Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1044
(800 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine vasopre... 26 0.40
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 2.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 2.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 2.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 2.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 2.1
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 2.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 2.1
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 2.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 2.1
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 23 2.8
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 22 6.5
>EF222295-1|ABN79655.1| 146|Tribolium castaneum arginine
vasopressin-like peptide protein.
Length = 146
Score = 25.8 bits (54), Expect = 0.40
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = -2
Query: 241 SSPCWCGDHAIAFTAATCAEYVCTGDVECIDQTKSLLSL 125
S+PC AF C++ C D C KS + L
Sbjct: 94 SAPCRKNTGRCAFDGICCSQDSCHADKSCASDDKSPIDL 132
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 71 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 109
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 454 ELDRNGRSVSQPASTTDISTPVSGSVSSRESRPIRWSVSTKP 329
+L NG + P ST +STP + + + SVST P
Sbjct: 115 DLSTNG---APPRSTPPLSTPSNSNATKSSGLTSPLSVSTSP 153
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 340 KHSSELVSTHGYSQNQILVW 399
K SEL G S+ QI +W
Sbjct: 185 KRKSELAENLGLSERQIKIW 204
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 384 PDTGVEISVVDAGCETDRPFLSSSVF 461
PD + IS V ETD F S++F
Sbjct: 16 PDESINISDVIEVIETDPDFHESTMF 41
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,283
Number of Sequences: 336
Number of extensions: 3423
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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