Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1049
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-li... 149 2e-36
AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical ... 149 2e-36
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 27 9.8
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 27 9.8
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 27 9.8
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 27 9.8
>AY079166-1|AAL86013.1| 311|Caenorhabditis elegans heat shock-like
protein protein.
Length = 311
Score = 149 bits (361), Expect = 2e-36
Identities = 73/174 (41%), Positives = 108/174 (62%)
Frame = +1
Query: 163 LILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDK 342
++L K+ F E E + QL+ NDI+G++ +N +K+ +IYP D+
Sbjct: 54 ILLANKSPFSEEKSDIEKLLAT-AQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDR 112
Query: 343 HIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFNLQWVYNILEGKSEQDRIVHDNKSEKE 522
IAK+ Q+E ++ ETPELY+ +T P++EK Q NL WVYN LE +SE D+IV ++ +
Sbjct: 113 LIAKYRQEEKFVIRETPELYETVTRPYIEKYQLNLNWVYNCLEKRSEVDKIVFEDPDNEN 172
Query: 523 GFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLPLLKRIRDEGKKTI 684
GFVLL D+KWDG T E LY+LAI + +KS+RDL L +L +RD+ + I
Sbjct: 173 GFVLLQDIKWDGKTLENLYVLAICHRHGLKSVRDLTGDDLEMLYNMRDKSLEAI 226
>AL132858-5|CAB60481.1| 311|Caenorhabditis elegans Hypothetical
protein Y113G7A.9 protein.
Length = 311
Score = 149 bits (361), Expect = 2e-36
Identities = 73/174 (41%), Positives = 108/174 (62%)
Frame = +1
Query: 163 LILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDK 342
++L K+ F E E + QL+ NDI+G++ +N +K+ +IYP D+
Sbjct: 54 ILLANKSPFSEEKSDIEKLLAT-AQLQEISRNDIFGSYNIEIDPKLNLLKSQLIYPINDR 112
Query: 343 HIAKFSQQEVHIVLETPELYKKLTLPHLEKEQFNLQWVYNILEGKSEQDRIVHDNKSEKE 522
IAK+ Q+E ++ ETPELY+ +T P++EK Q NL WVYN LE +SE D+IV ++ +
Sbjct: 113 LIAKYRQEEKFVIRETPELYETVTRPYIEKYQLNLNWVYNCLEKRSEVDKIVFEDPDNEN 172
Query: 523 GFVLLPDLKWDGLTKETLYLLAIVRQRDIKSLRDLDEQHLPLLKRIRDEGKKTI 684
GFVLL D+KWDG T E LY+LAI + +KS+RDL L +L +RD+ + I
Sbjct: 173 GFVLLQDIKWDGKTLENLYVLAICHRHGLKSVRDLTGDDLEMLYNMRDKSLEAI 226
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 157 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 330
VA +L + DLS++GY S E+ N + N E P +N I
Sbjct: 298 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 357
Query: 331 ATDKHIAKFSQQEVHIVLETPELYKK 408
+ + + SQ +H + PE ++
Sbjct: 358 ISQNRVHQPSQGPLHQEADAPEANRR 383
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/86 (24%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +1
Query: 157 VALILFEKNAFKENDLSEEGYFSKETQLKTFFENDIYGNFECFPP--STINGVKTTIIYP 330
VA +L + DLS++GY S E+ N + N E P +N I
Sbjct: 289 VAKVLPDHEGSSSQDLSDDGYSSPESSSMQLGRNSMTSNEETSHPVQQEMNKTDMVIADV 348
Query: 331 ATDKHIAKFSQQEVHIVLETPELYKK 408
+ + + SQ +H + PE ++
Sbjct: 349 ISQNRVHQPSQGPLHQEADAPEANRR 374
>U58758-1|AAB93429.2| 819|Caenorhabditis elegans Hypothetical
protein ZK1127.7 protein.
Length = 819
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = +1
Query: 166 ILFEKNAFKENDLSEEGYFSKETQ---LKTFFENDIYGNFECFP-PSTINGVK 312
++ +KN K+ L+EE ++KET+ LK FF +I ++ P ++G+K
Sbjct: 279 LMQDKNQRKQQGLAEECLYNKETRFVTLKDFFNYEIVCSWNLHSIPCLVDGLK 331
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 211 EGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLET 390
E Y + +L+ + I G+F FP T TT + TD EV +V E
Sbjct: 643 ESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDAWMQTDVEEQLMVSPEVSLVSEA 702
Query: 391 P-ELYKKLTLPHLEKE 435
P L HL+++
Sbjct: 703 PSSLQDSRRSSHLDEK 718
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 211 EGYFSKETQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLET 390
E Y + +L+ + I G+F FP T TT + TD EV +V E
Sbjct: 643 ESYKQRLLELEPYPGKIISGSFRDFPSQTDPSPATTDAWMQTDVEEQLMVSPEVSLVSEA 702
Query: 391 P-ELYKKLTLPHLEKE 435
P L HL+++
Sbjct: 703 PSSLQDSRRSSHLDEK 718
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 232 TQLKTFFENDIYGNFECFPPSTINGVKTTIIYPATDKHIAKFSQQEVHIVLETPELYKKL 411
T++K E +Y + FP TI+ DKHIA F+ ++L + E +
Sbjct: 289 TKIKKIKEGSVYSSIPIFPGGTIS-----------DKHIAAFTDGAAAVILASQEAVSEQ 337
Query: 412 TLPHLEK 432
L L +
Sbjct: 338 NLKPLAR 344
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 194 SLKAFFSNRISATPLLSLNFPTTQAVXPVSVI 99
SL S ++ TPL+ +NFP + A+ +S I
Sbjct: 731 SLGRELSTPLATTPLIPMNFPLSSALPVISAI 762
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,493
Number of Sequences: 27780
Number of extensions: 330490
Number of successful extensions: 832
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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