Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1067
(300 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I bind... 101 4e-22
BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I bind... 101 4e-22
BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I bind... 101 4e-22
BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein. 101 4e-22
AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I bind... 101 4e-22
AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I bind... 101 4e-22
AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I bind... 101 4e-22
AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein ... 101 4e-22
BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein. 55 4e-08
BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein. 38 0.006
BC032112-1|AAH32112.1| 552|Homo sapiens integrin alpha FG-GAP r... 30 1.2
BC013047-1|AAH13047.1| 552|Homo sapiens integrin alpha FG-GAP r... 30 1.2
BC010521-1|AAH10521.1| 526|Homo sapiens ITFG3 protein protein. 30 1.2
AK057165-1|BAB71374.1| 540|Homo sapiens protein ( Homo sapiens ... 30 1.2
AE006462-12|AAK61220.1| 636|Homo sapiens unknown function protein. 30 1.2
>BC100934-1|AAI00935.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>BC100933-1|AAI00934.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>BC100931-1|AAI00932.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>BC056917-1|AAH56917.1| 260|Homo sapiens APOA1BP protein protein.
Length = 260
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>AL365181-7|CAI13051.1| 288|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 288
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>AL365181-6|CAI13050.1| 260|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 260
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>AL365181-5|CAI13049.1| 245|Homo sapiens apolipoprotein A-I binding
protein protein.
Length = 245
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>AJ315849-1|CAC86580.1| 288|Homo sapiens apoA-I binding protein
protein.
Length = 288
Score = 101 bits (242), Expect = 4e-22
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 4/76 (5%)
Frame = +2
Query: 80 NTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHL----SALI 247
+TV +YL+Q EA A+DQ+LF EY+FSVDQLMELAGLS A+AIAK +PP++ + L+
Sbjct: 54 STVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPTSMSRSPPTVLV 113
Query: 248 VCGPGNNGGDGLVARK 295
+CGPGNNGGDGLV +
Sbjct: 114 ICGPGNNGGDGLVCAR 129
>BC020948-1|AAH20948.1| 254|Homo sapiens FLJ44968 protein protein.
Length = 254
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Frame = +2
Query: 107 SEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFP-PS---THLSALIVCGPGNNGG 274
+EAAAL+++L +Y+F QL+EL G + A A+ K FP P+ + L+VCGP NG
Sbjct: 79 AEAAALERELLEDYRFGRQQLVELCGHASAVAVTKAFPLPALSRKQRTVLVVCGPEQNGA 138
Query: 275 DGLVARK 295
GLV +
Sbjct: 139 VGLVCAR 145
>BC100932-1|AAI00933.1| 185|Homo sapiens APOA1BP protein protein.
Length = 185
Score = 37.9 bits (84), Expect = 0.006
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 236 SALIVCGPGNNGGDGLVARK 295
+ L++CGPGNNGGDGLV +
Sbjct: 7 TVLVICGPGNNGGDGLVCAR 26
>BC032112-1|AAH32112.1| 552|Homo sapiens integrin alpha FG-GAP
repeat containing 3 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 167 LMELAGLS--VASAIAKVFPPSTHLSALIVCGPGNNGGDGLVA 289
L+ELA +S + + A +F PS H + +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>BC013047-1|AAH13047.1| 552|Homo sapiens integrin alpha FG-GAP
repeat containing 3 protein.
Length = 552
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 167 LMELAGLS--VASAIAKVFPPSTHLSALIVCGPGNNGGDGLVA 289
L+ELA +S + + A +F PS H + +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>BC010521-1|AAH10521.1| 526|Homo sapiens ITFG3 protein protein.
Length = 526
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 167 LMELAGLS--VASAIAKVFPPSTHLSALIVCGPGNNGGDGLVA 289
L+ELA +S + + A +F PS H + +++ GP ++ GLV+
Sbjct: 442 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 484
>AK057165-1|BAB71374.1| 540|Homo sapiens protein ( Homo sapiens
cDNA FLJ32603 fis, clone STOMA1000117. ).
Length = 540
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 167 LMELAGLS--VASAIAKVFPPSTHLSALIVCGPGNNGGDGLVA 289
L+ELA +S + + A +F PS H + +++ GP ++ GLV+
Sbjct: 468 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 510
>AE006462-12|AAK61220.1| 636|Homo sapiens unknown function protein.
Length = 636
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 167 LMELAGLS--VASAIAKVFPPSTHLSALIVCGPGNNGGDGLVA 289
L+ELA +S + + A +F PS H + +++ GP ++ GLV+
Sbjct: 525 LLELANVSTHIVAFDAVLFEPSRHAAYILLTGPADSEAPGLVS 567
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,837,462
Number of Sequences: 237096
Number of extensions: 824766
Number of successful extensions: 1983
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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