Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1049
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p pro...   207   1e-53
AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA ...   207   1e-53
AE014297-1634|AAF54907.1|  329|Drosophila melanogaster CG10148-P...    31   1.5  

>BT001389-1|AAN71144.1|  374|Drosophila melanogaster GH04919p
           protein.
          Length = 374

 Score =  207 bits (505), Expect = 1e-53
 Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 10/200 (5%)
 Frame = +1

Query: 115 KTACVVGKFKDK-SGVALILFEKNAFKENDL----SEEG-----YFSKETQLKTFFENDI 264
           K+  ++G F D  +  A+++FEKNA++E+D+    SEE      YF+ + ++ T F N+I
Sbjct: 33  KSISLLGTFPDLGTDDAIVVFEKNAYRESDVATASSEESPKKPSYFTADLKVDTEFINNI 92

Query: 265 YGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFN 444
           YG+F+  P   +  VK+T+IYPAT+KHI K+S  + +++ ETP+LY+++TLP+L   QF+
Sbjct: 93  YGSFQVVPTQDLCSVKSTVIYPATEKHIEKYSVSQKYLIRETPDLYQRITLPYLTSSQFS 152

Query: 445 LQWVYNILEGKSEQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRD 624
           L+WVYNILE K E +RIV++++  K GF+LLPDLKWDG   ETLYLL IV +RDIKSLRD
Sbjct: 153 LEWVYNILEHKQETERIVYEDRDPKTGFILLPDLKWDGRNVETLYLLGIVHKRDIKSLRD 212

Query: 625 LDEQHLPLLKRIRDEGKKTI 684
           L+E HL LL+ +R   K  I
Sbjct: 213 LNESHLDLLRNVRQASKDAI 232


>AE014297-342|AAF51960.1|  374|Drosophila melanogaster CG2091-PA
           protein.
          Length = 374

 Score =  207 bits (505), Expect = 1e-53
 Identities = 99/200 (49%), Positives = 143/200 (71%), Gaps = 10/200 (5%)
 Frame = +1

Query: 115 KTACVVGKFKDK-SGVALILFEKNAFKENDL----SEEG-----YFSKETQLKTFFENDI 264
           K+  ++G F D  +  A+++FEKNA++E+D+    SEE      YF+ + ++ T F N+I
Sbjct: 33  KSISLLGTFPDLGTDDAIVVFEKNAYRESDVATASSEESPKKPSYFTADLKVDTEFINNI 92

Query: 265 YGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFN 444
           YG+F+  P   +  VK+T+IYPAT+KHI K+S  + +++ ETP+LY+++TLP+L   QF+
Sbjct: 93  YGSFQVVPTQDLCSVKSTVIYPATEKHIEKYSVSQKYLIRETPDLYQRITLPYLTSSQFS 152

Query: 445 LQWVYNILEGKSEQDRIVHDNKSEKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRD 624
           L+WVYNILE K E +RIV++++  K GF+LLPDLKWDG   ETLYLL IV +RDIKSLRD
Sbjct: 153 LEWVYNILEHKQETERIVYEDRDPKTGFILLPDLKWDGRNVETLYLLGIVHKRDIKSLRD 212

Query: 625 LDEQHLPLLKRIRDEGKKTI 684
           L+E HL LL+ +R   K  I
Sbjct: 213 LNESHLDLLRNVRQASKDAI 232


>AE014297-1634|AAF54907.1|  329|Drosophila melanogaster CG10148-PA
           protein.
          Length = 329

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
 Frame = +1

Query: 289 PSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFNLQWVYNIL 468
           P ++     ++ +   D    KFSQ       +     K L L H E    + +  YN+L
Sbjct: 158 PLSLADTNMSLPFVTLDLSCNKFSQISTSFFAQRLPQLKNLNLAHNELLNISRESFYNLL 217

Query: 469 EGKSEQDRIVHDNKS--EKEGFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHL 642
           E ++    + H+N S  + E F+ LP+L++  L+   L   AI   + I  L  L   + 
Sbjct: 218 ELQTLV--LSHNNISDIDYETFLALPNLQYLDLSHNRLSGSAIRALQGIPDLVSLSIAYN 275

Query: 643 P 645
           P
Sbjct: 276 P 276


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,852,641
Number of Sequences: 53049
Number of extensions: 586669
Number of successful extensions: 1572
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)