Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1065
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q26018 Cluster: Serine/threonine-protein kinase; n=2; P...    37   0.48 
UniRef50_A0CQ54 Cluster: Chromosome undetermined scaffold_24, wh...    34   2.6  
UniRef50_UPI0000DB712C Cluster: PREDICTED: similar to CG4159-PA;...    33   4.5  
UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_A5JZK0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q26018 Cluster: Serine/threonine-protein kinase; n=2;
           Plasmodium falciparum|Rep: Serine/threonine-protein
           kinase - Plasmodium falciparum
          Length = 765

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = +3

Query: 372 CLHEYLYYHSVKLFILENKTRNFNIVIFNQIYKEILLHLTILHRH 506
           CL  ++Y H +    + NK R   I+ +++I KEI +H  I H H
Sbjct: 410 CLGIHIYTHEIVAIKILNKKRLIEIINYDKIIKEIEIHKNINHNH 454


>UniRef50_A0CQ54 Cluster: Chromosome undetermined scaffold_24, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_24,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 444

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
 Frame = +3

Query: 399 SVKLFILEN-KTRNFNIVIFNQIYKEILLHLTILHRHPNGLPTLQ*RLTQPVLNWLFLLL 575
           S+ L IL    TRN N V F+Q +++ L H TI+    N L T++   T  +L+    LL
Sbjct: 36  SINLLILWGLSTRNINQVEFDQNHRDYLYHYTIVD-GDNTLLTMKYSSTPELLHLKTELL 94

Query: 576 SKYEFILVGSH*FYSFMF 629
            ++ F ++  +  Y+  F
Sbjct: 95  QQHNFTIININVDYNSFF 112


>UniRef50_UPI0000DB712C Cluster: PREDICTED: similar to CG4159-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG4159-PA
           - Apis mellifera
          Length = 366

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
 Frame = +3

Query: 402 VKLFILENKTRNFNI--VIFNQIYKEILLHLTILHRHPNGLPTLQ*RLTQPVLNWLFLLL 575
           +K+F ++  TRNFN       + Y+ +L    +    PNG P  + RL   +L+ L  +L
Sbjct: 137 IKVFDIKRVTRNFNSKNKCDARTYRYVLPTFALASEDPNGKPYNEFRLNSDMLDKLNEIL 196

Query: 576 SKYEFILVGSH*FYSF 623
             +E    G+H F++F
Sbjct: 197 KLFE----GTHNFHNF 208


>UniRef50_Q6LFA6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 1680

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 19/44 (43%), Positives = 26/44 (59%)
 Frame = +3

Query: 372 CLHEYLYYHSVKLFILENKTRNFNIVIFNQIYKEILLHLTILHR 503
           CL +Y+YY+      LE K +  NIV  N+ YK IL H  +LH+
Sbjct: 234 CL-KYIYYNKNDYMSLEKKIKLLNIVDQNK-YKFILDHARVLHK 275


>UniRef50_A5JZK0 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium vivax|Rep: Putative uncharacterized protein -
            Plasmodium vivax
          Length = 3027

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 369  SCLHEYLYYHSVKLFILENKTRNFNIVIFNQIY 467
            SC+ + LYY+ VKLF  E      N V+ NQ++
Sbjct: 2739 SCIRDSLYYNPVKLFDQEKYNLYINNVLLNQLF 2771


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,272,584
Number of Sequences: 1657284
Number of extensions: 12947454
Number of successful extensions: 26233
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26222
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)