Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1063
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1297 - 35536193-35536312,35536405-35536467,35536610-355369... 35 0.071
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 31 0.67
03_01_0080 - 640806-641146,642484-642700,642795-642952,644057-64... 30 1.5
03_05_0865 - 28365430-28367640 30 2.0
09_04_0085 + 14441123-14443507,14443731-14443787 29 2.7
05_07_0216 + 28461783-28461788,28461837-28462295,28463198-284633... 29 2.7
02_05_1217 + 34999631-34999945,35000670-35000835,35001908-350020... 29 2.7
12_02_0347 + 17808819-17809386,17809920-17810005,17810596-17810628 29 3.5
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 29 4.7
06_01_0617 - 4483517-4483978,4484093-4484490,4484814-4484898,448... 29 4.7
01_05_0329 - 21037980-21038378,21038517-21038737,21038827-210389... 29 4.7
10_08_0628 + 19389508-19389637,19389774-19389850,19390332-193904... 28 6.2
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 28 6.2
06_03_0576 - 22443668-22444146,22446239-22446393,22447251-224473... 28 6.2
03_06_0205 - 32347636-32347646,32347762-32347801,32347959-323480... 28 6.2
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 6.2
01_03_0255 - 14281004-14281066,14281114-14281203,14281672-142817... 28 6.2
07_03_1092 - 23903436-23903534,23903650-23903715,23903832-239038... 28 8.2
04_03_0357 + 14852584-14853058,14853116-14855754 28 8.2
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 28 8.2
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 28 8.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 28 8.2
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 28 8.2
>02_05_1297 -
35536193-35536312,35536405-35536467,35536610-35536942,
35537098-35537184,35538337-35538399,35538604-35538750,
35538900-35539001,35539069-35539197,35539506-35539664,
35539726-35539967,35540317-35540506,35540692-35540907,
35541536-35541760
Length = 691
Score = 34.7 bits (76), Expect = 0.071
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 56 MERDKYEKEKTRL-QTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYKGFDPL 232
+ER + +E+ L Q +D+ +I + +DLEY+ ++E+ K + KD I K + +
Sbjct: 264 IERVQLLQEEAHLVQRQVDKCRINILRYKDLEYEAEFEQSASKSKDGLDKDAISKRLEEI 323
Query: 233 IERLKALSNVHVEGRKRKVV 292
+RL+ + E R ++
Sbjct: 324 YKRLEFIDADAAEARAASIL 343
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 457 QERGPQREHNEQLDQKRQDQRRHSEAESQKHGDIRPDQDVPSRVLREQLVVYL*RHPQKQ 636
+ R +R+H+ + D+ +D+ RH + E +H R D+D R R Y R+ +Q
Sbjct: 283 RSRSHERDHDSERDRSDRDRGRHKDREHDRHA--REDRD---RDYRRS--SYSSRNVDRQ 335
Query: 637 GKPIRD 654
G+ RD
Sbjct: 336 GRERRD 341
>03_01_0080 -
640806-641146,642484-642700,642795-642952,644057-645062
Length = 573
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 44 EEIKMERDKYE-KEKTRLQTFIDEVDSSIQKKRDLE-YDQKYEEMVLKLIEF 193
E+ + E +K++ E+ LQTF+D+ ++S++K L Y E VL EF
Sbjct: 383 EKKRTEENKFKLSERLLLQTFLDQTETSLKKYAHLNFYAGTGSEKVLVFAEF 434
>03_05_0865 - 28365430-28367640
Length = 736
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/68 (30%), Positives = 28/68 (41%)
Frame = +1
Query: 1 PPRAAEVQRTRARSRGDKDGKRQIREREDTPADLHR*SGQLDTEETRSRVRSKIRGDGLK 180
PPR + R S D+D R D D R D+ R R R + RGD +
Sbjct: 59 PPRDSSSSHHRDSSDRDRDRDRDRDRDRDRDRDRERRRDD-DSRRDRDRDRDRDRGDSSR 117
Query: 181 INRICEKG 204
+R E+G
Sbjct: 118 RDRDRERG 125
>09_04_0085 + 14441123-14443507,14443731-14443787
Length = 813
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 20 FSGHELVLEEIKM-ERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMV 175
F E +E+IK E+DKY+KE+ L + E + + +R + + YEE +
Sbjct: 373 FKTQETKIEQIKRKEQDKYDKEEQNLGKILSEEEQWAENER--LFLESYEEEI 423
>05_07_0216 +
28461783-28461788,28461837-28462295,28463198-28463315,
28463350-28463609,28465220-28465525
Length = 382
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 451 LPQERG-PQREH-NEQLDQKRQDQRRHSEAESQKHGD 555
L + RG P+R H N+QL QKR Q+ ++ A+ +K D
Sbjct: 153 LQELRGEPKRRHTNQQLSQKRNHQKWNTNADEEKKLD 189
>02_05_1217 +
34999631-34999945,35000670-35000835,35001908-35002005,
35002245-35002319,35002413-35002481,35002552-35002637,
35002710-35002827,35003575-35003902,35003995-35005682,
35005822-35005881,35005953-35006027,35006105-35006197,
35006298-35006372,35006464-35006532,35006614-35006682,
35006994-35007113
Length = 1167
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 226 SFNRATESFVERPCRGTQTEGRQY---RRHPERIHADRHHKIHIRGIVSLREVL 378
+FN +S +E+ RG Q + + R R AD HHKI + SL E++
Sbjct: 601 AFNFLRQSLLEQGPRGIQEVAQNFDKVMRFVSRYLADPHHKIAQAALSSLSEIM 654
>12_02_0347 + 17808819-17809386,17809920-17810005,17810596-17810628
Length = 228
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/93 (23%), Positives = 44/93 (47%)
Frame = +2
Query: 26 GHELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKD 205
G V+EE K ++ K+KT+ F E ++ +D+E + + + L+E ++
Sbjct: 38 GEAPVMEEKKKKKTTTTKKKTKTMRFTQEQINNCIAYKDVEI--PFNDNMPSLLEALGEE 95
Query: 206 FIYKGFDPLIERLKALSNVHVEGRKRKVVNIED 304
+ LI++LKA + E K + I++
Sbjct: 96 TLANFPQDLIDKLKAYEDER-EAEKASFIEIQN 127
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 32 ELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKD 205
+L ++ K + EK RL T I SS++ D++ DQ YE ++L+ +EF D
Sbjct: 1586 KLQIQNFKENEALFLSEKERLLTEI----SSLKMLLDVK-DQTYENLLLEKLEFVSSD 1638
>06_01_0617 -
4483517-4483978,4484093-4484490,4484814-4484898,
4485002-4485838
Length = 593
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 336 VMSICVYTFRMSSILTTFRLRPSTWTFDK 250
V+ + YT +SS+LTT RLRPS D+
Sbjct: 328 VILVQSYTASLSSMLTTSRLRPSVVDLDQ 356
>01_05_0329 -
21037980-21038378,21038517-21038737,21038827-21038905,
21039002-21039071,21039144-21039255,21039359-21039398,
21039482-21039676,21039925-21040044,21040684-21041106,
21042386-21042928
Length = 733
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFI--DEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKK 202
L IK + + +K++ RL F+ EVD++ ++ D +E+ LKL+E+ +K
Sbjct: 634 LVSIKNHQTELKKKRARLDQFMLEREVDNASVEQSQKLLDIMIKELELKLLEYREK 689
>10_08_0628 +
19389508-19389637,19389774-19389850,19390332-19390438,
19390545-19390626,19390702-19390814,19391023-19391086,
19391192-19391266,19391691-19391807,19392131-19392199,
19392319-19392411,19392733-19392835,19393040-19393164,
19393317-19393366,19393477-19393543,19393663-19393742,
19394038-19394166,19394274-19394340,19394429-19394512
Length = 543
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +1
Query: 160 IRGDGLKINRICEKGLYLQGL*SFNRATESFVERPCRGTQTEGRQYRRHPERIHADRHHK 339
I DG K + G+ L+G N + + CRG+ +E + R H R H+
Sbjct: 151 IAKDGSK-RETFQPGVELRGDYLENAGRMTLLAEGCRGSLSE-KIIRNHKLRESGQGQHQ 208
Query: 340 IHIRGIVSLREVL*GNHK 393
+ GI + E+ G HK
Sbjct: 209 TYALGIKEVWEIEEGKHK 226
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 7 RAAEVQRTRARSRGDKDGKRQIRE--REDTPADLHR*SGQLDTEETRSRVRSK 159
+ ++ R R RGD G+R IR+ R+D DL G D +R R +
Sbjct: 256 QGSKTTREDGRRRGDLGGRRDIRDDRRDDARHDLDGRHGDRDDRRDDARRRDR 308
>06_03_0576 -
22443668-22444146,22446239-22446393,22447251-22447331,
22448475-22448618,22449670-22449695,22449748-22449811,
22449905-22449996,22450550-22450780,22451238-22451678,
22451754-22452293
Length = 750
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 457 QERGPQREHNEQ-LDQKRQDQRRHSEAESQKHGDIRPDQD 573
QER P+ E EQ DQ+ D+R H++++ + D++P D
Sbjct: 394 QERPPEAELPEQDEDQEDPDERHHADSDVEM-DDVKPLDD 432
>03_06_0205 -
32347636-32347646,32347762-32347801,32347959-32348060,
32348473-32348599,32348893-32350835,32351347-32351367
Length = 747
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/103 (21%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Frame = +2
Query: 29 HELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDF 208
HEL L+E E K+++EK L T ++V+ +K+ + + ++++ K I+
Sbjct: 338 HELDLQEKTEELFKFKREK-GLLTLKNDVEFEPLRKKIPQIISRMDQIISKNIKMPSLCM 396
Query: 209 IYKGFDPLIERLKALSNVHVEGRKRKVV---NIEDILNVYTQI 328
G D K + +++ E + + + N++D+ + +Q+
Sbjct: 397 TNDGLDERCISAKRIDSLYYENQHLRGLLADNMKDVKELSSQL 439
>02_04_0179 + 20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 496 DQKRQDQRRHSEAESQKHGDIRPDQDVPSRVLREQLV 606
DQK DQ++ E E + +I+ + +P L E V
Sbjct: 1000 DQKEADQKKAKEEEEKHMAEIKKNMGIPDSTLDEHRV 1036
>01_03_0255 -
14281004-14281066,14281114-14281203,14281672-14281737,
14281837-14281907,14282021-14282153,14282245-14283898,
14285346-14285935
Length = 888
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +2
Query: 23 SGHELVLEEIKMERDKYEKEKTRLQTFID-EVDSSIQKKRDLEYDQKYEEMVLKLIEFAK 199
SG E EE +E +K ++EK Q ++ + + ++++R++ +++EE + E
Sbjct: 509 SGMESRDEEELLEHEKKQREKEEEQRKLERDREEELEREREMMRRREHEERKRREKEREA 568
Query: 200 KDFIYKGFDPLIERLKALSNVHVEGRKRK 286
+ + K ER A + + E R+
Sbjct: 569 RHIVEKAMREARERAAAEARMQAEREARQ 597
>07_03_1092 -
23903436-23903534,23903650-23903715,23903832-23903897,
23903984-23904187,23904284-23904688
Length = 279
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 311 SGCLLY*RPSVCVPRHGRSTKLS 243
SGCL Y P C P+HG S+ ++
Sbjct: 41 SGCLNYDVPPQCWPQHGHSSSVT 63
>04_03_0357 + 14852584-14853058,14853116-14855754
Length = 1037
Score = 27.9 bits (59), Expect = 8.2
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFIDEVD---SSIQ-KKRDLEYDQKYEEMVLKLIEFAKKDF 208
+EE + ERD+ + Q F+++V+ S Q K DLE+D E+ + + F
Sbjct: 751 IEEEQRERDRKNRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVPYKASAF 810
Query: 209 IYKGFDPLIERLKALSNVHVEGRKRKVVNIEDI 307
I L+E ++ V V + ++VN+E +
Sbjct: 811 IIPTSTCLVELIETPFLV-VTLSEIEIVNLERV 842
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +2
Query: 53 KMERDKYE--KEKTRLQTFIDEVDSSIQKKRDLEY--DQKYEEMVLKLI 187
K+ RD ++ KEK+ FIDE+D+ K+ D E D++ + +L+L+
Sbjct: 245 KLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELL 293
>02_01_0459 +
3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 29 HELVLEEIKMERDKYEKEKTRLQTF----IDEVDSSIQKKRDLEYDQKYEEMVLKLIEFA 196
HE L++I+++ + +KT+++ IDEV K DLE + E+ +
Sbjct: 104 HEKQLKQIRLDMEALRDDKTQMEVILDEKIDEVRKISSKVNDLEVQLRREKDECHRMTSK 163
Query: 197 KKDFI 211
K FI
Sbjct: 164 MKKFI 168
>01_05_0487 + 22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Frame = +2
Query: 107 DEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYKGFDPLIERLKALSNVHVEGRK-- 280
D+ + I+ R++E D+K E V + D+++ DP++ + L V G
Sbjct: 781 DQFTTYIEGLREIEKDEKIVEAVFPCVLKIIPDYVFNLKDPIVLGVDVLEGVAKVGTPLC 840
Query: 281 ------RKVVNIEDILNVYTQIDI 334
++ NI I N Q+D+
Sbjct: 841 LPSNGFARIGNIASIQNSSKQVDV 864
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 34 ARSRGDKDGKRQIREREDTPADLHR*SGQLDTEET-RSRVRSKIR 165
+ S D DG R+ R+R+D HR G D++E R + RSK R
Sbjct: 1130 SESDSDSDGDRKHRKRKDRKR--HRKHGHSDSDEAKRHKRRSKRR 1172
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,424,027
Number of Sequences: 37544
Number of extensions: 281981
Number of successful extensions: 1088
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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