Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1060
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 113 1e-25
11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755 32 0.50
08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437 31 0.88
08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505 31 1.2
06_01_1156 + 9788711-9788759,9788910-9789142,9790146-9791919,981... 31 1.2
05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274 31 1.2
05_02_0002 - 5476472-5476485,5486918-5488655 31 1.2
04_04_0356 - 24658223-24660613 31 1.2
03_01_0614 + 4515515-4515540,4515988-4516209,4516681-4516768,451... 31 1.2
09_02_0213 - 5842150-5842261,5842729-5842925 30 1.5
12_02_0417 - 18896949-18897269,18897340-18897424,18899561-188996... 30 2.0
10_02_0180 + 6292190-6292654,6293923-6294915 30 2.0
07_03_0375 + 17408815-17409035,17422820-17423477,17423780-174241... 30 2.0
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 29 3.5
11_03_0072 + 9605273-9606814,9616982-9617016,9617271-9617348,961... 29 4.7
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 29 4.7
04_03_0245 - 13331603-13332111,13332653-13333025 29 4.7
02_01_0223 + 1453478-1453750,1455788-1456018,1456066-1456200,145... 29 4.7
01_07_0353 + 42962769-42962972,42963062-42963138,42963571-429638... 29 4.7
11_04_0166 + 14317129-14317962,14318042-14318809,14319008-143197... 28 6.2
09_06_0348 + 22452219-22452360,22452791-22452912,22453342-224534... 28 6.2
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 8.2
03_05_0086 - 20642873-20643033,20643384-20643504,20643698-206437... 28 8.2
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 113 bits (272), Expect = 1e-25
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Frame = +3
Query: 120 TEYWVISAPGD---KTCQQTWDTLNNATKSGNLSVN-YKFPIPDLKVGTLDQLVGLSDDL 287
T YW++S P T W L ++ + Y+F +PDL+VGTLD L+ LSDDL
Sbjct: 3 TRYWIVSLPVQTPGSTANSLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLALSDDL 62
Query: 288 GKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSL 467
K + F+EGV+ K+ + + E LE L + + TYLTRF WD KYP L
Sbjct: 63 VKSNVFIEGVSHKIRRQIEE-LERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTMSPL 121
Query: 468 RNIADIISKQVGQIDADLKVKXSAYNALKGNLHNLXKKQTREL 596
+ I I QV +I+ D+KV+ + YN ++ L + +KQT L
Sbjct: 122 KEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSL 164
>11_01_0809 + 7201431-7202243,7202646-7203347,7216678-7216755
Length = 530
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAK 446
++DDLG++ D + + K A L ++LED R L+ + L T L QW AK
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW-KAK 174
Query: 447 YPIKQSLRNIADIISKQVGQIDADLKVKXSAYNALK 554
+ S + D++ + + K+ + Y A K
Sbjct: 175 NGV--SDKAFGDLLKRIKNILPGGNKLPETTYEAKK 208
>08_01_0788 + 7617929-7617969,7619848-7621622,7635250-7635437
Length = 667
Score = 31.1 bits (67), Expect = 0.88
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D+ + + K A L ++LED R L+ + L T L QW
Sbjct: 130 VADDLGQMLQDSREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 185
>08_02_0838 - 21662721-21662759,21672016-21673355,21673566-21674505
Length = 772
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>06_01_1156 +
9788711-9788759,9788910-9789142,9790146-9791919,
9819418-9819743
Length = 793
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 210 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 265
>05_05_0178 - 23007705-23007722,23007770-23008582,23010227-23010274
Length = 292
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 132 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 187
>05_02_0002 - 5476472-5476485,5486918-5488655
Length = 583
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>04_04_0356 - 24658223-24660613
Length = 796
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 116 VADDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 171
>03_01_0614 +
4515515-4515540,4515988-4516209,4516681-4516768,
4517084-4517123,4517259-4517305,4517464-4517584,
4517931-4518091
Length = 234
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/43 (30%), Positives = 29/43 (67%)
Frame = +3
Query: 351 LEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 479
L+++ ++LH+ + + DLPT++ +++ A Y KQ+L ++A
Sbjct: 187 LDEESEELHQKFLEKDIDLPTFVQKYKKLRAAYH-KQALLHLA 228
>09_02_0213 - 5842150-5842261,5842729-5842925
Length = 102
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 404 PTHLFDSLPMGHG*VPHKAESAEYRRHHKQTGRTDRRGSEGQ 529
P H +L H VPH A+ R H +Q ++RG EG+
Sbjct: 13 PRHAVQTLLCRHAAVPHVGRRAQ-RAHRRQPTTRNQRGKEGK 53
>12_02_0417 -
18896949-18897269,18897340-18897424,18899561-18899656,
18900418-18900476,18901285-18901359
Length = 211
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 191 GIVQGIPSLLTGLVARGTDH 132
G+V GIP LL G + RG DH
Sbjct: 161 GVVNGIPQLLQGEMHRGADH 180
>10_02_0180 + 6292190-6292654,6293923-6294915
Length = 485
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +1
Query: 52 KLFAVSDNLL*TALIFKFLW*K*LNTG*SVPLATRPVSRLGIP*TMPPNQATSVSTINSL 231
+++ VSD T + KF W + G +PLA S+LG T N A VST+ S+
Sbjct: 396 RVYEVSDIKWTTVNLLKFGWAEFAGGG--IPLAGDLTSKLGSDHTRCKNSAGEVSTVVSM 453
Query: 232 FL 237
L
Sbjct: 454 LL 455
>07_03_0375 +
17408815-17409035,17422820-17423477,17423780-17424161,
17424236-17424550,17424727-17425118,17432479-17432508
Length = 665
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 138 VADDLGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 193
>08_02_0204 -
14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
+++DLG++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 451 VAEDLGQMLQDAREDCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLELLQW 506
>11_03_0072 +
9605273-9606814,9616982-9617016,9617271-9617348,
9617427-9617501,9617583-9617657,9617731-9617977,
9618070-9618313,9618852-9619309,9619388-9619675,
9619751-9619788,9619882-9620452
Length = 1216
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 279 DDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
DDLG++ D + + K A L +LED R L+ + L T L QW
Sbjct: 118 DDLGQMLQDAKEDCESEKEAHKLERMLEDHRTSLYPGYEQGHKKLDTTLEFLQW 171
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 199 QATSVSTINSLFLTLRWELWISWWGCQMIWAS-LILSS 309
Q ++ ++ LFL ++ SWW C M W L+L++
Sbjct: 304 QEKALVSLAKLFLEFKYAPTPSWWDCTMYWLDRLVLAA 341
>04_03_0245 - 13331603-13332111,13332653-13333025
Length = 293
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKLDTFVEGV--TRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DDLG++ V + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDLGQMLQDAREVCESEKEAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>02_01_0223 +
1453478-1453750,1455788-1456018,1456066-1456200,
1457918-1457971,1458417-1458482,1458593-1458679,
1459338-1459394,1459470-1459500,1459577-1459634,
1459710-1459761,1459881-1459917,1460008-1460210,
1460556-1460633,1460683-1460853,1461126-1461239
Length = 548
Score = 28.7 bits (61), Expect = 4.7
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Frame = +3
Query: 189 ATKSGNLS---VNYKFPIPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVA-QYLGEVLE 356
A +GN+ + + P+P + G LV G + F TRK+ G+V +
Sbjct: 52 AAAAGNVQRRGFSVQVPVPVERPGPGPVLVPCPQGDGGVQGF-RWYTRKLRIDEDGDVAD 110
Query: 357 DQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKXS 536
+ D++ + NN P +Y +K + ++ A + KQ+ ID D+
Sbjct: 111 EFLDEVVPEISINNDSTPA---------GRYQVKYNTKSAALAMRKQISVIDGDICHSLE 161
Query: 537 AYNALKGNLHNLXKKQTRE 593
L+ N +L K +E
Sbjct: 162 YQGRLRWNCQSLLAKGLQE 180
>01_07_0353 +
42962769-42962972,42963062-42963138,42963571-42963817,
42963907-42964476,42964998-42965171,42965514-42965640,
42965719-42965828,42966707-42966907,42966999-42967966,
42968110-42968358,42968760-42969105
Length = 1090
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 511 SICPTCLLMMSAIFRRLC 458
S+CP CL ++S F+RLC
Sbjct: 199 SVCPNCLPLISKHFQRLC 216
>11_04_0166 +
14317129-14317962,14318042-14318809,14319008-14319740,
14353399-14353892,14353971-14354417,14354505-14355110,
14355204-14355391,14355470-14355640,14355723-14355810
Length = 1442
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 273 LSDDLGKL--DTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQW 434
++DD G++ D + + K A L ++LED R L+ + L T L QW
Sbjct: 37 VADDFGQMLQDAKEDCESEKGAHKLDKMLEDHRTSLYPGCEQGHKKLDTTLEFLQW 92
>09_06_0348 +
22452219-22452360,22452791-22452912,22453342-22453436,
22453691-22453844,22453952-22454014,22454329-22454478,
22454650-22454982,22455086-22455820
Length = 597
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 452 HKAESAEYRRHHKQTGRTDRRGSEGQVLRLQRSQRKSTQFXEETDPGAY*PRN--LADLV 625
H + +R Q+ R+ +E + + + QRK + EE D PR A +
Sbjct: 216 HSSGETAHRTDEIQSFRSTTERAEELMEEIDKLQRKLKELQEEDDRSILSPRQKAAAASL 275
Query: 626 KKEHFILDSEYPD 664
KKE + YP+
Sbjct: 276 KKEKRLSTGRYPE 288
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 119 HFHHKNLKINAVYNKLSETANNFGETTRQFGTSPSTP*K 3
H HH L+ + + E +G T+Q SPS P K
Sbjct: 160 HHHHPQLQQLLPWEEAEEERRRYGGATQQLRLSPSGPRK 198
>03_05_0086 -
20642873-20643033,20643384-20643504,20643698-20643744,
20643882-20643921,20644331-20644418,20644949-20645161,
20645589-20645628,20646332-20646416
Length = 264
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 333 QYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIA 479
Q L L+++ ++LH+ + + DLPT++ + + Y KQ+L ++A
Sbjct: 211 QKLMAKLDEESEELHQKFLEKDIDLPTFVQKHKKLRTAYH-KQALLHLA 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,199,669
Number of Sequences: 37544
Number of extensions: 390090
Number of successful extensions: 1096
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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