Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1045
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4QHP5 Cluster: Putative uncharacterized protein; n=3; ...    36   0.84 
UniRef50_O77328 Cluster: Serine/threonine protein kinase, putati...    36   1.1  
UniRef50_UPI0000F219D1 Cluster: PREDICTED: hypothetical protein;...    33   4.5  
UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_Q245H6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.5  
UniRef50_A6VL98 Cluster: Tripartite ATP-independent periplasmic ...    33   5.9  
UniRef50_A5B194 Cluster: Putative uncharacterized protein; n=2; ...    33   7.8  

>UniRef50_Q4QHP5 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 218

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -2

Query: 511 SPPGMFKNIKDVNSTNTSDNQLIKLVSRLAEADRETATKFHPVPHN 374
           SPP +F+    V  T  S  ++ KLV+RL + D    +K+H V HN
Sbjct: 89  SPPHIFREQFFVGQTQLSALEVRKLVARLEQCDTWQGSKYHLVKHN 134


>UniRef50_O77328 Cluster: Serine/threonine protein kinase, putative;
            n=3; Plasmodium|Rep: Serine/threonine protein kinase,
            putative - Plasmodium falciparum (isolate 3D7)
          Length = 1650

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 26/105 (24%), Positives = 47/105 (44%)
 Frame = -2

Query: 610  VQRYLNTSLETSLRSLQISPDTKIILRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVS 431
            +++Y N  ++  ++S  I P  K I R+   N +     KN  ++NS N  ++   K + 
Sbjct: 1188 MEKYKNNKMKYKIKSNSIPPIIKKIERK--SNDNDNDNIKNNDNINSNNNINSNNDKCLF 1245

Query: 430  RLAEADRETATKFHPVPHNDWCVVNNSTEDHLTTTSIKNRLSIKN 296
               E DR      + + +N       S      TTS+KN++ I +
Sbjct: 1246 LSKEKDRVHLKNNNIIVNNTMMFRKQSNSCDNNTTSLKNKMIINS 1290


>UniRef50_UPI0000F219D1 Cluster: PREDICTED: hypothetical protein;
           n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 682

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
 Frame = -2

Query: 598 LNTSLETSLRSLQISPDTK---IILRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVSR 428
           +NT L++S  ++++S D K    I  RR+  I  PG +K     + +N S  QLI+ +S 
Sbjct: 103 INTVLQSSETAVKVSTDVKTEGFIDGRRICLIESPGWWKTFNLTDLSNISKQQLIRRISL 162

Query: 427 LA 422
           ++
Sbjct: 163 IS 164


>UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1468

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 18/72 (25%), Positives = 34/72 (47%)
 Frame = -2

Query: 529 RRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVSRLAEADRETATKFHPVPHNDWCVVNNS 350
           +++KN  PP   K++K VN+ NT++N      S +  A      K  P+      ++ NS
Sbjct: 737 QQVKNQEPPKSPKSLKTVNNNNTTNNNTNTTYSSIGNATNNILKKLDPLKKK---IIENS 793

Query: 349 TEDHLTTTSIKN 314
           + ++    +  N
Sbjct: 794 SSNNNNNNNNNN 805


>UniRef50_Q245H6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1610

 Score = 33.5 bits (73), Expect = 4.5
 Identities = 26/85 (30%), Positives = 37/85 (43%)
 Frame = -2

Query: 607 QRYLNTSLETSLRSLQISPDTKIILRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVSR 428
           Q+ +N  L T+L   Q S +    +  R+K I    +F+  + V S   SDNQ  +L   
Sbjct: 55  QKIINDELITTLSESQTSSE---FIEERIKEIIENQLFQEKEQVISKLASDNQAFQLKIE 111

Query: 427 LAEADRETATKFHPVPHNDWCVVNN 353
             E D +T        HN    VNN
Sbjct: 112 QLEIDNQTLASSIQSVHNQ---VNN 133


>UniRef50_A6VL98 Cluster: Tripartite ATP-independent periplasmic
           transporter DctQ component precursor; n=1;
           Actinobacillus succinogenes 130Z|Rep: Tripartite
           ATP-independent periplasmic transporter DctQ component
           precursor - Actinobacillus succinogenes 130Z
          Length = 169

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 486 IFLNIPGGLIFFNLRRKIIFVSGLIWSDRNDVSSEVFKYL 605
           + L +   L+FFN+  +  F SGL+WS+  +VS  VF Y+
Sbjct: 18  VMLAVMIALVFFNVILRFFFNSGLVWSE--EVSRYVFVYV 55


>UniRef50_A5B194 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 1650

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = -2

Query: 535 LRRRLKNISPPGMFKNIKDVNSTNTSDNQLIKLVSRLAEADRETATKFHPVPHNDWCVVN 356
           L+ +L N +  G+ +  + V++TN  D  L+KL          T  + HPVP  D C+  
Sbjct: 771 LQNQLVNKALEGLSRGGRSVHATNKQDQFLMKLRPDFEITWSNTMNR-HPVPSLDACLSE 829

Query: 355 NSTEDHLTTT 326
              E+H   T
Sbjct: 830 LLREEHRIVT 839


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,792,969
Number of Sequences: 1657284
Number of extensions: 11597336
Number of successful extensions: 26642
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26634
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)