Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1047
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.0  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   6.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 289 DTANVESTLIYYKVNDKGSVLKWARVIDEF 378
           D+ +VE  + Y +  + G V  WA  +D+F
Sbjct: 491 DSESVEKKVNYVQEMNLGGVFIWATDLDDF 520


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -3

Query: 460 RCWESMVRGFRHHELHHCRCLSYGID 383
           RCWE  + G  + + ++  CL  G D
Sbjct: 533 RCWEVFMDGICNEDCNNPECLFDGRD 558


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 432 FGTMSFTTAAAFLTVLIQKFVN 367
           +GT +++    F+TV++  F+N
Sbjct: 170 YGTKTYSLFIVFMTVILPYFIN 191


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 432 FGTMSFTTAAAFLTVLIQKFVN 367
           +GT +++    F+TV++  F+N
Sbjct: 170 YGTKTYSLFIVFMTVILPYFIN 191


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = -1

Query: 426 TMSFTTAAAFLTVLIQKFVNNPGPFEHRSLIVDLVIDQSTFHVGSIWHWPEAQTW 262
           T S+ +   F     Q   +N     H++ ++  V   +T H+GS++     ++W
Sbjct: 111 TASYGSDLYFPGATSQPPTDNSHVHHHQTSLLGKVEGAATHHLGSVYSRHPYESW 165


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 427 AENRVPCSPSSGPLGEKQVCDVPVDDFNPCTPANQY 534
           A N+   + + G LG   + D+ +DDF      N+Y
Sbjct: 387 AGNKASYARAKG-LGGIAIVDITLDDFRGLCTGNKY 421


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 595 PQPYNNTEDLP 627
           PQPY N +D P
Sbjct: 18  PQPYMNAQDAP 28


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 177 EEAHQNRVEDKVK*QDLC 124
           EE  + R EDK K + LC
Sbjct: 544 EEEKKKREEDKAKFEGLC 561


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,474
Number of Sequences: 336
Number of extensions: 4147
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)