Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1057
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.76 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   4.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.0  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   9.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   9.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 407  PSPPEILTSPSCRAIKTSHFH 345
            P+PP++ T     A  T H H
Sbjct: 1012 PAPPQVTTGVDTGASSTEHMH 1032


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 299 IFIVIPHTLINKLWFHFGSDS 237
           IFI+IP TL +  +F  G +S
Sbjct: 501 IFIIIPVTLTSVCYFMIGLNS 521


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 200 VFCRTRGTCFQWIYAFS 150
           VFCR R   + + YAFS
Sbjct: 112 VFCRDRVNPYLFYYAFS 128


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -3

Query: 127 EEELFDAIDGLFG 89
           +E+L+DAI+ L+G
Sbjct: 337 KEKLYDAIEALYG 349


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 423 IAGCXTFTSRNIN 385
           ++GC T TS NIN
Sbjct: 345 MSGCSTSTSTNIN 357


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 260 WFHFGSDSIVLIFVWYRHKFVFCRTRGTCFQWIYAFSF 147
           +F FG+++I +  V+    ++  R      ++IY   F
Sbjct: 89  YFIFGAETIFVTMVFKERLYLILRPGKRFDEYIYGIIF 126


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = -2

Query: 260 WFHFGSDSIVLIFVWYRHKFVFCRTRGTCFQWIYAFSF 147
           +F FG+++I +  V+    ++  R      ++IY   F
Sbjct: 89  YFIFGAETIFVTMVFKERLYLILRPGKRFDEYIYGIIF 126


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 191 CKRRICDDTRRR*EQCCRSQNG 256
           C    CD+   R  +CC++  G
Sbjct: 89  CPEPTCDEPVHRPGRCCKTCPG 110


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 440 SSITCASXXAXPSPPEILTSPS 375
           SS+T       PSP   + SPS
Sbjct: 691 SSLTSPGGMVLPSPSTSVASPS 712


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 440 SSITCASXXAXPSPPEILTSPS 375
           SS+T       PSP   + SPS
Sbjct: 583 SSLTSPGGMVLPSPSTSVASPS 604


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 299 IFIVIPHTLINKLWFHFGSDS 237
           IFI+IP  L +  +F  G +S
Sbjct: 501 IFIIIPVILTSVCYFMIGLNS 521


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,566
Number of Sequences: 336
Number of extensions: 1543
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)