Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1061
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    26   0.90 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   2.7  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     24   3.6  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.4  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 25.8 bits (54), Expect = 0.90
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 250 HKHRSPSSSNPSLATKGSTSELTHRH 327
           H H SP   +P + +  + + LTH H
Sbjct: 473 HSHHSPHHVSPGMGSTVNGASLTHSH 498


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 205  PHYGFSRSINGAFRHH-KHRSPSSSNPS 285
            PH    RS NG FR+  +H+  S  N S
Sbjct: 2463 PHSSLFRSYNGPFRNSPEHKGSSQRNCS 2490


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +1

Query: 262 SPSSSNPSLATKGSTSELTHRHSPVSFSPDLLSGS--RFRSGGRFCEA 399
           SP + N  +     +     R+ P+SF  D  SGS   F    R C A
Sbjct: 65  SPVNENIVIRLADGSRPWWERYQPISFKLDTRSGSEAEFADMSRRCNA 112


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 209 ITDSPDPLTVLLGTTSTGH 265
           + DSP P T+L    S+G+
Sbjct: 531 MNDSPSPTTILTSVNSSGN 549


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 256 HRSPSSSNPSLATKGSTSELTHRH 327
           H  PSS  P ++++ +T+ + H H
Sbjct: 524 HLLPSSLYPPVSSESTTAPIFHTH 547


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,594
Number of Sequences: 2352
Number of extensions: 11801
Number of successful extensions: 265
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)