Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1055
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   1.3  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   1.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   1.8  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   4.0  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   7.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.4  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 188 NGDPNPTRSGLRVPATITW 244
           NGDPNPT     +   +TW
Sbjct: 474 NGDPNPTEENPLI--NVTW 490


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 188 NGDPNPTRSGLRVPATITW 244
           NGDPNPT     +   +TW
Sbjct: 474 NGDPNPTEENPLI--NVTW 490


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 327 IIGGQVXQPLLGEVMDXEERVSGXSDAVQV 238
           + GGQV  PL+G + +    +S   +A  V
Sbjct: 438 VCGGQVKYPLIGAMREELRGISRGKNAKDV 467


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/57 (21%), Positives = 20/57 (35%)
 Frame = +1

Query: 121 NECTSACGTSXFRSXXFNYLRRKRXPESXKIWTPSARDNNLDSITXPRYPFFXVHNL 291
           N C   C T+ +     + L+R       ++W    R   L  +     PF   + L
Sbjct: 83  NLCRKNCFTTDYFKGCIDTLQRSDEEAQIQLWIKQIRGAELGGLGTLIAPFLFSNTL 139


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 240 VIVAGTRSPDLVGFGSPFPP 181
           +I+AG  SP ++G+   F P
Sbjct: 32  LIIAGCVSPFVIGYVKHFHP 51


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 182 GGNGDPNPTRSGLRVPA 232
           GG   P P RS   +PA
Sbjct: 327 GGRRGPGPARSRRHLPA 343


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,762
Number of Sequences: 336
Number of extensions: 1272
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)