Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1054
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   4.0  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            24   4.0  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   4.0  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   4.0  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   4.0  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   9.2  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 161 VFATDVNCNFMEFSSILCLF 102
           ++  ++ C F  FSS LC F
Sbjct: 185 IYIQEICCRFFTFSSSLCCF 204


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 79  RFKTHKI*NKHKIDENSIKLQLTSVAKTS*GVTFSFSV 192
           +F  HKI   +  DE  +K   + +AKT  GVT + S+
Sbjct: 65  QFPLHKI--SYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 79  RFKTHKI*NKHKIDENSIKLQLTSVAKTS*GVTFSFSV 192
           +F  HKI   +  DE  +K   + +AKT  GVT + S+
Sbjct: 65  QFPLHKI--SYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 79  RFKTHKI*NKHKIDENSIKLQLTSVAKTS*GVTFSFSV 192
           +F  HKI   +  DE  +K   + +AKT  GVT + S+
Sbjct: 65  QFPLHKI--SYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +1

Query: 79  RFKTHKI*NKHKIDENSIKLQLTSVAKTS*GVTFSFSV 192
           +F  HKI   +  DE  +K   + +AKT  GVT + S+
Sbjct: 65  QFPLHKI--SYCADEKGVKKFFSFIAKTGTGVTPTSSI 100


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +2

Query: 581 VFSNRWLRAVPSIISFSN 634
           +++NRWLR + S+I F N
Sbjct: 265 IWNNRWLRTI-SVILFLN 281


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,117
Number of Sequences: 2352
Number of extensions: 10648
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)