 31 9.5
UniRef50_A3DH51 Cluster: Amidohydrolase; n=1; Clostridium thermo... 31 9.5
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 9.5
UniRef50_A4IBS3 Cluster: 30S Ribosomal protein S17-like protein;... 31 9.5
UniRef50_Q7U4J1 Cluster: 30S ribosomal protein S17; n=6; Synecho... 31 9.5
UniRef50_P16180 Cluster: 30S ribosomal protein S17, chloroplast ... 31 9.5
UniRef50_Q758N2 Cluster: Autophagy-related protein 13; n=1; Erem... 31 9.5
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 243 bits (594), Expect = 2e-63
Identities = 109/127 (85%), Positives = 122/127 (96%)
Frame = +2
Query: 44 RKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 223
+K +R +K+VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR
Sbjct: 67 KKPLRRYKSVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 126
Query: 224 DYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGKG 403
DYLHY+ KYNRFEKRH+NMSVHLSPCFRDVEIGD+VT+GECRPLSKTVRFNVLKV+KG G
Sbjct: 127 DYLHYVRKYNRFEKRHKNMSVHLSPCFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKGTG 186
Query: 404 SQEVFEK 424
+++ F+K
Sbjct: 187 AKKAFKK 193
Score = 32.7 bits (71), Expect = 4.1
Identities = 15/24 (62%), Positives = 20/24 (83%), Gaps = 2/24 (8%)
Frame = +2
Query: 35 GMKRKD--MRHHKNVGLGFKTPRE 100
G+K+K +R+ +NVGLGFKTPRE
Sbjct: 24 GVKKKANALRYIRNVGLGFKTPRE 47
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 235 bits (575), Expect = 4e-61
Identities = 106/128 (82%), Positives = 120/128 (93%)
Frame = +2
Query: 41 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 220
K K R++KN+GLGFKTP+EAIEGTYIDKKCPFTGNVSIRGRIL+GVV KMKMQRTIVIR
Sbjct: 30 KEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTGNVSIRGRILSGVVTKMKMQRTIVIR 89
Query: 221 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGK 400
RDYLHY+ KYNRFEKRH+NMSVHLSPCFRDV+IGDIVT+GECRPLSKTVRFNVLKV+K
Sbjct: 90 RDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAA 149
Query: 401 GSQEVFEK 424
G+++ F+K
Sbjct: 150 GTKKQFQK 157
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 189 bits (461), Expect = 2e-47
Identities = 85/120 (70%), Positives = 102/120 (85%)
Frame = +2
Query: 44 RKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 223
++ R +KN GLGFKTP+ AIEG+YIDKKCPFTG VSIRG+ILTG V KM RTIVIRR
Sbjct: 29 KRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIRGKILTGTVVSTKMHRTIVIRR 88
Query: 224 DYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGKG 403
YLHY+PKYNR+EKRH+N+ VH+SP FR V++GDIVT+G+CRP+SKTVRFNV+KVS G
Sbjct: 89 AYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVGQCRPISKTVRFNVVKVSAAAG 147
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 183 bits (445), Expect = 2e-45
Identities = 82/114 (71%), Positives = 95/114 (83%)
Frame = +2
Query: 47 KDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRD 226
K +R+ K VGLGFK P++AIEG YIDKKCPFTGNVS+RG IL G+V KM RTI+IRRD
Sbjct: 59 KGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGNVSVRGAILKGIVISTKMTRTIIIRRD 118
Query: 227 YLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 388
YLHY+ KYNR+EKRHRN+ VH+SP F V+ GDIV G+CRPLSKTVRFNVLKV
Sbjct: 119 YLHYVAKYNRYEKRHRNVPVHISPAFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 180 bits (439), Expect = 1e-44
Identities = 81/123 (65%), Positives = 99/123 (80%)
Frame = +2
Query: 56 RHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 235
R +K+VGLGFKTP EAI G Y+DKKCPF G VSIRGRILTG V KM RTI+IRR+YLH
Sbjct: 30 RWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLH 89
Query: 236 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGKGSQEV 415
++PKYNR+EKRH+N++ H+SP FR + GD+VT+G+CRPLSKTVRFNVL+V K +
Sbjct: 90 FIPKYNRYEKRHKNLAAHVSPAFR-INEGDVVTVGQCRPLSKTVRFNVLRVVKHTEGPKQ 148
Query: 416 FEK 424
F K
Sbjct: 149 FGK 151
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 179 bits (435), Expect = 3e-44
Identities = 83/128 (64%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Frame = +2
Query: 38 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKM-KMQRTIV 214
+K+ D R+ + VGLG+KTP+ A+EGT++D KCPFTGNVSIRGRIL GVV KM+RT+V
Sbjct: 29 LKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGNVSIRGRILRGVVVSAGKMKRTVV 88
Query: 215 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSK 394
+RR+YLHY+ KY R+EKRH N SVH SP DV+ GD VT+GECRPLSKTVRFNVLKV
Sbjct: 89 VRRNYLHYIQKYKRYEKRHTNFSVHCSPAL-DVKEGDTVTVGECRPLSKTVRFNVLKVHG 147
Query: 395 GKGSQEVF 418
K +VF
Sbjct: 148 SKKGSKVF 155
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 165 bits (402), Expect = 3e-40
Identities = 72/119 (60%), Positives = 91/119 (76%)
Frame = +2
Query: 38 MKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVI 217
+ +K KN+G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++I
Sbjct: 16 LTKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVII 75
Query: 218 RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSK 394
RRDYLH++ KY RFEKRH+N+ H SPCFR V+ GD+VTIG+CRPLSKT+RFNVL++ K
Sbjct: 76 RRDYLHWISKYKRFEKRHKNIPCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRIDK 133
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 162 bits (393), Expect = 4e-39
Identities = 73/132 (55%), Positives = 98/132 (74%)
Frame = +2
Query: 41 KRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 220
K +R+ K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM RTI+IR
Sbjct: 11 KSGHIRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIR 70
Query: 221 RDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGK 400
R+YLH++ KY R++KRH++++VH SP F D + GD V IG+CRPLSKT+R+NVL+V
Sbjct: 71 RNYLHFIKKYQRYQKRHKSLAVHCSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEVVSKS 129
Query: 401 GSQEVFEKIXIN 436
+ ++ +K N
Sbjct: 130 SADKMGKKFAKN 141
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 153 bits (371), Expect = 2e-36
Identities = 83/147 (56%), Positives = 97/147 (65%), Gaps = 25/147 (17%)
Frame = +2
Query: 23 TGKGGMKRKD-MRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKM 199
+GKG K R K++GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI+ G KM
Sbjct: 22 SGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKM 81
Query: 200 QRTIVIRRDYLHYLPKYN------------------------RFEKRHRNMSVHLSPCFR 307
RTI++RR+YLH++ KY R+EKRH N+ H+SPCFR
Sbjct: 82 NRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISDLGCRYEKRHSNIPAHVSPCFR 141
Query: 308 DVEIGDIVTIGECRPLSKTVRFNVLKV 388
V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 142 -VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 128 bits (310), Expect = 5e-29
Identities = 63/119 (52%), Positives = 79/119 (66%), Gaps = 3/119 (2%)
Frame = +2
Query: 80 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRF 259
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK ++TIV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 260 EKRHRNMSVHLSPCFRD-VEIGDIVTIGECRPLSKTVRFNVLKVSKG--KGSQEVFEKI 427
+RH N SVH+SPCF + +GD V GE RPLSKT VL K GS +V E I
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETRPLSKTKSSVVLGYIKKALPGSFKVLESI 156
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 123 bits (297), Expect = 2e-27
Identities = 56/90 (62%), Positives = 71/90 (78%)
Frame = +2
Query: 119 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 298
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 299 CFRDVEIGDIVTIGECRPLSKTVRFNVLKV 388
++GDIV I ECRP+SKTVRFNV+KV
Sbjct: 83 LL-TCKVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 101 bits (242), Expect = 8e-21
Identities = 50/113 (44%), Positives = 68/113 (60%)
Frame = +2
Query: 50 DMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDY 229
+ R K++GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 4 EYRMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREY 59
Query: 230 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 388
Y KY R+E+R + H PC D + GD V I ECRPLSKT F V++V
Sbjct: 60 YRYDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEV 111
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 101 bits (241), Expect = 1e-20
Identities = 40/88 (45%), Positives = 63/88 (71%)
Frame = +2
Query: 122 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 301
D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+ K+ R+EKR R + HL C
Sbjct: 19 DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYMQKFERYEKRTRRYAAHLPSC 78
Query: 302 FRDVEIGDIVTIGECRPLSKTVRFNVLK 385
DV +GD V I ECRPLSKT+ F V++
Sbjct: 79 IGDVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 97.5 bits (232), Expect = 1e-19
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +2
Query: 29 KGGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRT 208
+G K R KN+GLGFKTPREAI+G Y+DKKCPFTG VSIRGRIL + + +MQ T
Sbjct: 33 EGKRPGKVERFWKNIGLGFKTPREAIDGAYVDKKCPFTGTVSIRGRILVWYLPQCEMQST 92
Query: 209 IVIRRDYLHYL 241
I++ RDYLH++
Sbjct: 93 IIVARDYLHFV 103
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 95.5 bits (227), Expect = 5e-19
Identities = 47/112 (41%), Positives = 63/112 (56%)
Frame = +2
Query: 65 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 244
+++GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 245 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGK 400
KY R+EKR + H C ++GDIVTI ECRP+SKT F V+K K
Sbjct: 59 KYQRYEKRRSKIHAHNPACI-SAKVGDIVTIVECRPISKTKSFVVVKAEVPK 109
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/98 (44%), Positives = 60/98 (61%)
Frame = +2
Query: 71 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 250
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 251 NRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKT 364
+RF KR + H C D+ +GD VTI ECRPLSKT
Sbjct: 59 DRFMKRRSRVPAHAPDCL-DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 91.1 bits (216), Expect = 1e-17
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +2
Query: 122 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 301
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 302 FRDVEIGDIVTIGECRPLSKTVRFNVLKVSK 394
V+ GD+V IGE P+SKTV+F VL V +
Sbjct: 84 I-SVKEGDVVVIGETMPISKTVKFTVLGVKR 113
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 87.4 bits (207), Expect = 1e-16
Identities = 44/106 (41%), Positives = 68/106 (64%)
Frame = +2
Query: 65 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 244
+++G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 245 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 382
KY R+ ++ RN+ HL C + V +GD V IGE RPL+K + F VL
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK-VNVGDYVVIGETRPLAKFISFVVL 132
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 83.0 bits (196), Expect = 3e-15
Identities = 39/107 (36%), Positives = 62/107 (57%)
Frame = +2
Query: 65 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 244
+N+GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y+P
Sbjct: 4 RNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQYIP 59
Query: 245 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 385
KY R + + VH+ C + ++ GD V ECR L+KT+ F +++
Sbjct: 60 KYERKATKIKKYHVHVPDCIK-IKPGDTVRFAECRKLAKTISFVIVE 105
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 82.6 bits (195), Expect = 4e-15
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Frame = +2
Query: 122 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 301
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 302 FRDVEIGDIVTIGECRPLSKTVRFNVL-KVSKG 397
+D++ GD V IGE RPLSKT F VL K+ KG
Sbjct: 76 LKDIKEGDYVLIGETRPLSKTKHFVVLGKLKKG 108
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 80.6 bits (190), Expect = 2e-14
Identities = 39/106 (36%), Positives = 66/106 (62%)
Frame = +2
Query: 65 KNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 244
KN+G+ P ++ D CP+ G++ +R ++L V+K++M + V+ ++LHY+
Sbjct: 4 KNIGIPHVLPPASVCD---DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIR 60
Query: 245 KYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVL 382
KYNR+E+R + M V + C +V+ GD V I E RPLSKT+ + V+
Sbjct: 61 KYNRYERRRKRMRVRVPECI-EVKPGDKVIIAETRPLSKTIAWVVI 105
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 75.8 bits (178), Expect = 4e-13
Identities = 41/108 (37%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Frame = +2
Query: 65 KNVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 241
+++G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 242 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLK 385
KY R ++ + + PC + +IGDI+TI ECRPL+K F V++
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCM-EAKIGDIITIAECRPLNKGSSFVVIE 104
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 74.9 bits (176), Expect = 8e-13
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +2
Query: 275 NMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKVSKGKGSQEVFEK 424
NMS+H S CFRDV IG IVT+GEC+PLSKTVRF + KV+K G+++ F+K
Sbjct: 34 NMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKVTKAVGTKKQFQK 83
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 72.1 bits (169), Expect = 5e-12
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = +2
Query: 122 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 301
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 302 FRDVEIGDIVTIGECRPLSKTVRFNVL 382
V+ GD V + E RPL+K+V F V+
Sbjct: 81 I-PVKPGDEVIVAETRPLAKSVSFVVI 106
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Frame = +2
Query: 65 KNVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 241
+ +GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 242 PKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 388
K+ R+ + + H+ P DV GD V ECRP++K+V F V++V
Sbjct: 60 TKFKRYARGRSRIHAHV-PSNIDVREGDRVLAAECRPVAKSVSFVVVEV 107
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 69.3 bits (162), Expect = 4e-11
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = -3
Query: 421 FKDFLRALAL*-NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIVF 245
F++FL + + NFQNIES+ F S + NIT + E+ R + +I V F ++F
Sbjct: 49 FREFLGSRSTSRNFQNIESDSFRNWSTLTNGDNITFFN-SESWRDVGSNILVSFFVSVIF 107
Query: 244 G*VVKVIAADHDSSLHLHFLNDAGEDAAADRNVTSEGTLLVNVGTLNRLSGSFE 83
V++VI++D+D ++H N G+D +D N TSE T VNV T N FE
Sbjct: 108 WNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNVRTFNGSFWGFE 161
>UniRef50_P38519 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Thermotoga
maritima
Length = 107
Score = 53.6 bits (123), Expect = 2e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
LTG+V KM +T+V+ + L P Y ++ KR + H + +IGD+V I E R
Sbjct: 6 LTGIVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDER--NECKIGDVVEIEETR 63
Query: 350 PLSKTVRFNVLKV 388
PLSKT R+ V+++
Sbjct: 64 PLSKTKRWRVVRI 76
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 52.4 bits (120), Expect = 5e-06
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
+I+TG V M +TI + D L PKY++F ++ R H + EIGDIV I E
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDEN--NECEIGDIVEIEE 61
Query: 344 CRPLSKTVRFNVLK--VSKGKGSQEV 415
R LSKT F VLK V K S+EV
Sbjct: 62 SRKLSKTKAF-VLKRIVRKNILSEEV 86
>UniRef50_P24321 Cluster: 30S ribosomal protein S17; n=6;
Bacteria|Rep: 30S ribosomal protein S17 - Thermus
thermophilus
Length = 105
Score = 52.0 bits (119), Expect = 6e-06
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
++LTGVV KMQ+T+ ++ R + H P Y + KR + H P ++GD+V I
Sbjct: 4 KVLTGVVVSDKMQKTVTVLVERQFPH--PLYGKVIKRSKKYLAH-DP-EEKYKLGDVVEI 59
Query: 338 GECRPLSKTVRFNVLKVSKGKGSQEVFEKIXI 433
E RP+SK RF VL++ + G ++ EK I
Sbjct: 60 IESRPISKRKRFRVLRLVE-SGRMDLVEKYLI 90
>UniRef50_A7BRH2 Cluster: Ribosomal protein S17; n=1; Beggiatoa sp.
PS|Rep: Ribosomal protein S17 - Beggiatoa sp. PS
Length = 100
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/67 (38%), Positives = 35/67 (52%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R L G V KM +TI + PKY ++ KR + VH ++GDIV I +
Sbjct: 21 RTLIGQVVSDKMHKTITVLVSRKIKHPKYGKYIKRSTKLHVHDEE--NTCQVGDIVAISQ 78
Query: 344 CRPLSKT 364
CRP+SKT
Sbjct: 79 CRPISKT 85
>UniRef50_Q7WZS8 Cluster: 30S ribosomal protein S17; n=1; Candidatus
Portiera aleyrodidarum|Rep: 30S ribosomal protein S17 -
Candidatus Portiera aleyrodidarum
Length = 83
Score = 46.8 bits (106), Expect = 2e-04
Identities = 29/81 (35%), Positives = 44/81 (54%)
Frame = +2
Query: 152 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 331
+I+ R + G V KM +TIV+ + L Y ++ KR + +SVH S EIGDIV
Sbjct: 4 NIKVRKIKGKVVSNKMNKTIVVLIERLFKHKTYGKYIKRSKKLSVHDSK--NKAEIGDIV 61
Query: 332 TIGECRPLSKTVRFNVLKVSK 394
E +SKT + ++K+ K
Sbjct: 62 ECAESLKISKTKSWILIKILK 82
>UniRef50_Q6KI46 Cluster: 30S ribosomal protein S17; n=3;
Mycoplasma|Rep: 30S ribosomal protein S17 - Mycoplasma
mobile
Length = 92
Score = 46.8 bits (106), Expect = 2e-04
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +2
Query: 158 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
R + LTGVV K +TIV+ D P Y + K + + H + ++GDIV I
Sbjct: 7 RRKALTGVVVSDKSSKTIVVAVDTFKKDPLYQKRFKSTKKFAAHDEK--EEAQMGDIVKI 64
Query: 338 GECRPLSKTVRFNVLKV----SKGKGSQ 409
RPLSKT F + K+ +GKGS+
Sbjct: 65 VGTRPLSKTKFFRLEKIRQRAKEGKGSE 92
>UniRef50_Q7VQD9 Cluster: 30S ribosomal protein S17; n=8;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Blochmannia floridanus
Length = 85
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +2
Query: 167 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 346
+L G+V + KMQ++IV+ + + Y +F R + VH + +V GDIV I EC
Sbjct: 7 VLQGIVIRSKMQKSIVVSINRIVKHSMYKKFINRTTKIYVHDTNNISNV--GDIVEITEC 64
Query: 347 RPLSKTVRFNVLKVSK 394
RP+SKT + + + K
Sbjct: 65 RPISKTKCWKLTSIIK 80
>UniRef50_O66439 Cluster: 30S ribosomal protein S17; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S17 - Aquifex
aeolicus
Length = 107
Score = 46.0 bits (104), Expect = 4e-04
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
L GVV KM +T+V++ D P Y + + + H + +GDIV I E R
Sbjct: 17 LVGVVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDE--HNECRVGDIVMIRETR 74
Query: 350 PLSKTVRFNVLKV-SKGKGSQEVFEK 424
PLSKT R+ V+K+ + + +E +K
Sbjct: 75 PLSKTKRWVVVKILQRARRPEEEIQK 100
>UniRef50_Q9PLY0 Cluster: 30S ribosomal protein S17; n=14;
Campylobacterales|Rep: 30S ribosomal protein S17 -
Campylobacter jejuni
Length = 83
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 164 RILTGVVQKMKMQRT--IVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
R + GVV K+ ++T +++ R +H P+Y + KR + +H +V++GD V
Sbjct: 5 REIQGVVVKIAGEKTASVLVERKVVH--PRYRKIVKRFKKYLIHDER--NEVKVGDTVVA 60
Query: 338 GECRPLSKTVRFNVLKV 388
ECRPLSK F + V
Sbjct: 61 VECRPLSKRKSFRLKSV 77
>UniRef50_Q7M8E2 Cluster: 30S ribosomal protein S17; n=11;
Epsilonproteobacteria|Rep: 30S ribosomal protein S17 -
Wolinella succinogenes
Length = 88
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/78 (35%), Positives = 42/78 (53%)
Frame = +2
Query: 155 IRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 334
I+G+++T K TI++ R H PKY + KR + VH V++GD++
Sbjct: 11 IQGKVVTKAGDKSV---TILVERRVTH--PKYRKIVKRFKKYIVHDES--NAVKVGDMIE 63
Query: 335 IGECRPLSKTVRFNVLKV 388
ECRPLSK F++ KV
Sbjct: 64 AIECRPLSKRKSFSLHKV 81
>UniRef50_Q5FTZ2 Cluster: 30S ribosomal protein S17; n=5;
Proteobacteria|Rep: 30S ribosomal protein S17 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 90
Score = 44.0 bits (99), Expect = 0.002
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R+LTG V KM +T+ + D P Y +F +R + + H + GD+V I E
Sbjct: 4 RVLTGRVTSDKMDKTVTVLLDRRIMHPLYKKFIRRSKKYAAHDEE--NVCQTGDLVRIEE 61
Query: 344 CRPLSKTVRFNVL 382
C P+SK ++V+
Sbjct: 62 CAPISKRKTWSVV 74
>UniRef50_Q3ZZL5 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 -
Dehalococcoides sp. (strain CBDB1)
Length = 90
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 149 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 328
+ I+ + G V KM++TIV+ D + P Y + +R VH + +IGD+
Sbjct: 1 MEIKNKTRIGHVISDKMEKTIVVGIDVVKRHPLYKKTYRRTMKYLVHDEK--NEAKIGDM 58
Query: 329 VTIGECRPLSKTVRFNVLK-VSKG 397
+ I ECRP+SK + + K ++KG
Sbjct: 59 IEIVECRPISKGKYWRLSKIITKG 82
>UniRef50_Q6SG39 Cluster: 30S ribosomal protein S17; n=1; uncultured
bacterium 562|Rep: 30S ribosomal protein S17 -
uncultured bacterium 562
Length = 95
Score = 42.3 bits (95), Expect = 0.005
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = +2
Query: 152 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 331
S RIL+GVV K +TI ++ + P Y + KR + H IGD V
Sbjct: 3 STNPRILSGVVISDKADKTITVKIERKVKHPLYGKVMKRATKVHAHDEN--NSAAIGDQV 60
Query: 332 TIGECRPLSKT 364
T+ ECRP SK+
Sbjct: 61 TVKECRPFSKS 71
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 42.3 bits (95), Expect = 0.005
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIV-IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 340
+ L G+V + + +V + Y H L RF+KR + + H E+GD V I
Sbjct: 20 KTLQGIVIRTSPKTIMVEVETAYKHKLYA-KRFKKR-KKFNTHDEKNL--AEVGDFVKIA 75
Query: 341 ECRPLSKTVRFNVLKVSKGKG 403
ECRP+SKT F +++V + KG
Sbjct: 76 ECRPISKTKHFRLVEVLQKKG 96
>UniRef50_Q67JV2 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 -
Symbiobacterium thermophilum
Length = 94
Score = 41.5 bits (93), Expect = 0.009
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
GVV KM +T+V+ + L P Y + +R + H ++GD V I E RPL
Sbjct: 13 GVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDE--HNQCKVGDKVRIMETRPL 70
Query: 356 SKTVRFNVLKV 388
SK R+ V+++
Sbjct: 71 SKEKRWRVVEI 81
>UniRef50_Q9Z7R6 Cluster: 30S ribosomal protein S17; n=11;
Bacteria|Rep: 30S ribosomal protein S17 - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 86
Score = 41.5 bits (93), Expect = 0.009
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
++ GVV KM++T+V+R + + P+Y + + + H V GD V I E
Sbjct: 10 KVKIGVVVSAKMEKTVVVRVERIFSHPQYLKVVRSSKKYYAHTE---LKVSEGDKVKIQE 66
Query: 344 CRPLSKTVRFNVLK 385
RPLSK R+ V++
Sbjct: 67 TRPLSKLKRWRVIE 80
>UniRef50_Q6CCN7 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 232
Score = 41.1 bits (92), Expect = 0.012
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 158 RGR-ILTGVVQKM--KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 328
RGR GVV ++ K ++I +R Y+P + HR+ H + GD+
Sbjct: 9 RGRQSFVGVVTRLGPKGSKSIKVRVTRRKYMPAILKEINFHRDFYTHDE--MMACQEGDV 66
Query: 329 VTIGECRPLSKTVRFNVLKVSKGKGSQ 409
V I +CRP+SKT F V ++ +G +
Sbjct: 67 VRIEQCRPISKTKHFAVAEIKSAQGQE 93
>UniRef50_Q31IX3 Cluster: 30S ribosomal protein S17; n=1;
Thiomicrospira crunogena XCL-2|Rep: 30S ribosomal
protein S17 - Thiomicrospira crunogena (strain XCL-2)
Length = 87
Score = 41.1 bits (92), Expect = 0.012
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +2
Query: 158 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
+ R + GVV M +++V+ + PKY +F ++ + H + +GD VTI
Sbjct: 7 KARTMQGVVVSNGMDKSVVVMTNRYIKHPKYKKFVRKSTKVMAHDAD--NACGVGDRVTI 64
Query: 338 GECRPLSKTVRFNVLKVSK 394
EC P SK ++++ + +
Sbjct: 65 SECTPFSKRKTWSLVSIDE 83
>UniRef50_Q1ISB3 Cluster: 30S ribosomal protein S17; n=5;
Bacteria|Rep: 30S ribosomal protein S17 - Acidobacteria
bacterium (strain Ellin345)
Length = 101
Score = 41.1 bits (92), Expect = 0.012
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
L G+V KMQ+TIV++ + Y R R + H + IGD V I E R
Sbjct: 16 LIGLVVSTKMQKTIVVQVERQKSHAMYGRVISRRKRFYAHDEE--QTAHIGDYVRIEETR 73
Query: 350 PLSKTVRFNVLKV 388
PLSK R+ + +V
Sbjct: 74 PLSKLKRWKLAEV 86
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 40.7 bits (91), Expect = 0.016
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 161 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S F GD V I
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENF--CVTGDKVVI 81
Query: 338 GECRPLSKTVRFNVLKVSK 394
P+S + V + K
Sbjct: 82 KSMLPISTMKHYYVRNIVK 100
>UniRef50_Q92QG1 Cluster: 30S ribosomal protein S17; n=7;
Bacteria|Rep: 30S ribosomal protein S17 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 78
Score = 40.7 bits (91), Expect = 0.016
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
RIL G V K +T+V+R + P + +R + H ++GD+V+I E
Sbjct: 4 RILQGTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDEN--NQFKVGDLVSIEE 61
Query: 344 CRPLSKTVRFNVL 382
C P+SK R+ V+
Sbjct: 62 CAPISKDKRWTVV 74
>UniRef50_Q7MTM2 Cluster: 30S ribosomal protein S17; n=2; cellular
organisms|Rep: 30S ribosomal protein S17 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 84
Score = 40.3 bits (90), Expect = 0.021
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
GVV KM +TI + + P Y +F + + H + IGD V I E RPL
Sbjct: 11 GVVSSNKMDKTITVAVKWKEKHPIYGKFVNKTKKYHAHDEK--NECGIGDTVRIMETRPL 68
Query: 356 SKTVRFNVLKV 388
S+T R+ + ++
Sbjct: 69 SRTKRWRLTEI 79
>UniRef50_Q50309 Cluster: 30S ribosomal protein S17; n=4;
Bacteria|Rep: 30S ribosomal protein S17 - Mycoplasma
pneumoniae
Length = 85
Score = 39.5 bits (88), Expect = 0.036
Identities = 23/75 (30%), Positives = 37/75 (49%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
++L G+V+ K +T ++ + P Y++ RH+ H + GD V I E
Sbjct: 7 KVLIGIVKSTKNAKTATVQVESRFKHPLYHKSVVRHKKYQAHNEGEVL-AKDGDKVQIVE 65
Query: 344 CRPLSKTVRFNVLKV 388
RPLS T RF + K+
Sbjct: 66 TRPLSATKRFRIAKI 80
>UniRef50_Q8FS73 Cluster: 30S ribosomal protein S17; n=9;
Bacteria|Rep: 30S ribosomal protein S17 -
Corynebacterium efficiens
Length = 92
Score = 39.5 bits (88), Expect = 0.036
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
++ TG V KMQ+TIV+ + Y++ + ++ + H IGD+V I E
Sbjct: 15 KVRTGYVVSDKMQKTIVVELEDRKQHALYSKILRTNKKVKAHDEENIAG--IGDLVRIEE 72
Query: 344 CRPLSKTVRFNVLKV 388
RPLSK + ++++
Sbjct: 73 TRPLSKDKNYRLIEI 87
>UniRef50_Q01WA1 Cluster: 30S ribosomal protein S17; n=3;
Bacteria|Rep: 30S ribosomal protein S17 - Solibacter
usitatus (strain Ellin6076)
Length = 102
Score = 39.1 bits (87), Expect = 0.047
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G V KMQ+TIV+ P Y R + + H +GD+V I ECRPL
Sbjct: 16 GEVVSTKMQKTIVVEVSRRVPHPLYKRIIGKRKKFYAHDEE--GRANLGDVVRIIECRPL 73
Query: 356 SKTVRFNVLKVSK 394
SK R+ + + +
Sbjct: 74 SKLKRWRLADIMR 86
>UniRef50_A3EVR2 Cluster: 30S ribosomal protein S17; n=1;
Leptospirillum sp. Group II UBA|Rep: 30S ribosomal
protein S17 - Leptospirillum sp. Group II UBA
Length = 95
Score = 39.1 bits (87), Expect = 0.047
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +2
Query: 176 GVVQKMKMQRTIV--IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
GVV KM +T+V I+R LH P Y++ R + H +E+G +V I R
Sbjct: 20 GVVVGNKMMKTVVVEIQRRVLH--PLYHKVVSRRTRIKAHTQ---EPIEVGSVVEIISTR 74
Query: 350 PLSKTVRFNVLKV 388
P+SK VL+V
Sbjct: 75 PISKDKSHRVLRV 87
>UniRef50_Q5P323 Cluster: 30S ribosomal protein S17; n=130;
Bacteria|Rep: 30S ribosomal protein S17 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 89
Score = 39.1 bits (87), Expect = 0.047
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTI--VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
R L G V KMQ T+ ++ R H L Y + R H+ GD+V I
Sbjct: 10 RALVGRVVSDKMQNTVTVLVERRVKHEL--YGKVITRSAKYHAHVED--GGAAAGDLVEI 65
Query: 338 GECRPLSKTVRFNVLKV 388
ECRP+SKT + V KV
Sbjct: 66 EECRPISKTKSWRVAKV 82
>UniRef50_Q9LHN1 Cluster: 40S ribosomal protein S17-like; n=8;
Magnoliophyta|Rep: 40S ribosomal protein S17-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 105
Score = 37.9 bits (84), Expect = 0.11
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
+ + G V KMQ ++V+ D L + YNR+ KR H IGD V +
Sbjct: 2 KAVIGTVVSNKMQMSVVVAVDRLFHNNIYNRYVKRTSKFMAHDEK--DSCNIGDRVKLDP 59
Query: 344 CRPLSKTVRFNVLKVSK 394
RPLSK + V ++ K
Sbjct: 60 SRPLSKHKHWIVSEIIK 76
>UniRef50_Q7UN11 Cluster: 30S ribosomal protein S17; n=4;
Planctomycetaceae|Rep: 30S ribosomal protein S17 -
Rhodopirellula baltica
Length = 117
Score = 37.9 bits (84), Expect = 0.11
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R++ G+V KM +T + L PKY ++ +R VH + +GD V I E
Sbjct: 4 RVVAGIVTSDKMSKTRRVEIARLVKHPKYKKYIRRRTVCHVHDEN--NESGVGDKVEIIE 61
Query: 344 CRPLSKTVRFNVLKV 388
PLSK R+ +++V
Sbjct: 62 SEPLSKLKRWRLVRV 76
>UniRef50_Q3YRL8 Cluster: 30S ribosomal protein S17; n=9;
Rickettsiales|Rep: 30S ribosomal protein S17 - Ehrlichia
canis (strain Jake)
Length = 83
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
++LTGVV K +TI + + Y + K+ +N VH + + GD+V I E
Sbjct: 13 KVLTGVVVATKCDKTIKVMVSRMVRHKTYKKIVKKRKNYVVHDE--YNKCKCGDVVKIQE 70
Query: 344 CRPLSKTVRFNVL 382
P+S T R+ V+
Sbjct: 71 HIPISATKRWIVI 83
>UniRef50_Q9UUB0 Cluster: Mitochondrial ribosomal protein subunit
S17; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S17 - Schizosaccharomyces
pombe (Fission yeast)
Length = 90
Score = 37.5 bits (83), Expect = 0.14
Identities = 21/71 (29%), Positives = 35/71 (49%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G+V M +T +R + P ++ +++N V + +GD VTI CRP
Sbjct: 7 GIVISRAMPKTAKVRVAKEKFHPVVKKYVTQYQNYMVQDD---LNCNVGDAVTIQPCRPR 63
Query: 356 SKTVRFNVLKV 388
S T RF ++K+
Sbjct: 64 SATKRFEIIKI 74
>UniRef50_Q03246 Cluster: Mitochondrial 37S ribosomal protein S17;
n=4; Saccharomycetales|Rep: Mitochondrial 37S ribosomal
protein S17 - Saccharomyces cerevisiae (Baker's yeast)
Length = 237
Score = 37.5 bits (83), Expect = 0.14
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 158 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH-LSPCFRDVEIGDIVT 334
R L VV + KMQ+T+ +R + + K N+ R+ VH R+ GD+V
Sbjct: 3 RQNFLGLVVSQGKMQKTVKVRVETKVFNKKINKELFHRRDYLVHDEGEISRE---GDLVR 59
Query: 335 IGECRPLSKTVRFNVLKVSKGKGSQ 409
I RPLSK F + ++ + KG Q
Sbjct: 60 IEATRPLSKRKFFAIAEIIRNKGQQ 84
>UniRef50_O06051 Cluster: 30S ribosomal protein S17; n=22;
Bacteria|Rep: 30S ribosomal protein S17 - Mycobacterium
bovis
Length = 135
Score = 37.5 bits (83), Expect = 0.14
Identities = 26/88 (29%), Positives = 41/88 (46%)
Frame = +2
Query: 125 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCF 304
K P T R + G V KMQ+TIV+ + P Y + + + + H
Sbjct: 45 KHTPRTPKPRGRRKTRIGYVVSDKMQKTIVVELEDRMRHPLYGKIIRTTKKVKAHDEDSV 104
Query: 305 RDVEIGDIVTIGECRPLSKTVRFNVLKV 388
IGD V++ E RPLS T R+ ++++
Sbjct: 105 AG--IGDRVSLMETRPLSATKRWRLVEI 130
>UniRef50_Q7NEG1 Cluster: 30S ribosomal protein S17; n=7; cellular
organisms|Rep: 30S ribosomal protein S17 - Gloeobacter
violaceus
Length = 83
Score = 37.5 bits (83), Expect = 0.14
Identities = 25/71 (35%), Positives = 35/71 (49%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G+V MQ+T+V+ + PKY + R R H ++GD V I E PL
Sbjct: 8 GLVVSDAMQKTVVVAVENRVPHPKYKKIVVRTRKFKAHDEE--NRCKVGDRVRILESPPL 65
Query: 356 SKTVRFNVLKV 388
SKT R+ VL +
Sbjct: 66 SKTKRWVVLDI 76
>UniRef50_Q6MJ23 Cluster: 30S ribosomal protein S17; n=12;
Bacteria|Rep: 30S ribosomal protein S17 - Bdellovibrio
bacteriovorus
Length = 89
Score = 37.1 bits (82), Expect = 0.19
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 158 RGRIL--TGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 331
RGR + G V KM +TI + + KY ++ K+ H +IGDIV
Sbjct: 7 RGRKIEVVGEVISDKMDKTISVLIYRMVKHAKYGKYVKKTSVFKAHDEK--NQAKIGDIV 64
Query: 332 TIGECRPLSKTVRFNVLKV 388
I E RPLSKT R+ + +V
Sbjct: 65 KIRETRPLSKTKRWALAEV 83
>UniRef50_Q9TJN6 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=13; Magnoliophyta|Rep: 30S ribosomal
protein S17, chloroplast precursor - Zea mays (Maize)
Length = 132
Score = 37.1 bits (82), Expect = 0.19
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R LTG V K +T+ + L PKY R E+ + H P ++GD+V +
Sbjct: 33 RQLTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELQP 90
Query: 344 CRPLSKTVRF 373
RP+SKT F
Sbjct: 91 SRPISKTKHF 100
>UniRef50_O46903 Cluster: Chloroplast 30S ribosomal protein S17;
n=23; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S17 - Guillardia theta (Cryptomonas phi)
Length = 90
Score = 37.1 bits (82), Expect = 0.19
Identities = 24/75 (32%), Positives = 41/75 (54%)
Frame = +2
Query: 149 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDI 328
+SI+ R+ G+V KM +T+V+ +Y + + + VH P + ++GD+
Sbjct: 1 MSIKERL--GLVISDKMDKTVVVSIANRVTHKRYGKIVTKTKKYKVH-DPN-NNCQVGDL 56
Query: 329 VTIGECRPLSKTVRF 373
+ I E RPLSKT R+
Sbjct: 57 ILINETRPLSKTKRW 71
>UniRef50_Q755H9 Cluster: AFL156Wp; n=2; Saccharomycetaceae|Rep:
AFL156Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 232
Score = 36.7 bits (81), Expect = 0.25
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +2
Query: 179 VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLS 358
V+ KMQ+T+ +R + + + N+ + VH GD+V I RPLS
Sbjct: 10 VISHGKMQKTVKVRVETKVFNKRLNKEMMHRKYYLVHDEG--ESAREGDVVRIEATRPLS 67
Query: 359 KTVRFNVLKVSKGKGSQEV 415
+ F+V ++ K +G ++V
Sbjct: 68 RRKYFSVAEILKNQGQRQV 86
>UniRef50_Q8ABV5 Cluster: 30S ribosomal protein S17 2; n=2;
Bacteroides thetaiotaomicron|Rep: 30S ribosomal protein
S17 2 - Bacteroides thetaiotaomicron
Length = 98
Score = 36.7 bits (81), Expect = 0.25
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
+ G+V KMQ+T+VI + PKY + + + +H P + +GD V E R
Sbjct: 26 IEGIVVSTKMQKTVVIEVERTKKHPKYGKTVQYTKKYKIH-DP-LEECSVGDRVLAHETR 83
Query: 350 PLSKTVRF 373
SKT F
Sbjct: 84 HFSKTKYF 91
>UniRef50_A3VT29 Cluster: 30S ribosomal protein S17; n=2;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Parvularcula bermudensis HTCC2503
Length = 93
Score = 36.3 bits (80), Expect = 0.33
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
RIL G + K ++T+V+R D P + +R + H ++++G V I E
Sbjct: 4 RILQGPIVSDKGEKTVVVRVDRAFKHPLLAKVVRRSKRYHAHDES--NELKVGQRVLIRE 61
Query: 344 CRPLSKTVRFNVL 382
C P SK R+ V+
Sbjct: 62 CPPKSKLKRWEVV 74
>UniRef50_Q6G2X4 Cluster: 30S ribosomal protein S17; n=19;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Bartonella henselae (Rochalimaea henselae)
Length = 79
Score = 36.3 bits (80), Expect = 0.33
Identities = 22/76 (28%), Positives = 39/76 (51%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R+L GVV K +T+V++ + + P + ++ + H +IGD + I E
Sbjct: 4 RVLQGVVVSDKNDKTVVVKVERRYSHPLLKKTVRQSKKYKAHDES--NQFKIGDQIFIQE 61
Query: 344 CRPLSKTVRFNVLKVS 391
+P+SK R+ V+K S
Sbjct: 62 SKPISKDKRWIVVKDS 77
>UniRef50_Q9PE67 Cluster: 30S ribosomal protein S17; n=52;
Bacteria|Rep: 30S ribosomal protein S17 - Xylella
fastidiosa
Length = 89
Score = 35.9 bits (79), Expect = 0.44
Identities = 22/79 (27%), Positives = 43/79 (54%)
Frame = +2
Query: 152 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIV 331
+I+GR+++ +QK T+++ R H L Y ++ KR + H + + GD+V
Sbjct: 13 TIKGRVISNKMQKTV---TVLVERQIKHAL--YGKYIKRSTKLHAHDADDLCNE--GDVV 65
Query: 332 TIGECRPLSKTVRFNVLKV 388
+ E P+SKT + V+++
Sbjct: 66 LMTEVAPISKTKNWRVVEI 84
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 35.9 bits (79), Expect = 0.44
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 92 PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRH 271
P E ++ YI K +T S+ V K KM T ++ D+ HYL Y++ EKR
Sbjct: 102 PLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT-ALKSDFKHYLDMYDKEEKRR 158
Query: 272 RNMS 283
R S
Sbjct: 159 RGKS 162
>UniRef50_Q4FUE7 Cluster: 30S ribosomal protein S17; n=16;
Gammaproteobacteria|Rep: 30S ribosomal protein S17 -
Psychrobacter arcticum
Length = 91
Score = 35.1 bits (77), Expect = 0.77
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 167 ILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGEC 346
+LTG V KM ++I + + L P Y + +R + H + GD+V I E
Sbjct: 13 VLTGRVVSDKMDKSITVLIERLVRHPLYGKQLRRSTKIKAHDEN--NVCQQGDLVRIKET 70
Query: 347 RPLSKTVRFNVLKV 388
RP+SKT + ++ V
Sbjct: 71 RPISKTKSWTLVDV 84
>UniRef50_Q2JFG7 Cluster: 30S ribosomal protein S17; n=19;
Bacteria|Rep: 30S ribosomal protein S17 - Frankia sp.
(strain CcI3)
Length = 102
Score = 35.1 bits (77), Expect = 0.77
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
++ G+V KM +T+V+ + P Y + +R + + H +GD V + E
Sbjct: 25 KVREGLVVSDKMTKTVVVAVEDRVQHPLYGKTIRRTKKVKAHDES--GTTGVGDRVLLME 82
Query: 344 CRPLSKTVRFNVLKV 388
RPLS T R+ +++V
Sbjct: 83 TRPLSATKRWRIVQV 97
>UniRef50_Q62GL4 Cluster: 30S ribosomal protein S17; n=144;
Bacteria|Rep: 30S ribosomal protein S17 - Burkholderia
mallei (Pseudomonas mallei)
Length = 90
Score = 34.7 bits (76), Expect = 1.0
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
R L G V KM +T+ + ++ P Y ++ R + H GD+V I E
Sbjct: 11 RTLVGKVVSNKMDKTVTVLVEHRVKHPIYGKYVVRSKKYHAHDEA--NTYNEGDLVEIQE 68
Query: 344 CRPLSKTVRFNVLKV 388
RP+SKT + V ++
Sbjct: 69 TRPVSKTKAWAVSRL 83
>UniRef50_UPI00001F8C9C Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 147
Score = 33.5 bits (73), Expect = 2.4
Identities = 23/95 (24%), Positives = 37/95 (38%)
Frame = +2
Query: 32 GGMKRKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 211
G +R+D + H N G RE + GT+ K TG S G +TG +
Sbjct: 41 GIARRRDAQQHGNTSHGHTAAREHVTGTHNSKGSHVTGTHSSTGTHVTGTHGSTETCHMD 100
Query: 212 VIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVE 316
++ + + + RHR+ H + D E
Sbjct: 101 AQQQGNARHRDAQQQGKARHRDPGQHGNTYHMDAE 135
>UniRef50_A3TU64 Cluster: 30S ribosomal protein S17; n=3;
Rhodobacteraceae|Rep: 30S ribosomal protein S17 -
Oceanicola batsensis HTCC2597
Length = 109
Score = 33.5 bits (73), Expect = 2.4
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVI--RRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 334
RIL GVV +T+ + R + H L K R K++R F+ GDIV
Sbjct: 4 RILRGVVTSDANAQTVTVSVERRFTHPVLQKTIRKSKKYRAHDA--DNAFKK---GDIVR 58
Query: 335 IGECRPLSKTVRFNVL 382
I EC P SKT R+ V+
Sbjct: 59 IQECAPKSKTKRWEVM 74
>UniRef50_Q9HJI5 Cluster: Putative uncharacterized protein Ta0983;
n=1; Thermoplasma acidophilum|Rep: Putative
uncharacterized protein Ta0983 - Thermoplasma
acidophilum
Length = 322
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +2
Query: 215 IRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
IRRD L+ + +YNR R + + P F IG+IV IGE
Sbjct: 182 IRRDDLNRIDRYNRIRITGRR--IRMKPLFEVASIGNIVGIGE 222
>UniRef50_Q6A6N5 Cluster: 30S ribosomal protein S17; n=133; cellular
organisms|Rep: 30S ribosomal protein S17 -
Propionibacterium acnes
Length = 90
Score = 33.5 bits (73), Expect = 2.4
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +2
Query: 140 TGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEI 319
T + R ++ G+V KM +TI + + P Y + + + H + +
Sbjct: 5 TAERTTRRKVREGLVVSDKMNKTITVMVEDRVKHPLYGKVMTKSVRLKAHDEN--NEAGM 62
Query: 320 GDIVTIGECRPLSKTVRFNVLKV 388
GD V I E RPLS T R+ ++++
Sbjct: 63 GDRVRIMETRPLSATKRWRLVEI 85
>UniRef50_Q9XD27 Cluster: 30S ribosomal protein S17; n=14;
Bacteria|Rep: 30S ribosomal protein S17 - Leptospira
interrogans
Length = 89
Score = 33.5 bits (73), Expect = 2.4
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G V M +T+VI + PK+ + +R + VH + +GD + E RPL
Sbjct: 16 GRVVSNSMNKTVVILVETRKTHPKFKKIVRRSVRLKVHDEK--NECVVGDKILAIETRPL 73
Query: 356 SKTVRFNVLKV 388
SK R + K+
Sbjct: 74 SKEKRHRLYKI 84
>UniRef50_Q85FV4 Cluster: Chloroplast 30S ribosomal protein S17;
n=1; Cyanidioschyzon merolae|Rep: Chloroplast 30S
ribosomal protein S17 - Cyanidioschyzon merolae (Red
alga)
Length = 82
Score = 33.5 bits (73), Expect = 2.4
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVI--RRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
L G+V +MQ+T+++ + H L Y + + + +VH P + +G+++ I
Sbjct: 4 LLGLVVSCRMQKTVIVEVKTQVKHAL--YGKRIMKKKRYAVH-DP-EKKASLGELIWIRT 59
Query: 344 CRPLSKTVRF 373
CRP+SKT ++
Sbjct: 60 CRPISKTKKW 69
>UniRef50_Q1NPK7 Cluster: 30S ribosomal protein S17; n=2;
Proteobacteria|Rep: 30S ribosomal protein S17 - delta
proteobacterium MLMS-1
Length = 86
Score = 33.1 bits (72), Expect = 3.1
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 158 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
R + G+V KM++TIVI Y ++ +R + ++GD V I
Sbjct: 7 RKKTQEGLVISNKMEKTIVIETTRFTPHKLYGKYIRRR--VKYLADDPEGTCQVGDRVLI 64
Query: 338 GECRPLSKTVRFNVLKV 388
ECRPLS+ R+ + V
Sbjct: 65 EECRPLSRRKRWRLRSV 81
>UniRef50_UPI0000498A1C Cluster: hypothetical protein 306.t00001;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 306.t00001 - Entamoeba histolytica HM-1:IMSS
Length = 499
Score = 32.7 bits (71), Expect = 4.1
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Frame = +2
Query: 119 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY----LPKYNRFEKRHRNMSV 286
+ K C F ++ ++ +I++ +V K+ M ++RR Y + K+ K N
Sbjct: 315 LGKYCYFKDDILLQPQIISAIVSKLSMTDKTILRRGYWMLSNISVSKFPETTKAIINSGA 374
Query: 287 HLSPCFRDVEIGDIVTIGE-CRPLSKTV 367
LS C +E D+ E C L+ T+
Sbjct: 375 FLSSCCTILETNDVKIKSEACWLLANTI 402
>UniRef50_Q46IR8 Cluster: 30S ribosomal protein S17; n=3;
Prochlorococcus marinus|Rep: 30S ribosomal protein S17 -
Prochlorococcus marinus (strain NATL2A)
Length = 88
Score = 32.7 bits (71), Expect = 4.1
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 170 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 349
+ G V KMQ+T+V+ + P Y + R H ++GD V I E
Sbjct: 6 MVGTVVSDKMQKTVVVAVENRFPHPIYQKIISRTTRYKAH--DAENHCKVGDRVRIKESP 63
Query: 350 PLSKTVRFNVLKV-SKGKGSQE 412
P+S R+ V V KG S+E
Sbjct: 64 PISAHKRWTVTDVLVKGMKSKE 85
>UniRef50_P23404 Cluster: Cyanelle 30S ribosomal protein S17; n=1;
Cyanophora paradoxa|Rep: Cyanelle 30S ribosomal protein
S17 - Cyanophora paradoxa
Length = 88
Score = 32.7 bits (71), Expect = 4.1
Identities = 22/81 (27%), Positives = 40/81 (49%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
GVV + ++T+++ + KY++ R + VH ++GD V I E +P+
Sbjct: 8 GVVIRNPQEKTVIVAVNNRVRHNKYSKIIIRTKKYQVHDHSHI--CKLGDEVKISEVKPI 65
Query: 356 SKTVRFNVLKVSKGKGSQEVF 418
SKT R+ + +V + E F
Sbjct: 66 SKTKRWIISEVLSSTVNPEKF 86
>UniRef50_A7CUU5 Cluster: Ribosomal protein S17; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S17 - Opitutaceae
bacterium TAV2
Length = 112
Score = 32.3 bits (70), Expect = 5.4
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
+ L G V ++I + Y P+Y + R + VH + ++GD V I E
Sbjct: 14 KTLIGTVTSRSGDKSIKVTVPYKVPHPQYRKVINRKTVVHVHDEK--NETKVGDKVEIME 71
Query: 344 CRPLSKTVRFNVLKV 388
RPLS+ R+ +++
Sbjct: 72 TRPLSRLKRWRTIRI 86
>UniRef50_Q00UW4 Cluster: 30S RIBOSOMAL PROTEIN S17; n=2;
Ostreococcus|Rep: 30S RIBOSOMAL PROTEIN S17 -
Ostreococcus tauri
Length = 160
Score = 32.3 bits (70), Expect = 5.4
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +2
Query: 83 FKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVV--QKMKMQRTIVIRRDYLHYLPKYNR 256
F T A++ + ++ + L GVV Q + +++ R H PKY +
Sbjct: 26 FTTSTVALKTPTTPARATRATGITAAAQTLEGVVVSQSGAKSKVVLVERKVPH--PKYIK 83
Query: 257 FEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 388
+ H ++GD V I CRP+S+ RF + KV
Sbjct: 84 RVNASKKFMFHDEN--DGCKVGDRVEISACRPMSRKKRFQLNKV 125
>UniRef50_Q1AU38 Cluster: 30S ribosomal protein S17; n=18;
Bacteria|Rep: 30S ribosomal protein S17 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 138
Score = 32.3 bits (70), Expect = 5.4
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G+V +T+ + + L P Y + +R + VH + +GD V I E RPL
Sbjct: 65 GLVVSDAADKTVTVSVETLKEHPMYKKRIRRSKKFLVHDER--NEARVGDTVRIIETRPL 122
Query: 356 SKTVRFNVLKV 388
S+ R+ + +
Sbjct: 123 SRRKRWRLASI 133
>UniRef50_UPI0000DB6FFA Cluster: PREDICTED: similar to Papilin
CG33103-PB, isoform B isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to Papilin CG33103-PB,
isoform B isoform 1 - Apis mellifera
Length = 2807
Score = 31.9 bits (69), Expect = 7.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 230 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
L+ +P+ RF RH+ M + +PC +VE D+ G+C P+
Sbjct: 140 LNCMPRGERFFYRHKLMVIDGTPC--EVEKNDVCVGGKCMPV 179
>UniRef50_Q9VHN4 Cluster: CG8043-PA; n=3; Sophophora|Rep: CG8043-PA
- Drosophila melanogaster (Fruit fly)
Length = 348
Score = 31.9 bits (69), Expect = 7.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 292 QMHGHIPVPFLEPIVFG*VVKVIAADHDSSLHLHFLNDAG 173
++HG VPFL+ + V ++ + +S++ HFLN AG
Sbjct: 50 RVHGAEVVPFLQGLATNDVARIQSPGGPASMYAHFLNKAG 89
>UniRef50_Q2PBA5 Cluster: Putative H3K9 methyltransferase; n=1;
Drosophila nasutoides|Rep: Putative H3K9
methyltransferase - Drosophila nasutoides
Length = 640
Score = 31.9 bits (69), Expect = 7.2
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 158 RGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTI 337
RGRI V+++++MQR+ +RR L L K+ + H N SP R V D+ +I
Sbjct: 336 RGRIEERVLRRLQMQRSCHLRRKQLQKLAKF----EAHMNTVEQPSPPIRVVNDSDLDSI 391
>UniRef50_Q4P4F8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 125
Score = 31.9 bits (69), Expect = 7.2
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +2
Query: 170 LTGVVQK---MKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIG 340
+ G+V K M T+ + R +H PK + RH+ VH + +GD +
Sbjct: 6 IEGIVTKAGVMAKTVTVTVERRLIH--PKLLKPYIRHKKYLVHDEN--NSLSVGDKIVAS 61
Query: 341 ECRPLSKTVRFNV 379
CRPLS RF +
Sbjct: 62 ACRPLSARKRFTL 74
>UniRef50_Q5LW49 Cluster: 30S ribosomal protein S17; n=22;
Alphaproteobacteria|Rep: 30S ribosomal protein S17 -
Silicibacter pomeroyi
Length = 76
Score = 31.9 bits (69), Expect = 7.2
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTI--VIRRDYLH-YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVT 334
RIL G V +T+ ++ R + H L K R K++R H ++GD V
Sbjct: 4 RILQGTVTSDANAQTVTVLVERRFTHPVLKKTIRKSKKYR---AHDEK--NAFKVGDTVR 58
Query: 335 IGECRPLSKTVRFNVLK 385
I EC P SKT R+ VL+
Sbjct: 59 IIECAPKSKTKRWEVLE 75
>UniRef50_UPI00015B5A89 Cluster: PREDICTED: similar to papilin; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to papilin -
Nasonia vitripennis
Length = 2437
Score = 31.5 bits (68), Expect = 9.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 230 LHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
L+ +P+ RF RHR + +PC ++E D+ G+C P+
Sbjct: 127 LNCMPRGERFFYRHRESVIDGTPC--NIEKNDVCVEGKCMPV 166
>UniRef50_Q899R5 Cluster: Conserved protein; n=11; Clostridium|Rep:
Conserved protein - Clostridium tetani
Length = 191
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 59 HHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRI-LTGVVQKMKMQRT 208
H +N+G F + G+ ++K P GN+SI G + ++G ++ M +Q T
Sbjct: 107 HIQNIGKVFVEDKPLKPGSAVNKDLPPVGNLSITGIVNISGTLEFMVLQNT 157
>UniRef50_A3DH51 Cluster: Amidohydrolase; n=1; Clostridium
thermocellum ATCC 27405|Rep: Amidohydrolase -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 393
Score = 31.5 bits (68), Expect = 9.5
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +2
Query: 44 RKDMRHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRR 223
R+D+ HKN LGF R + + K F+ ++ + GV++ + +TI IR
Sbjct: 21 RRDI--HKNPELGFNEYRTSSIASDFMKNLGFSVRTNVAKTGVVGVLEGERPGKTIAIRA 78
Query: 224 DYLHYLP--KYNRFEKRHRNMSVHLSPCFRDVEI 319
D + +P + N FE +N +V + C D I
Sbjct: 79 D-MDAIPIAEENDFEYASQNKNV-MHACGHDAHI 110
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +2
Query: 152 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 292
S++ RI+ + M+ R++ I+ Y HYLPK+ R + HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298
>UniRef50_A4IBS3 Cluster: 30S Ribosomal protein S17-like protein;
n=5; Trypanosomatidae|Rep: 30S Ribosomal protein
S17-like protein - Leishmania infantum
Length = 312
Score = 31.5 bits (68), Expect = 9.5
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G V M +T V+ +++ Y PK+N+ R H VE GD+V I + R +
Sbjct: 96 GYVVGTSMLKTAVVAANHMVYYPKFNQRVSRTSRFFAH-DEDLACVE-GDLVHIKQSRKI 153
Query: 356 SKTVRFNVLKV 388
SK + V +
Sbjct: 154 SKYKHYYVFSI 164
>UniRef50_Q7U4J1 Cluster: 30S ribosomal protein S17; n=6;
Synechococcus|Rep: 30S ribosomal protein S17 -
Synechococcus sp. (strain WH8102)
Length = 103
Score = 31.5 bits (68), Expect = 9.5
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 176 GVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPL 355
G V KM++T+V+ + P Y + R H +GD V I E RP+
Sbjct: 8 GTVVSDKMEKTVVVAVESRFPHPIYQKTVSRTTRYKAHDED--NSCRVGDRVRITETRPM 65
Query: 356 SKTVRFNVLKV 388
S+ R+ + +V
Sbjct: 66 SRHKRWAIAEV 76
>UniRef50_P16180 Cluster: 30S ribosomal protein S17, chloroplast
precursor; n=3; cellular organisms|Rep: 30S ribosomal
protein S17, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 149
Score = 31.5 bits (68), Expect = 9.5
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +2
Query: 164 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGE 343
+ + G V +T+ + L PKY R + + H P ++GD+V + +
Sbjct: 51 KTMQGRVVCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAH-DPD-NQFKVGDVVRLEK 108
Query: 344 CRPLSKTVRFNVLKV 388
RP+SKT F L V
Sbjct: 109 SRPISKTKSFVALPV 123
>UniRef50_Q758N2 Cluster: Autophagy-related protein 13; n=1;
Eremothecium gossypii|Rep: Autophagy-related protein 13
- Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 659
Score = 31.5 bits (68), Expect = 9.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -3
Query: 397 AL*NFQNIESNCFGQRSAFADRYNITNLHVPEARRQMHGHIPVPFLEPIV 248
+L FQ+++SN + Y++ H P+ R + + H P+P + P V
Sbjct: 442 SLVRFQSMKSNNDTLSEDLSMSYSLEPTHAPQVRYRSNSHSPIPSISPSV 491
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,575,773
Number of Sequences: 1657284
Number of extensions: 8279462
Number of successful extensions: 18844
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 18387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18795
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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