Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1054
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH0914...    31   2.0  
AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA ...    31   2.0  
AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p pro...    30   3.5  
BT011014-1|AAR30174.1|  139|Drosophila melanogaster RH62559p pro...    29   4.6  
AE013599-2308|AAF57982.2|  139|Drosophila melanogaster CG8317-PA...    29   4.6  

>AF145655-1|AAD38630.1|  667|Drosophila melanogaster BcDNA.GH09147
           protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 160 FSQLMLIAILWNFHLFYAYFIFYVS*ILY*ILTINRIDQKSKH 32
           F QL  + +L+ F LF+A+F+F +S  LY + +I   D + +H
Sbjct: 5   FQQLKKLWLLYLFLLFFAFFMFAISINLY-VASIQGGDAEMRH 46


>AE013599-297|AAF59298.1|  667|Drosophila melanogaster CG4445-PA
           protein.
          Length = 667

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 160 FSQLMLIAILWNFHLFYAYFIFYVS*ILY*ILTINRIDQKSKH 32
           F QL  + +L+ F LF+A+F+F +S  LY + +I   D + +H
Sbjct: 5   FQQLKKLWLLYLFLLFFAFFMFAISINLY-VASIQGGDAEMRH 46


>AY071071-1|AAL48693.1|   68|Drosophila melanogaster RE14453p
           protein.
          Length = 68

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 126 IFIYFMLILYFMCLKSYIK 70
           I+I+FM  LY +CL  Y+K
Sbjct: 8   IYIFFMFFLYILCLSLYVK 26


>BT011014-1|AAR30174.1|  139|Drosophila melanogaster RH62559p
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 508 FRYQNQPYNTQQTLIATPYFDRLSTSNLYH*CKQNL--RYSVR 386
           F Y   P     +L + PYFD LST   +   K NL   YSVR
Sbjct: 45  FNYSPSPLAQPDSLRSKPYFDFLSTLYAHDTAKSNLFRPYSVR 87


>AE013599-2308|AAF57982.2|  139|Drosophila melanogaster CG8317-PA
           protein.
          Length = 139

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = -2

Query: 508 FRYQNQPYNTQQTLIATPYFDRLSTSNLYH*CKQNL--RYSVR 386
           F Y   P     +L + PYFD LST   +   K NL   YSVR
Sbjct: 45  FNYSPSPLAQPDSLRSKPYFDFLSTLYAHDTAKSNLFRPYSVR 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,739,030
Number of Sequences: 53049
Number of extensions: 447043
Number of successful extensions: 838
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)