Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1065
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.9  
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   5.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   5.0  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.8  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 384 YLYYHSVKLFILENKTRNFNIVIFNQI 464
           Y Y+  V + I   K RN N+++  Q+
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLTEQL 184


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 492 ILHRHPNGLPTLQ*RLTQPVLNWL 563
           +L+ +   L T   R+TQPVL W+
Sbjct: 57  VLNVYTKNLRTDTNRITQPVLFWI 80


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 206 GKLDALIQFWVIFGYSCSENKTREFFVLLYLIQFIN 313
           G LD+LI   V+        KT+E+  L    Q+I+
Sbjct: 81  GSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 59  FGWXVAFXIQPHLLYLVWYPH-SVTLG 136
           FGW + F I    L ++ Y H +V LG
Sbjct: 225 FGWQILFLITYATLQILVYLHLAVMLG 251


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 59  FGWXVAFXIQPHLLYLVWYPH-SVTLG 136
           FGW + F I    L ++ Y H +V LG
Sbjct: 225 FGWQILFLITYATLQILVYLHLAVMLG 251


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 161 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 298
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 14  PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 59


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 161 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 298
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +2

Query: 161 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 298
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,748
Number of Sequences: 336
Number of extensions: 3747
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)