Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1054
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3CR56 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  

>UniRef50_A3CR56 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus sanguinis SK36|Rep: Putative
           uncharacterized protein - Streptococcus sanguinis
           (strain SK36)
          Length = 304

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -2

Query: 283 LSLIL*FTYHYEVEKPKVPYKLVLHVEPYNIQKKKK*LLKMFSQLMLIAILWN--FHLFY 110
           L+++L F Y Y        ++ ++      + K ++    M   L LIA ++N  FHLFY
Sbjct: 127 LAMLLLFVYFYNALMSDANFQEIMGTWLIWVAKNQEKTASMLFLLFLIAPMFNLVFHLFY 186

Query: 109 AYFI 98
           +YFI
Sbjct: 187 SYFI 190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,617,879
Number of Sequences: 1657284
Number of extensions: 9799579
Number of successful extensions: 19019
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 18441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19003
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)