Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1063
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       28   0.084
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    28   0.084
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    28   0.084
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.59 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.59 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.7  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.7  

>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 451 LPQERGPQREHNEQLDQKRQDQRRHSEAESQKHGDI 558
           L +E    +E NEQ  ++R++Q RH + + +K   I
Sbjct: 61  LKKELRAVKEINEQARREREEQERHKQQQQEKQQKI 96


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 451 LPQERGPQREHNEQLDQKRQDQRRHSEAESQKHGDI 558
           L +E    +E NEQ  ++R++Q RH + + +K   I
Sbjct: 212 LKKELRAVKEINEQARREREEQERHKQQQQEKQQKI 247


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 0.084
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 451 LPQERGPQREHNEQLDQKRQDQRRHSEAESQKHGDI 558
           L +E    +E NEQ  ++R++Q RH + + +K   I
Sbjct: 271 LKKELRAVKEINEQARREREEQERHKQQQQEKQQKI 306


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 366 KRHNSSYVYFVMSICVYTFRMSSILTTFRL 277
           K+H S Y YF   I  YT  + S+ + FR+
Sbjct: 49  KQHKSDYFYFSFYITSYT--LLSVYSLFRI 76


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 366 KRHNSSYVYFVMSICVYTFRMSSILTTFRL 277
           K+H S Y YF   I  YT  + S+ + FR+
Sbjct: 49  KQHKSDYFYFSFYITSYT--LLSVYSLFRI 76


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = -2

Query: 411 YSCVYFLMISL*YFSKRHNSSYVYFVMSICVYTFRMSSIL 292
           + CV  +++ + YF        V+ ++ +C+Y F    +L
Sbjct: 228 FYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLL 267


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -1

Query: 85  LLFLVFVSFHLY 50
           L+F++FV++ LY
Sbjct: 538 LIFMIFVTYQLY 549


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -1

Query: 82  LFLVFVSFHLYLLE 41
           +FL+FVS+++Y+ +
Sbjct: 188 IFLMFVSYNIYVCQ 201


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -1

Query: 82  LFLVFVSFHLYLLE 41
           +FL+FVS+++Y+ +
Sbjct: 114 IFLMFVSYNIYVCQ 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,892
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)