Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1063
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27) 40 0.001
SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 32 0.51
SB_43015| Best HMM Match : Catalase-rel (HMM E-Value=3.4) 31 0.68
SB_27538| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_30357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21) 31 1.2
SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1) 31 1.2
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 31 1.2
SB_44733| Best HMM Match : Sof1 (HMM E-Value=3.4) 30 1.6
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 2.1
SB_57040| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.9) 30 2.1
SB_31936| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.1) 30 2.1
SB_28134| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_20300| Best HMM Match : hATC (HMM E-Value=0.036) 30 2.1
SB_11341| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_6514| Best HMM Match : hATC (HMM E-Value=0.024) 30 2.1
SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_51068| Best HMM Match : hATC (HMM E-Value=0.024) 30 2.1
SB_48175| Best HMM Match : hATC (HMM E-Value=0.024) 30 2.1
SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038) 30 2.1
SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_11985| Best HMM Match : hATC (HMM E-Value=0.022) 30 2.1
SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8) 29 2.7
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 3.6
SB_43487| Best HMM Match : K-box (HMM E-Value=0.79) 29 3.6
SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1) 29 3.6
SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6) 29 3.6
SB_55137| Best HMM Match : hATC (HMM E-Value=0.059) 29 4.8
SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 29 4.8
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 29 4.8
SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6) 29 4.8
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 29 4.8
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 28 6.3
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 28 6.3
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 6.3
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 28 6.3
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 28 6.3
SB_17953| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 28 6.3
SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 28 8.4
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 8.4
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_57061| Best HMM Match : Sec62 (HMM E-Value=0.27)
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2
Query: 32 ELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMV 175
E EEI+ R Y+KEK RL+ I E+ +Q+K +LE D++Y+ +V
Sbjct: 193 EKAKEEIEKARASYDKEKDRLEKLIKEMTDELQEK-ELENDRQYQTIV 239
>SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 65 DKYEKEKTRLQTFIDEVDSSIQKKRDLEY-DQKYEEMVLKLIEFAKKDFIYKGFDPLIER 241
++YE EK + + D+ + +K D EY D+KYEE K E+ KD+ K + +
Sbjct: 2 EEYEDEKYGDEEYEDK-EYEYEKYGDEEYEDKKYEEEKYKEEEYEDKDWNMKSKNMKTKN 60
Query: 242 LKALSNVHVEGRKRK 286
+K N + KRK
Sbjct: 61 IKTKKNT-TKNMKRK 74
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 32 ELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMV 175
E EEI+ Y+KEK RL+ ++ +Q+K +LE D++Y+++V
Sbjct: 761 EKAKEEIEKAWALYDKEKDRLEKINWQMTDELQEK-ELENDRQYQKIV 807
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 44 EEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMV 175
EEI+ Y+KEK RL+ ++ +Q+K +LE D++Y+ ++
Sbjct: 625 EEIEKAWTLYDKEKDRLEKINWQMTDELQEK-ELENDRQYQTII 667
>SB_43015| Best HMM Match : Catalase-rel (HMM E-Value=3.4)
Length = 285
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG ID +
Sbjct: 61 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIDGF 95
>SB_27538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 31.5 bits (68), Expect = 0.68
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG ID +
Sbjct: 61 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIDGF 95
>SB_23784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 31.1 bits (67), Expect = 0.90
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTI 658
DLT P+ Y N WWS +E + K QFG I
Sbjct: 182 DLTGQRPRSYSENRWWSKWE-VYKQMLLQFGDI 213
>SB_30357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 31 RARSRGDKDGKRQIREREDTPADLHR*SGQLDTEETRSRVRSK 159
RAR +K K+ +E+ED D HR +G + E SRV+ K
Sbjct: 65 RARKSTEKGCKKAEKEKEDREKDSHRETG-WEQENKESRVKEK 106
>SB_7977| Best HMM Match : MOZ_SAS (HMM E-Value=3.4e-21)
Length = 570
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 29 HELVLEEIKMERDKYEKEKTRLQTFIDEVDSSI 127
H+ +LE ++KYEKEK RL F +E ++ I
Sbjct: 427 HQDLLERELKNQEKYEKEKARLIKFTEEKNNEI 459
>SB_53370| Best HMM Match : GnRH (HMM E-Value=7.1)
Length = 244
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/89 (21%), Positives = 35/89 (39%)
Frame = +1
Query: 295 YRRHPERIHADRHHKIHIRGIVSLREVL*GNHKEIHAXXXXXXXXXXXXXXXLPQERGPQ 474
+R+H + + H H + V+ E G H++ H +E G
Sbjct: 148 HRQH--HVTYEEEHGTHRQQHVTYEEEH-GTHRQHHVTYEEEHGTHRQQHVTYEEEHGTH 204
Query: 475 REHNEQLDQKRQDQRRHSEAESQKHGDIR 561
R+H+ ++K R+H ++HG R
Sbjct: 205 RQHHVTYEEKHGTHRQHHVTYEEEHGTHR 233
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRD 142
+EEIK++ E+EK LQT + ++ I+K+++
Sbjct: 494 MEEIKLKMKAIEQEKLSLQTTVKSLEDEIKKEKE 527
>SB_44733| Best HMM Match : Sof1 (HMM E-Value=3.4)
Length = 287
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +2
Query: 59 ERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYKGFDPLIE 238
E+D+ + KT++ TFI + SI ++ + D++ E K E +K K FD E
Sbjct: 213 EKDQQTQLKTQIDTFILILQESILRRIIEDADKEEERKRKKRKEGERKSQFVKSFDTKEE 272
Query: 239 RLKALSNVHVEGRKR 283
K L +KR
Sbjct: 273 LRKKLEERESVEKKR 287
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFIDEV-DSSIQKKRDLE 148
L+ K +RDK+E EKT L + EV D I K++ E
Sbjct: 1521 LDGAKRDRDKFEMEKTSLDNRLREVEDDLIDKQKQKE 1557
>SB_57040| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.9)
Length = 269
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 140 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 174
>SB_31936| Best HMM Match : Glyco_hydro_65C (HMM E-Value=1.1)
Length = 291
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 67 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 101
>SB_28134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 140 DLTGQRPRSYSETRWWSKWE-VYKKMLLQFGDIEGF 174
>SB_20300| Best HMM Match : hATC (HMM E-Value=0.036)
Length = 423
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 134 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 168
>SB_11341| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 423
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 134 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 168
>SB_7188| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1094
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 674 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 708
>SB_6514| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 331 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 365
>SB_57822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 140 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 174
>SB_51068| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 281
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 22 DLTGQRPRSYSKTRWWSKWE-VYKQMLLQFGDIEGF 56
>SB_48175| Best HMM Match : hATC (HMM E-Value=0.024)
Length = 620
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 331 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 365
>SB_47551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 371 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 405
>SB_40436| Best HMM Match : EGF_CA (HMM E-Value=0.0038)
Length = 676
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 387 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 421
>SB_32909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 307 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 341
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 59 ERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYKGFDPLIE 238
E D + R +++ + +I +KRD E +EE + I+ A+ D + FD +E
Sbjct: 2183 ELDSQDLVSGRTANIVEKTERTIHEKRDCEDGVDWEEDRIISIQRARSDSLNTEFDDTVE 2242
>SB_11985| Best HMM Match : hATC (HMM E-Value=0.022)
Length = 865
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 384 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDIEGF 418
>SB_50659| Best HMM Match : PCMT (HMM E-Value=1.8)
Length = 398
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTIDNW 667
DLT P+ Y WWS +E + K QFG I+ +
Sbjct: 265 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGYIEGF 299
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.1 bits (62), Expect = 3.6
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFIDEVDSSIQKK----RDLEYDQKYEEMVLKLIEFAKKDF 208
++ +K DK EKEK L+ IDE+ + K D+E K + I F +
Sbjct: 1391 IDNLKAAIDKTEKEKEDLKADIDELKAENIKLNKLINDMEAGIKRTQTESDRIAFENESN 1450
Query: 209 IYKGFDPLIERLKALSNVHVEGRKRKVVNIEDILNVY 319
+ K + L ++ AL + + K K+ + ++LN +
Sbjct: 1451 V-KKIESLENQITALKK-NEQSNKEKINELRNMLNTH 1485
>SB_43487| Best HMM Match : K-box (HMM E-Value=0.79)
Length = 243
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +2
Query: 29 HELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYD---QKYEEMVLKLIEF-- 193
H L LE + + +LQ IDE++ +++K++ Y K +E++ +L E
Sbjct: 124 HSLRLEREALSLEYDHANFDKLQKLIDELEDVVKRKKEAIYGMELDKLQELIDQLEEAVK 183
Query: 194 AKKDFIYKGFDPLIER 241
K+D +Y G++ + +R
Sbjct: 184 TKEDKVY-GYEQVSQR 198
>SB_46753| Best HMM Match : Fimbrial_CS1 (HMM E-Value=1.1)
Length = 982
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 457 QERGPQREHNEQLDQKRQDQRRHSEAESQKHGDIRPDQDVPSRVLREQLVVYL*RHP-QK 633
Q+R ++ +Q Q R+ ++ + E Q H +PD+D + ++ P Q+
Sbjct: 869 QDREQEKPDKDQEKQDREQEKPDKDQEKQDHEQEKPDKDQEKQDREQEKTDKEREQPYQE 928
Query: 634 QGKP 645
Q KP
Sbjct: 929 QDKP 932
>SB_14622| Best HMM Match : DUF1441 (HMM E-Value=1.6)
Length = 426
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 420 LPWYSCVYFLMISL*YFSKRHNSSYVY 340
LPWY+ FL S+ F + HN ++ Y
Sbjct: 31 LPWYNAYRFLSQSIDQFQRVHNVNFAY 57
>SB_55137| Best HMM Match : hATC (HMM E-Value=0.059)
Length = 619
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTI 658
DLT P+ Y WWS +E + K QFG I
Sbjct: 330 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDI 361
>SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 17 RFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDS---SIQKKRDLEYDQKYEEMVL 178
RF G L E+ ER K EKE+ L D+++S ++QK+R + Q +E+ L
Sbjct: 185 RFEGTNRSLLEMLDERAKMEKERLALSARNDKLESLCRAMQKERLILNKQALDELKL 241
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 41 LEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQK-----YEEMVLKLIEFAKKD 205
+E++ K+++ KTR DE+D +K+ DL Q+ + + L E +K+
Sbjct: 188 VEDMAALAKKHKQLKTRNDDLQDELDQVTRKRDDLISTQRSLTRDVDHLTTSLEEVQRKN 247
Query: 206 FIYKGFDPLIERLKALSNVHVEGRKRKVVNIE 301
Y D + LK + N+ R+ K V I+
Sbjct: 248 RKYA--DEVDRLLKKIQNIEDSFREEKAVLIK 277
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTI 658
DLT P+ Y WWS +E + K QFG I
Sbjct: 1544 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDI 1575
>SB_41427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -3
Query: 383 PYNTSLRDTIPRMCIL*CRSACIRSGCLLY*RPSVCVPRHGRSTKLSVARLKDQSPCR*S 204
PY S+RD P C L C+ + L Y C +G+ KL + SPC+
Sbjct: 335 PYPISVRDITPNACRLACKHSKHAYAGLQYGYLCRCGDTYGKYAKLD--DFQCSSPCKGD 392
Query: 203 P 201
P
Sbjct: 393 P 393
>SB_40860| Best HMM Match : MAAL_N (HMM E-Value=0.6)
Length = 538
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 560 DLTRTYPQEYYANNWWSIYEDILKNRENQFGTI 658
DLT P+ Y WWS +E + K QFG I
Sbjct: 330 DLTGQRPRSYSETRWWSKWE-VYKQMLLQFGDI 361
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 RRXLQRFSGH-ELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDL 145
+R LQ S E V +++ ER+ + KEK Q D++++ I+K+R++
Sbjct: 79 QRMLQEKSDWLEQVERQMEQEREVFAKEKAEFQ---DQIENQIEKEREI 124
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/42 (23%), Positives = 27/42 (64%)
Frame = +1
Query: 451 LPQERGPQREHNEQLDQKRQDQRRHSEAESQKHGDIRPDQDV 576
L +E+ PQ+ +E+ QK +++++H E +K ++ ++++
Sbjct: 623 LKEEKPPQKITSEEQKQKERNRQKHREEMERKREKLQKEREL 664
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Frame = +1
Query: 454 PQERGPQREHNEQLDQKRQDQRRHSEAESQKHGD--IRPDQDVPSRVLREQLVVYL*RHP 627
P +GPQ + ++ + Q H +S GD RP Q+ P+ +Q V L +P
Sbjct: 378 PYAQGPQPQQSQHMAQNVSYPATHQHYQSSGQGDQGHRPQQNPPN----DQQHVGLGAYP 433
Query: 628 QKQGKPIRDY 657
Q P + Y
Sbjct: 434 PIQAHPTQPY 443
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 EEIK--MERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYK 217
+EIK +E+++ E+EK R++ ++S +KKR LE QK E I +K F+ +
Sbjct: 102 QEIKNEVEKERQEEEKRRMEIEKQRMES--EKKRILESKQKRIEESKDTIHDNEK-FLEE 158
Query: 218 GFDPLIERLK 247
L+E++K
Sbjct: 159 QRKRLVEKVK 168
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 460 ERGPQREHNEQLDQKRQDQRRHSEAESQK 546
E+ QRE N+QL Q+++++R+ E QK
Sbjct: 1119 EKKFQREENQQLRQQKEEERQTEWLEQQK 1147
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 44 EEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYD-QKYEEMVLKLIEFAKK 202
E ++ + +K +KEK RL+ E ++KK E + +K EE + IE KK
Sbjct: 353 ERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKKK 406
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 457 QERGPQREHNEQLDQKRQDQRRHSEAESQKHGDIRPDQDVPSRV 588
Q+RG QR+H Q Q Q QR+ S + QK +P Q + +V
Sbjct: 1795 QQRGRQRQHQGQ--QLHQGQRQQSTQQQQKQ---QPRQSLQKKV 1833
>SB_17953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 29 HELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMV 175
HE + E ++++D+YE +K + +++ D I R+ D +V
Sbjct: 6 HEAIKETGRIKQDEYEGQKEAFKPLVEKEDKEISDLREKYIDSMNRPIV 54
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2
Query: 41 LEEIKMERDKYEKEK----TRLQTFIDEVDSSIQKKRDLEYDQK 160
L+ K +RDKY+ EK RLQ++ DE++ ++K E + K
Sbjct: 1598 LDGAKRDRDKYQLEKEEAEKRLQSYEDELNEKQKQKEKAEDNLK 1641
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 44 EEIK--MERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAKKDFIYK 217
+EIK +E+++ E+EK R++ ++S +KKR LE QK E I +K F+ +
Sbjct: 220 QEIKNEVEKERQEEEKRRMEIEKQRMES--EKKRILESKQKRIEESKDTIHDNEK-FLEE 276
Query: 218 GFDPLIERLK 247
L+E++K
Sbjct: 277 QRKRLVEKVK 286
>SB_53470| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 192
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 457 QERGPQREHNEQLDQKR--QDQRRHSEAESQKHGDIRPDQD 573
++R P +E ++ D++R +D+ RH E + +H D R D++
Sbjct: 15 EKRVPGKEEEDRHDEERNDEDEDRHDEERNNEHED-RHDEE 54
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Frame = +2
Query: 2 RRXLQRFSGHELVLEEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEM--- 172
++ ++ +EEI+ K EK + RLQ + + +I ++ +E D E
Sbjct: 1320 KKLVREMEALNTTVEEIQGSNAKLEKTRKRLQNEMMAEEKAISERYAMERDNAEREARQN 1379
Query: 173 VLKLIEFAKKDFIYKGFDPLIERLKALSNVHVEG 274
K+I + + Y+ ERL+ L+ +EG
Sbjct: 1380 ETKVISLSHELEEYQDKLAESERLRKLAQTELEG 1413
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 47 EIKMERDKYEKEKTRLQTFIDEVDSSIQKKRD--LEYDQKYEEMVLKLIEFAKK 202
E K++ + EKEK + Q D+ +QK++D +E +++ +E V K +E K+
Sbjct: 526 EEKLKLAEEEKEKKKQQIQEDKEKKKLQKEKDRAVEREKREKERVQKKLEKDKE 579
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +2
Query: 32 ELVLEEIKMERDKYEKEKTRLQTFIDEVDSSI--QKKRDLEYDQKYEEMVLKLI 187
E+ LEE+K + E+E +L+ I+ D I Q+KR +Y ++ E++ KL+
Sbjct: 600 EIELEELKDNIEDLERENKKLKGEIECNDEMIQYQEKRINQYAEEIEKLEDKLM 653
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 23 SGHELVLEEIKMERDK-YEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYEEMVLKLIEFAK 199
+G+E + EIK E+D Y++ K +++ + KR +E+ + + K +E AK
Sbjct: 1190 TGYENTISEIKKEKDMLYDEVKHLKDIRAQQLEEIEELKRQIEHMRDVQNNYQKELE-AK 1248
Query: 200 KDFIYKGFDPLIERLKALSNV 262
D ++ D E ++ L ++
Sbjct: 1249 DDSLHYLQDSKKEMMRELEDL 1269
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +2
Query: 44 EEIKMERDKYEKEKTRLQTFIDEVDSSIQKKRDLEYDQKYE-----EMVLKLIEFAKKDF 208
+ +K + D + RLQ +DE++ + K + L +++ + E + K + + F
Sbjct: 1397 DRLKNQNDFLLSQGKRLQARVDELEQELGKVKSLLVEKQLKKEIVVESISKTSDINLESF 1456
Query: 209 IYKGFDPLIERLKALSNVHVEGRKRKVVNIEDI 307
PL E L NV + ++++NI+D+
Sbjct: 1457 PNNDIQPLNESLMMQQNVK---QMQELLNIKDM 1486
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,294,550
Number of Sequences: 59808
Number of extensions: 343218
Number of successful extensions: 1601
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1590
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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