Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1059
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...   168   1e-43
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...   165   7e-43
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       79   1e-16
AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.       69   9e-14
AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.       57   4e-10
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   3.3  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    24   3.3  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   5.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   5.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.5  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.5  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    23   10.0 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   10.0 

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score =  168 bits (409), Expect = 1e-43
 Identities = 81/151 (53%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
 Frame = +3

Query: 102 THSKVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDI 281
           T  KVLCYYD  + +RE   ++   D++ AL FCTHL+YGYAG+  +TY+L SLNE+LD+
Sbjct: 29  TGPKVLCYYDGSNALREGLGKVTVSDIELALPFCTHLMYGYAGVNAETYRLRSLNEDLDL 88

Query: 282 DRTHDNYRAITSLKAKYPGLTVLLSVGG--DADTEEP-EKYNLLLESQQARTAFINSGVL 452
           D    ++RA+T+LK +YPGL V LSVG   D   E+P EKY  LLES  +RTAF+NS   
Sbjct: 89  DSGKSHFRAVTTLKRRYPGLKVFLSVGNYRDLGEEKPFEKYLTLLESGGSRTAFVNSAYS 148

Query: 453 LAEQYGFDGIDLAWQFPRVKPKKIRSTWGSL 545
           L + Y FDG+DLAWQFP+ KPK+IR   G +
Sbjct: 149 LLKTYEFDGLDLAWQFPQTKPKRIRGWTGKV 179


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score =  165 bits (402), Expect = 7e-43
 Identities = 80/146 (54%), Positives = 98/146 (67%)
 Frame = +3

Query: 108 SKVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDR 287
           SKVLCYYD+ +++ E   ++   D+D AL FCTHL+YGYAGI  +T K VS   NLD+D 
Sbjct: 26  SKVLCYYDAANFLIEGLGKVSLADIDAALPFCTHLVYGYAGIDVETNKAVSRQPNLDLDT 85

Query: 288 THDNYRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQY 467
              NYR +T LK+KYP L VLL +GG   +E   KY  LLES  AR  FINS   L + Y
Sbjct: 86  GKGNYRTVTQLKSKYPSLKVLLGLGGYKFSEPSIKYLTLLESGAARITFINSVYSLLKTY 145

Query: 468 GFDGIDLAWQFPRVKPKKIRSTWGSL 545
           GFDG+DL WQFP  KPKK+RST G +
Sbjct: 146 GFDGVDLEWQFPMNKPKKVRSTLGGV 171


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 78.6 bits (185), Expect = 1e-16
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
 Frame = +3

Query: 111 KVLCYYDSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPD-TYKLVSLNENLDIDR 287
           KV+CY  + +  R    R     +DP+L  CTHL+YG+ GI  D T +++    +L+ + 
Sbjct: 32  KVVCYVGTWAVYRPGNGRYDIEHIDPSL--CTHLMYGFFGINEDATVRIIDPYLDLEENW 89

Query: 288 THDNYRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQY 467
              + +    LK   PGL  L ++GG    E   K++ +  S + R  FI+  V   +++
Sbjct: 90  GRGHIKRFVGLKNVGPGLKTLAAIGGW--NEGSRKFSAMAASGELRKRFISDCVAFCQRH 147

Query: 468 GFDGIDLAWQFP 503
           GFDGIDL W++P
Sbjct: 148 GFDGIDLDWEYP 159


>AF026494-1|AAB81852.1|  113|Anopheles gambiae chitinase protein.
          Length = 113

 Score = 69.3 bits (162), Expect = 9e-14
 Identities = 40/119 (33%), Positives = 65/119 (54%)
 Frame = +3

Query: 138 SYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITS 317
           ++ R+   + LP D+D  L  CTH++YG+A +  +   +   +   DID     Y  +  
Sbjct: 2   AWYRQGNGKYLPEDIDSDL--CTHVVYGFAVLDREALTIKPHDSWADIDNRF--YERVVE 57

Query: 318 LKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 494
           LK K  G  V +++GG  D+   +KY+ L+ S QAR  FI + +   ++Y FDG+DL W
Sbjct: 58  LKKK--GKKVTVAIGGWNDSAG-DKYSRLVRSSQARKRFIENVMKFIDKYNFDGLDLDW 113


>AF026493-1|AAB81851.1|  112|Anopheles gambiae chitinase protein.
          Length = 112

 Score = 57.2 bits (132), Expect = 4e-10
 Identities = 33/98 (33%), Positives = 54/98 (55%)
 Frame = +3

Query: 201 CTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPGLTVLLSVGGDADTE 380
           CTH++YG+A +   T  + + +   DID     Y  + + K K  G+ V L++GG  D+ 
Sbjct: 21  CTHIVYGFAVLDYSTLTIKTHDSWADIDNKF--YTRVVAAKEK--GVKVTLAIGGWNDSA 76

Query: 381 EPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAW 494
             +KY+ L+ +  AR  F+   +   E+YGFDG+D  W
Sbjct: 77  G-DKYSRLVRTS-ARAKFVEHVIGFLEKYGFDGLDFDW 112


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = -1

Query: 246 RCQAGYRHSRTASGCRTTERDRGPTAACGLEIL*HSSCCRSNKVLCCG 103
           RC         AS CR+T   +     CGL      SC    K   CG
Sbjct: 507 RCFRCLEMGHIASNCRSTADRQNLCIRCGLTGHKARSCQNEAKCALCG 554


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/23 (39%), Positives = 18/23 (78%)
 Frame = +3

Query: 360 GGDADTEEPEKYNLLLESQQART 428
           GG++D+ + E+ NL+ E++ AR+
Sbjct: 106 GGESDSNDDEEDNLIDENRYARS 128


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = -3

Query: 496 CQARSIPSKPYC-----SANSTPELMKA----VRACCDSSRRLYFSGSSVSASPPTDNNT 344
           C  +S PS P+      S  ST  +  A    V AC  ++     SG+S ++SP  D  +
Sbjct: 7   CSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMS 66

Query: 343 V 341
           V
Sbjct: 67  V 67


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
 Frame = -3

Query: 496 CQARSIPSKPYC-----SANSTPELMKA----VRACCDSSRRLYFSGSSVSASPPTDNNT 344
           C  +S PS P+      S  ST  +  A    V AC  ++     SG+S ++SP  D  +
Sbjct: 7   CSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTSTTSTSGASAASSPTRDEMS 66

Query: 343 V 341
           V
Sbjct: 67  V 67


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -1

Query: 330 TWLSSW*SHGSCRV 289
           +WLSS+ S+ SCRV
Sbjct: 643 SWLSSYLSNRSCRV 656


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 14/45 (31%), Positives = 17/45 (37%)
 Frame = +1

Query: 124 TTTAGAMSENLKPACCRWTSIPLCRSAPTCCTAMPVSSLTPISWC 258
           T   G MSE+  P         L R +P+     PV    P  WC
Sbjct: 270 TPPPGYMSEDGDPLDQNDNMTDLSRMSPSEMDTQPVMYHEPTFWC 314


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +1

Query: 109 AKYFVTTTAGAMSENLKPACCRWTSIP-LCRSAPTCC 216
           A+YFVT  A A + N    C +   +P L  +A  CC
Sbjct: 95  ARYFVTDPADAYNVNRTETCLQ--ELPALELNAEKCC 129


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 487 SPGSSQELSLRRSARPGDRFWH 552
           SPG++   + R    PG  FWH
Sbjct: 403 SPGTTFRYTFRAD-NPGTHFWH 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,125
Number of Sequences: 2352
Number of extensions: 11848
Number of successful extensions: 42
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)