Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1067
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034393-3|CAA22319.1| 348|Caenorhabditis elegans Hypothetical ... 76 5e-15
AC024804-3|AAF60750.1| 130|Caenorhabditis elegans Hypothetical ... 26 4.4
Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical pr... 26 5.8
DQ178244-1|ABA18183.1| 521|Caenorhabditis elegans putative sulf... 26 5.8
AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion transpo... 26 5.8
AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion transpo... 26 5.8
AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine re... 26 5.8
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 25 7.6
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 25 7.6
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 25 7.6
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 25 7.6
AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical ... 25 7.6
>AL034393-3|CAA22319.1| 348|Caenorhabditis elegans Hypothetical
protein Y18D10A.3 protein.
Length = 348
Score = 75.8 bits (178), Expect = 5e-15
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +2
Query: 95 YLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHLSALIVCGPGNNGG 274
++ Q AA +D+ LFT+Y F V+QLMELAGL+ A AIA +P S + ++CGPGNNGG
Sbjct: 125 FIGQKLAAQIDEQLFTKYGFKVEQLMELAGLAAAQAIAAHYPKS---NVAVLCGPGNNGG 181
Query: 275 DGLVARK 295
DG V +
Sbjct: 182 DGFVCAR 188
>AC024804-3|AAF60750.1| 130|Caenorhabditis elegans Hypothetical
protein Y51H7BR.7 protein.
Length = 130
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -2
Query: 80 CIDSYRSS*FRCYTV-LLHAILE 15
C DS RSS FRC+ V LL A+L+
Sbjct: 82 CSDSGRSSTFRCFMVNLLAAMLQ 104
>Z70757-2|CAA94798.1| 611|Caenorhabditis elegans Hypothetical
protein ZK287.2 protein.
Length = 611
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 143 EYKFSVDQLMELAGLSVASAIAKVFP 220
++K+ D EL + +ASA++ FP
Sbjct: 333 KHKYKTDATQELYAIGIASALSSFFP 358
>DQ178244-1|ABA18183.1| 521|Caenorhabditis elegans putative sulfate
transporter prestinprotein.
Length = 521
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 143 EYKFSVDQLMELAGLSVASAIAKVFP 220
++K+ D EL + +ASA++ FP
Sbjct: 243 KHKYKTDATQELYAIGIASALSSFFP 268
>AY954525-1|AAX34433.1| 611|Caenorhabditis elegans anion
transporter SULP-8a protein.
Length = 611
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 143 EYKFSVDQLMELAGLSVASAIAKVFP 220
++K+ D EL + +ASA++ FP
Sbjct: 333 KHKYKTDATQELYAIGIASALSSFFP 358
>AY887917-1|AAX34429.1| 611|Caenorhabditis elegans anion
transporter SULP-8b protein.
Length = 611
Score = 25.8 bits (54), Expect = 5.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 143 EYKFSVDQLMELAGLSVASAIAKVFP 220
++K+ D EL + +ASA++ FP
Sbjct: 333 KHKYKTDATQELYAIGIASALSSFFP 358
>AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 59 protein.
Length = 296
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 10 ECSNIACSKTV*HRNYDERYES-MQYC 87
EC+N CS + NY + YE MQ C
Sbjct: 156 ECNNFGCSVNSCYHNYWKWYEQIMQLC 182
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 29 VAKLYNIGTMTSGMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVAS 199
VA L I +SG+ Q T RY+ Q + D+++ KF QL + A L + S
Sbjct: 237 VADLMEIEEFSSGLTQLRTFVRYMKQ------NSDMYS--KFRRMQLQKNAELDIPS 285
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 29 VAKLYNIGTMTSGMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVAS 199
VA L I +SG+ Q T RY+ Q + D+++ KF QL + A L + S
Sbjct: 237 VADLMEIEEFSSGLTQLRTFVRYMKQ------NSDMYS--KFRRMQLQKNAELDIPS 285
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 29 VAKLYNIGTMTSGMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVAS 199
VA L I +SG+ Q T RY+ Q + D+++ KF QL + A L + S
Sbjct: 237 VADLMEIEEFSSGLTQLRTFVRYMKQ------NSDMYS--KFRRMQLQKNAELDIPS 285
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 29 VAKLYNIGTMTSGMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVAS 199
VA L I +SG+ Q T RY+ Q + D+++ KF QL + A L + S
Sbjct: 237 VADLMEIEEFSSGLTQLRTFVRYMKQ------NSDMYS--KFRRMQLQKNAELDIPS 285
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 29 VAKLYNIGTMTSGMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVAS 199
VA L I +SG+ Q T RY+ Q + D+++ KF QL + A L + S
Sbjct: 237 VADLMEIEEFSSGLTQLRTFVRYMKQ------NSDMYS--KFRRMQLQKNAELDIPS 285
>AC024880-8|AAK85514.1| 167|Caenorhabditis elegans Hypothetical
protein Y97E10AR.5 protein.
Length = 167
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 52 NYDERYESMQYCDAVPQSVRSGSTGPG 132
NYD+ Y+ A Q+ + G +GPG
Sbjct: 26 NYDDMYDQNGASPAPSQNEKPGKSGPG 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,855,665
Number of Sequences: 27780
Number of extensions: 127172
Number of successful extensions: 272
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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