Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1049
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.79 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.7  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 24.6 bits (51), Expect = 0.79
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 526 FVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLP 645
           + LLP L+     +ET     +VR + ++SLR + +QH P
Sbjct: 89  YCLLPPLESLATVEET-----VVRDKAVESLRAVAQQHSP 123


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 81  LEKILNNNTNRXNSLCGWKI 140
           L +ILN   N  NS  GW I
Sbjct: 203 LAQILNQTVNFYNSAFGWPI 222


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
 Frame = -1

Query: 526 ILPFHFYCHVQFY--LAHFYL 470
           I P HFYC    Y   + FYL
Sbjct: 307 IFPTHFYCAFSLYPLKSTFYL 327


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -3

Query: 215 PSSLRSFSLKAFFSNRISATPLLSLNFPTT 126
           P+S+ SF+L+   S   S+ P+LS    TT
Sbjct: 221 PASIDSFTLEQHRSWCSSSQPVLSTTNSTT 250


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 499 VQFYLAHFYLLECCTPTVN*TVLSRDE 419
           V   +A   +L  CTPTV   V SR E
Sbjct: 108 VNLSVADLMVLLVCTPTVLVEVNSRPE 134


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 499 VQFYLAHFYLLECCTPTVN*TVLSRDE 419
           V   +A   +L  CTPTV   V SR E
Sbjct: 108 VNLSVADLMVLLVCTPTVLVEVNSRPE 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,374
Number of Sequences: 336
Number of extensions: 3528
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)