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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1057
         (450 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.              33   0.60 
U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.              33   0.60 
BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.        33   0.60 
BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.        33   0.60 
AY714037-4|AAU02920.1|  227|Homo sapiens cytochrome c oxidase su...    31   2.4  
AK091467-1|BAC03669.1|  619|Homo sapiens protein ( Homo sapiens ...    30   4.2  
AK055949-1|BAB71053.1|  352|Homo sapiens protein ( Homo sapiens ...    30   4.2  
AB067504-1|BAB67810.2|  702|Homo sapiens KIAA1917 protein protein.     30   4.2  
Y14318-1|CAA74699.1|  606|Homo sapiens peroxisomal ABC-transport...    29   5.5  
CR457104-1|CAG33385.1|  606|Homo sapiens ABCD4 protein.                29   5.5  
BT007412-1|AAP36080.1|  606|Homo sapiens ATP-binding cassette, s...    29   5.5  
BC012815-1|AAH12815.1|  606|Homo sapiens ATP-binding cassette, s...    29   5.5  
AF009746-1|AAB83967.1|  606|Homo sapiens peroxisomal membrane pr...    29   5.5  
AP008747-4|BAE13699.1|  227|Homo sapiens cytochrome oxydase subu...    29   7.3  
U12693-1|AAA20846.1|  227|Homo sapiens cytochrome oxidase subuni...    29   9.7  
EF657504-4|ABR96516.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
EF093554-4|ABL61830.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ282474-4|ABB79225.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ282473-4|ABB79212.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ282472-4|ABB79199.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ246818-4|ABB45497.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ112914-4|AAZ02753.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ112902-4|AAZ02597.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ112879-4|AAZ02298.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ112794-4|AAZ01193.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
DQ112789-4|AAZ01128.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
AY714004-4|AAU02491.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
AP008678-4|BAE12802.1|  227|Homo sapiens cytochrome oxydase subu...    29   9.7  
AP008623-4|BAE12087.1|  227|Homo sapiens cytochrome oxydase subu...    29   9.7  
AP008495-4|BAE10421.1|  227|Homo sapiens cytochrome oxydase subu...    29   9.7  
AP008370-4|BAE08796.1|  227|Homo sapiens cytochrome oxydase subu...    29   9.7  
AF347013-4|AAK17860.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
AF347012-4|AAK17847.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  
AF347008-4|AAK17795.1|  227|Homo sapiens cytochrome c oxidase su...    29   9.7  

>Y10931-1|CAA71861.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 223  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 53
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>U49240-1|AAC50667.1| 1142|Homo sapiens symplekin protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 223  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 53
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006567-1|AAH06567.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 223  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 53
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>BC006536-1|AAH06536.1| 1142|Homo sapiens SYMPK protein protein.
          Length = 1142

 Score = 32.7 bits (71), Expect = 0.60
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = -3

Query: 223  SSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLE 53
            SS   + S  A P  P S  +  FR  GP CE   +F ++D   GL  A  ++  LE
Sbjct: 1036 SSSSPSPSPSARPGPPPSEEAMDFREEGPECETPGIFISMDDDSGLTEAALLDSSLE 1092


>AY714037-4|AAU02920.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++S I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIISLICFLVLYALFLTLTTKLTN 52


>AK091467-1|BAC03669.1|  619|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34148 fis, clone FCBBF3012546. ).
          Length = 619

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 229 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 50
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 455 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 512

Query: 49  RS 44
            S
Sbjct: 513 LS 514


>AK055949-1|BAB71053.1|  352|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31387 fis, clone NT2NE1000018, weakly similar to
           SUPPRESSOR PROTEIN SRP40. ).
          Length = 352

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 229 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 50
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 166 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 223

Query: 49  RS 44
            S
Sbjct: 224 LS 225


>AB067504-1|BAB67810.2|  702|Homo sapiens KIAA1917 protein protein.
          Length = 702

 Score = 29.9 bits (64), Expect = 4.2
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = -3

Query: 229 SSSSGIVTNSSFAEPEGPASSGSTHFRFAGPLCEEEELFDAIDGLFGLLTATGVEEGLES 50
           SS +G   +S+ + PEGPASS       +  +   +   D +  + G   A G EE  E+
Sbjct: 516 SSCTGTPLSSTISSPEGPASSSLAQSVMS--MASSQISTDTVSSMSGSYIAPGTEEEGEA 573

Query: 49  RS 44
            S
Sbjct: 574 LS 575


>Y14318-1|CAA74699.1|  606|Homo sapiens peroxisomal ABC-transporter
           protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 252 FWERQHCSHLRLVSSQIRLLQNQRDLLPVDLRIFVSLVHF 133
           F+   H  H+R      RLLQ QR+L+  +L +++ +  F
Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTF 277


>CR457104-1|CAG33385.1|  606|Homo sapiens ABCD4 protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 252 FWERQHCSHLRLVSSQIRLLQNQRDLLPVDLRIFVSLVHF 133
           F+   H  H+R      RLLQ QR+L+  +L +++ +  F
Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTF 277


>BT007412-1|AAP36080.1|  606|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 4 protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 252 FWERQHCSHLRLVSSQIRLLQNQRDLLPVDLRIFVSLVHF 133
           F+   H  H+R      RLLQ QR+L+  +L +++ +  F
Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTF 277


>BC012815-1|AAH12815.1|  606|Homo sapiens ATP-binding cassette,
           sub-family D (ALD), member 4 protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 252 FWERQHCSHLRLVSSQIRLLQNQRDLLPVDLRIFVSLVHF 133
           F+   H  H+R      RLLQ QR+L+  +L +++ +  F
Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTF 277


>AF009746-1|AAB83967.1|  606|Homo sapiens peroxisomal membrane
           protein 69 protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -1

Query: 252 FWERQHCSHLRLVSSQIRLLQNQRDLLPVDLRIFVSLVHF 133
           F+   H  H+R      RLLQ QR+L+  +L +++ +  F
Sbjct: 238 FYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTF 277


>AP008747-4|BAE13699.1|  227|Homo sapiens cytochrome oxydase subunit
           II protein.
          Length = 227

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 12/40 (30%), Positives = 23/40 (57%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP  + + T H H  +++  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMKELITFHDHALMIIFLICFLVLYALFLTLTTKLTN 52


>U12693-1|AAA20846.1|  227|Homo sapiens cytochrome oxidase subunit
           II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>EF657504-4|ABR96516.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>EF093554-4|ABL61830.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ282474-4|ABB79225.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>DQ282473-4|ABB79212.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>DQ282472-4|ABB79199.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>DQ246818-4|ABB45497.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ112914-4|AAZ02753.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ112902-4|AAZ02597.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ112879-4|AAZ02298.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ112794-4|AAZ01193.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>DQ112789-4|AAZ01128.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>AY714004-4|AAU02491.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>AP008678-4|BAE12802.1|  227|Homo sapiens cytochrome oxydase subunit
           II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>AP008623-4|BAE12087.1|  227|Homo sapiens cytochrome oxydase subunit
           II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>AP008495-4|BAE10421.1|  227|Homo sapiens cytochrome oxydase subunit
           II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>AP008370-4|BAE08796.1|  227|Homo sapiens cytochrome oxydase subunit
           II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


>AF347013-4|AAK17860.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>AF347012-4|AAK17847.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +++  I F+I+ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMIIFLICFLILYALFLTLTTKLTN 52


>AF347008-4|AAK17795.1|  227|Homo sapiens cytochrome c oxidase
           subunit II protein.
          Length = 227

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 386 TSPSCRAIKTSHFHIRIVLSXISFVIVRAIFIVIPHTLIN 267
           TSP    + T H H  +V+  I F+++ A+F+ +   L N
Sbjct: 13  TSPIMEELITFHDHALMVIFLICFLVLYALFLTLTTKLTN 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,670,231
Number of Sequences: 237096
Number of extensions: 980557
Number of successful extensions: 6396
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 6305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6396
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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