Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1053
(467 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15; ... 66 4e-10
UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative; ... 64 1e-09
UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative; ... 61 1e-08
UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma j... 54 1e-06
UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;... 52 5e-06
UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1; ... 51 1e-05
UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14; ... 46 3e-04
UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1; A... 44 0.001
UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putati... 38 0.14
UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;... 36 0.33
UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, wh... 36 0.44
UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putati... 35 1.0
UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11... 35 1.0
UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa... 34 1.3
UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3; Eimer... 34 1.3
UniRef50_Q2JJD7 Cluster: Hydrolase, alpha/beta fold family; n=2;... 33 2.4
UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4; E... 33 2.4
UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic... 33 3.1
UniRef50_Q2JI01 Cluster: Amino acid transporter, periplasmic ami... 33 3.1
UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putati... 33 3.1
UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal ... 33 4.1
UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2; Tric... 33 4.1
UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4; L... 33 4.1
UniRef50_A0VNZ7 Cluster: Glycosyl transferase, group 1; n=1; Din... 31 9.5
UniRef50_P55669 Cluster: Probable peptide ABC transporter peripl... 31 9.5
>UniRef50_P08570 Cluster: 60S acidic ribosomal protein P1; n=15;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Drosophila melanogaster (Fruit fly)
Length = 112
Score = 66.1 bits (154), Expect = 4e-10
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +3
Query: 63 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
M +KAELACVY++LILVDDDVAVTGEKI+TILKAA V+V
Sbjct: 1 MSTKAELACVYASLILVDDDVAVTGEKINTILKAANVEV 39
Score = 64.9 bits (151), Expect = 8e-10
Identities = 38/72 (52%), Positives = 39/72 (54%), Gaps = 15/72 (20%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSGVG---------------XXXXXXXXXXXXXXXXX 318
PYWPGLFAKALEGINV+DLITNIGSGVG
Sbjct: 41 PYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAAESKKEEKKKEEESD 100
Query: 319 XSDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112
>UniRef50_Q16FG5 Cluster: Acidic ribosomal protein P1, putative;
n=2; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 106
Score = 64.1 bits (149), Expect = 1e-09
Identities = 33/57 (57%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSGVGXXXXXXXXXXXXXXXXXXS-DDDMGFGLF 351
PYWPGLF KALEGINV+DLITNIGSGV DDDMGF LF
Sbjct: 49 PYWPGLFTKALEGINVKDLITNIGSGVETGGGAAPTAFEKKEEEPVEFDDDMGFRLF 105
Score = 43.6 bits (98), Expect = 0.002
Identities = 23/32 (71%), Positives = 25/32 (78%)
Frame = +3
Query: 84 ACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
+C YSALIL DDDVAVT EKISTI A VD+
Sbjct: 18 SCAYSALILFDDDVAVTDEKISTI--QANVDI 47
>UniRef50_Q17FT7 Cluster: Acidic ribosomal protein P1, putative;
n=1; Aedes aegypti|Rep: Acidic ribosomal protein P1,
putative - Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 60.9 bits (141), Expect = 1e-08
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSGVG 267
PYWP LFAKALEGINV+DLITNIGSGVG
Sbjct: 12 PYWPALFAKALEGINVKDLITNIGSGVG 39
>UniRef50_Q5DBA6 Cluster: SJCHGC09468 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09468 protein - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3
Query: 66 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV 173
+SK+ELACVY+AL+L DDD+ VT +KI+TILKAA +
Sbjct: 1 MSKSELACVYAALMLADDDIDVTADKINTILKAANI 36
Score = 31.5 bits (68), Expect = 9.5
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 187 YWPGLFAKALEGINVRDLITNIGS 258
Y P LFA +L G NV+DL+ ++GS
Sbjct: 42 YLPNLFATSLNGKNVKDLLMSMGS 65
>UniRef50_P05386 Cluster: 60S acidic ribosomal protein P1; n=156;
Eukaryota|Rep: 60S acidic ribosomal protein P1 - Homo
sapiens (Human)
Length = 114
Score = 52.4 bits (120), Expect = 5e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 63 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+V
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNV 39
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 17/74 (22%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSG-----------------VGXXXXXXXXXXXXXXX 312
P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 41 PFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEE 100
Query: 313 XXXSDDDMGFGLFD 354
SDDDMGFGLFD
Sbjct: 101 SEESDDDMGFGLFD 114
>UniRef50_Q16VR0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 88
Score = 50.8 bits (116), Expect = 1e-05
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGS 258
PYW LFAKALEGINV+DLITNIGS
Sbjct: 64 PYWRALFAKALEGINVKDLITNIGS 88
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +3
Query: 90 VYSALILVDDDVAVTGEKISTILKAAAVD 176
VYSALILVDD VAVT EKISTILKAA V+
Sbjct: 36 VYSALILVDD-VAVTDEKISTILKAANVE 63
>UniRef50_P50344 Cluster: 60S acidic ribosomal protein P1; n=14;
Dikarya|Rep: 60S acidic ribosomal protein P1 -
Cladosporium herbarum (Davidiella tassiana)
Length = 110
Score = 46.4 bits (105), Expect = 3e-04
Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSGVG-------------XXXXXXXXXXXXXXXXXXS 324
P W LFAKALEG +V+DL+ N+GSG G S
Sbjct: 41 PIWTSLFAKALEGKDVKDLLLNVGSGGGAAPAAGGAAAGGAAAVLDAPAEEKAEEEKEES 100
Query: 325 DDDMGFGLFD 354
DDDMGFGLFD
Sbjct: 101 DDDMGFGLFD 110
Score = 36.7 bits (81), Expect = 0.25
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 66 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAV 173
+S AELA Y+ALIL D+ + +T +K+ ++ AA V
Sbjct: 1 MSAAELASSYAALILADEGLEITADKLQALISAAKV 36
>UniRef50_Q9FLV1 Cluster: 60s acidic ribosomal protein P1; n=1;
Arabidopsis thaliana|Rep: 60s acidic ribosomal protein
P1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 111
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +3
Query: 66 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
+S +ELAC Y+ALIL DD + +T E IS ++K A V+V
Sbjct: 1 MSTSELACTYAALILHDDGIEITAENISKLVKTANVNV 38
Score = 37.9 bits (84), Expect = 0.11
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 187 YWPGLFAKALEGINVRDLITNIGSG 261
YWP LFAK E N+ DLI N+G+G
Sbjct: 41 YWPSLFAKLCEKKNIDDLIMNVGAG 65
>UniRef50_Q0UPB2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 114
Score = 37.9 bits (84), Expect = 0.11
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGSGVG 267
P W LFAKALEG +V+D++T + S G
Sbjct: 42 PIWTTLFAKALEGKDVKDILTEVASAAG 69
Score = 33.5 bits (73), Expect = 2.4
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 63 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVD 176
M + E A Y+ALIL DD +T EK+ +L AA ++
Sbjct: 1 MPTDPERAVSYAALILADDATPITPEKLQVLLIAAGIE 38
>UniRef50_Q4N3J3 Cluster: 60S acidic ribosomal protein P1, putative;
n=2; Theileria|Rep: 60S acidic ribosomal protein P1,
putative - Theileria parva
Length = 117
Score = 37.5 bits (83), Expect = 0.14
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 72 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
+ EL CVYS+L+L DD + VT + I ++KAA D+
Sbjct: 14 REELMCVYSSLVLYDDGLDVTQDNILKLVKAAKGDM 49
>UniRef50_UPI0000F2B32D Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 103
Score = 36.3 bits (80), Expect = 0.33
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDV----LAILARSVRQSLGRHQCP*PD 242
+ C+YSA IL +D V V +KI+T +KAA ++V + A+S+ LG C PD
Sbjct: 19 KFTCIYSAHILHNDKVMVMEDKINTPIKAAGINVEPFWPGLFAKSLNNVLG---CAAPD 74
>UniRef50_A0DBJ7 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 122
Score = 35.9 bits (79), Expect = 0.44
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 75 AELACVYSALILVDDDVAVTGEKISTILKAAAVDVLAILARSVRQSL 215
+E AC Y+ALIL +D+ + K++ I+KAA + V I + ++L
Sbjct: 17 SEAACTYAALILYEDNQEINAAKLAQIIKAANLRVEPIWTKVFEKAL 63
>UniRef50_A2DFD3 Cluster: 60S acidic ribosomal protein P1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P1, putative - Trichomonas vaginalis G3
Length = 44
Score = 34.7 bits (76), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAV 173
ELACVY+ALIL D D +T + + I+ A+ +
Sbjct: 4 ELACVYAALILHDGDKEITADALQKIIDASGL 35
>UniRef50_Q9HFQ7 Cluster: 60S acidic ribosomal protein P1-A; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P1-A -
Candida albicans (Yeast)
Length = 106
Score = 34.7 bits (76), Expect = 1.0
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Frame = +1
Query: 190 WPGLFAKALEGINVRDLITNIGS-----------GVGXXXXXXXXXXXXXXXXXXSDDDM 336
W LFAKALEG ++++ N + G G SDDDM
Sbjct: 41 WADLFAKALEGKDLKEFFFNFSAAPAAAAAGGAAGGGAAAEEAAEEEKEEEAKEESDDDM 100
Query: 337 GFGLFD 354
GFGLFD
Sbjct: 101 GFGLFD 106
Score = 32.7 bits (71), Expect = 4.1
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDVLAILA 194
E A Y+ALIL D +V +T EK+ ++ A V+V I A
Sbjct: 4 ESALSYAALILADAEVEITSEKLLALVTKANVEVEGIWA 42
>UniRef50_Q7R992 Cluster: Acidic ribosomal protein P1-hydromedusa;
n=5; Plasmodium|Rep: Acidic ribosomal protein
P1-hydromedusa - Plasmodium yoelii yoelii
Length = 119
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +3
Query: 72 KAELACVYSALILVDDDVAVTGEKISTILKAAAVDVLAILARSVRQSL 215
K EL C Y+ALIL ++ +++T E I ++K + VL L ++L
Sbjct: 14 KQELLCTYAALILHEEKMSITNENIVKLIKKSNNTVLPYLPMLFEKAL 61
>UniRef50_Q5CJB8 Cluster: Acidic ribosomal protein P1; n=3;
Eimeriorina|Rep: Acidic ribosomal protein P1 -
Cryptosporidium hominis
Length = 124
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +3
Query: 78 ELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
EL C Y+AL+L D V VT E I I+ AA V
Sbjct: 16 ELICSYAALVLSDGGVPVTSENIKKIISAAGGSV 49
Score = 33.9 bits (74), Expect = 1.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 184 PYWPGLFAKALEGINVRDLITNIGS 258
PY+PGLFA+AL NV D++ G+
Sbjct: 51 PYFPGLFAQALSTTNVSDIVAGCGA 75
>UniRef50_Q2JJD7 Cluster: Hydrolase, alpha/beta fold family; n=2;
Synechococcus|Rep: Hydrolase, alpha/beta fold family -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 274
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 204 EQTWPIWLVHLQPPLSRWWKFSHQLRQ 124
E W WL+ PL+RWW + QL Q
Sbjct: 142 ESAWVDWLLRAITPLARWWHWEDQLAQ 168
>UniRef50_P26643 Cluster: 60S acidic ribosomal protein P1; n=4;
Eukaryota|Rep: 60S acidic ribosomal protein P1 -
Trypanosoma cruzi
Length = 109
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 63 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
M SK +LAC Y+ALIL D + + + KAA VDV
Sbjct: 1 MSSKQQLACTYAALILADSG-KTDMDSLLKVTKAAGVDV 38
>UniRef50_UPI0000608022 Cluster: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S acidic
ribosomal protein P1 isoform 4 - Mus musculus
Length = 88
Score = 33.1 bits (72), Expect = 3.1
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +3
Query: 63 MVSKAELACVYSALILVDDD 122
M S +ELAC+YSALIL +DD
Sbjct: 1 MASASELACIYSALILHEDD 20
>UniRef50_Q2JI01 Cluster: Amino acid transporter, periplasmic amino
acid-binding protein; n=2; Synechococcus|Rep: Amino acid
transporter, periplasmic amino acid-binding protein -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 309
Score = 33.1 bits (72), Expect = 3.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 195 WPIWLVHLQPPLSRWWK 145
WP WL +Q PL RWW+
Sbjct: 15 WPAWLSWIQRPLPRWWR 31
>UniRef50_Q9N6F4 Cluster: 60S acidic ribosomal protein P2, putative;
n=7; Trypanosomatidae|Rep: 60S acidic ribosomal protein
P2, putative - Leishmania major
Length = 111
Score = 33.1 bits (72), Expect = 3.1
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 66 VSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
+S LAC Y+AL+L D + + E I+ +KAA V++
Sbjct: 1 MSAETLACTYAALMLSDAGLPTSAENIAAAVKAAGVEM 38
>UniRef50_UPI000155E878 Cluster: PREDICTED: similar to ribosomal
protein P1; n=3; Eutheria|Rep: PREDICTED: similar to
ribosomal protein P1 - Equus caballus
Length = 125
Score = 32.7 bits (71), Expect = 4.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 81 LACVYSALILVDDDVAVT 134
LAC+YSALIL DD+V VT
Sbjct: 43 LACIYSALILHDDEVTVT 60
>UniRef50_A2G448 Cluster: 60s Acidic ribosomal protein; n=2;
Trichomonas vaginalis G3|Rep: 60s Acidic ribosomal
protein - Trichomonas vaginalis G3
Length = 104
Score = 32.7 bits (71), Expect = 4.1
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 75 AELACVYSALILVDDDVAVTGEKISTILKAAAV 173
AELACVY+ALIL D + + + ++ ++ A+ +
Sbjct: 3 AELACVYAALILNDGEKEINADSLAKVVAASGL 35
>UniRef50_O46313 Cluster: 60S acidic ribosomal protein P1; n=4;
Leishmania|Rep: 60S acidic ribosomal protein P1 -
Leishmania peruviana
Length = 107
Score = 32.7 bits (71), Expect = 4.1
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 81 LACVYSALILVDDDVAVTGEKISTILKAAAVDV 179
LAC Y+AL+L D + + E I+ +KAA V V
Sbjct: 6 LACTYAALMLSDAGLPTSAENIAAAVKAAGVSV 38
>UniRef50_A0VNZ7 Cluster: Glycosyl transferase, group 1; n=1;
Dinoroseobacter shibae DFL 12|Rep: Glycosyl transferase,
group 1 - Dinoroseobacter shibae DFL 12
Length = 412
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 148 EIFSPVTATSSSTRMRAE*THANSAFDTIFSFERASCRRX*LKREQAR 5
++ +P +A R+RA THA+ ++ ++A CR L E AR
Sbjct: 173 DLVTPASAARFDKRLRAMRTHADRIITATWAVQQAGCRHLGLGSEDAR 220
>UniRef50_P55669 Cluster: Probable peptide ABC transporter
periplasmic-binding protein y4tO precursor; n=2;
Rhizobiales|Rep: Probable peptide ABC transporter
periplasmic-binding protein y4tO precursor - Rhizobium
sp. (strain NGR234)
Length = 531
Score = 31.5 bits (68), Expect = 9.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -2
Query: 220 LPRLWRTDLANMASTSTAAAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFSFERAS 41
+P L R A A + A + + +F PV T+ ++ THA + +DT+FS + S
Sbjct: 21 VPSLLRAQTAVAADKTVRMALENLSVFDPVATTAGISQ-----THALAIYDTLFSADSQS 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,467,561
Number of Sequences: 1657284
Number of extensions: 6655478
Number of successful extensions: 15210
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15202
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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