Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1047
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 115 4e-26
Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical pr... 112 2e-25
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 29 3.5
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 29 3.5
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 29 3.5
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.5
L16621-5|AAA28230.1| 214|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 115 bits (276), Expect = 4e-26
Identities = 68/230 (29%), Positives = 117/230 (50%)
Frame = +1
Query: 55 EAFRIFLYNSETGQVLGRTGSSWAKXXXXXXXXXXXXVGFFAALLAVFYQTLDTKVPKWQ 234
E F FLYN + G VLGRTG+SW + FF L++F +TLD KVP++
Sbjct: 24 ETFAQFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSAFFIGCLSIFLRTLDPKVPRFY 83
Query: 235 LDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDKGSVLKWARVIDEFLNQYRKKGSGSG 414
+IIG NPG+G++P N +STLI + + D S + + +D +L++Y K + +
Sbjct: 84 GKGTIIGVNPGVGYQPWL-KENPDSTLIKFNLQDSKSWEPYVKQLDNYLSKY-KNTNETR 141
Query: 415 EAHGAENRVPCSPSSGPLGEKQVCDVPVDDFNPCTPANQYNYEQAGPCVFLKLNKIYNWR 594
+ ++N + + D+ + + C +QY Y+ PCV + LN++ WR
Sbjct: 142 DCGASDNNDALETDTDTFPCR--FDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGWR 199
Query: 595 PQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCEGXNPADVXNIG 744
P Y++ ++PE++K G+ ++ ++CEG D ++G
Sbjct: 200 PVNYDD-----GSVPEEIK-------GRYKPGSITINCEGATSFDKEHLG 237
>Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical
protein C17E4.9 protein.
Length = 320
Score = 112 bits (270), Expect = 2e-25
Identities = 67/230 (29%), Positives = 109/230 (47%)
Frame = +1
Query: 55 EAFRIFLYNSETGQVLGRTGSSWAKXXXXXXXXXXXXVGFFAALLAVFYQTLDTKVPKWQ 234
E FR FLYN + G V+GRTG SW + F+ L +F +TLD KVP++
Sbjct: 27 ETFREFLYNKKNGTVMGRTGKSWFQIIVFYIIFYAFLAAFWLTCLTIFMKTLDPKVPRFY 86
Query: 235 LDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDKGSVLKWARVIDEFLNQYRKKGSGSG 414
+IIG NPG+G++P +STLI Y + D+ S + + +L +Y + +
Sbjct: 87 GKGTIIGVNPGVGYQPWL-KERPDSTLIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETR 145
Query: 415 EAHGAENRVPCSPSSGPLGEKQVCDVPVDDFNPCTPANQYNYEQAGPCVFLKLNKIYNWR 594
E ++ + L + D+ V D C+ + + Y+ PCV + LN++ WR
Sbjct: 146 ECGAGDSNDDLEKNPDALPCR--FDLSVFD-KGCSEKSDFGYKSGKPCVIISLNRLIGWR 202
Query: 595 PQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCEGXNPADVXNIG 744
P Y ++PE++K K A ++ ++C G D +IG
Sbjct: 203 PTDYQE-----NSVPEEVKDRYK-------AGSIAINCRGATNVDQEHIG 240
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 41.1 bits (92), Expect = 8e-04
Identities = 39/160 (24%), Positives = 64/160 (40%), Gaps = 10/160 (6%)
Frame = +1
Query: 181 ALLAVFYQTLDTKVPKWQLDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDKGSVLKWA 360
AL+ + LD + P + D S +G P + F P P + T K ++ +++
Sbjct: 123 ALVWFNFSRLDRQYPIYFGDGSFLGGAPKVSFDPNPRQFLEDGT----KNAMSWNIYEFS 178
Query: 361 RVIDEFLN--QYRKKGSGSGEAHGAENRVPCSPSSGPLGEKQVCDVP-VDDFNPCTPA-- 525
++ + Q KK SG + C + + + C + DF CT +
Sbjct: 179 TYVNYLIRYKQVLKKYSGGIGKQKVKKEEMCKNQT--MTRENACKFDRLTDFGECTLSLD 236
Query: 526 ---NQYNYEQAGPCVFLKLNKIYNWRP--QPYNNTEDLPT 630
+ Y + PC+ LKLNKI W P P N P+
Sbjct: 237 NLERGFGYSKGQPCIMLKLNKIVGWVPNLSPSKNKTKCPS 276
>U41553-5|AAO91694.1| 468|Caenorhabditis elegans Hypothetical
protein ZK1193.5a protein.
Length = 468
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = +1
Query: 571 LNKIYNWRPQPYN----NTEDLPTNMPEDLKQHI--KTLSGKPDANTVWVSC 708
L ++ NW+P P++ N +D N+ +D+ H+ K LS KP ++ V C
Sbjct: 62 LIQVNNWKPLPFDQITENLDDTVENLFKDISSHVVLKILS-KPSTDSNSVQC 112
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical
protein F32H2.5 protein.
Length = 2586
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 324 VIDQSTFHVGSIWHWPEAQTWITAD 250
V+ + T +G +W W Q W+T D
Sbjct: 840 VVPKGTPMIGPMWKWDHTQDWLTID 864
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +1
Query: 319 YYKVNDKGSVLKWARVIDEFLNQYRKKGSGSGEAHGAENRV----PCSPSSGPLGEKQVC 486
+ + + G L + R+I E L++Y + AHG N + P PSS P G +
Sbjct: 49 FNRKTESGDYLTFPRIIQELLSRYSVRKLTVTMAHGRWNLIGWGLPPQPSS-PTGAQVFA 107
Query: 487 DVPVDDFNPCTPANQYNYEQAGPCVFLK 570
+ D ++ E +FLK
Sbjct: 108 EFEADQQEDADERMKFLVEALNGVLFLK 135
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 583 YNWRPQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCE 711
YN P Y P P+D +Q +K LSG + +WV E
Sbjct: 123 YNGGPGAYG--AQAPGPNPQDQEQRLKRLSGCEEGQELWVETE 163
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 583 YNWRPQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCE 711
YN P Y P P+D +Q +K LSG + +WV E
Sbjct: 132 YNGGPGAYG--AQAPGPNPQDQEQRLKRLSGCEEGQELWVETE 172
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 583 YNWRPQPYNNTEDLPTNMPEDLKQHIKTLSGKPDANTVWVSCE 711
YN P Y P P+D +Q +K LSG + +WV E
Sbjct: 123 YNGGPGAYG--AQAPGPNPQDQEQRLKRLSGCEEGQELWVETE 163
>L16621-5|AAA28230.1| 214|Caenorhabditis elegans Hypothetical
protein ZK688.3 protein.
Length = 214
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 229 WQLDSSIIGSNPGLGFRPMPDTANVESTLIYYKVNDK 339
W L S GS P GF P+ D N ++ K+N K
Sbjct: 113 WFLAKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGK 149
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 33 PPXPREMGGVQDLPVQLGDGPGPRAHRLKLGKDPAILP 146
P P GG Q Q G PGP H++ PA P
Sbjct: 384 PQQPAGAGGAQPGAAQAGGQPGPFPHQIFYAPAPANRP 421
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,666,865
Number of Sequences: 27780
Number of extensions: 398270
Number of successful extensions: 1119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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