Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1044
(800 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 149 3e-36
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 144 5e-35
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 133 1e-31
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 106 2e-23
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 105 3e-23
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 99 3e-21
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 99 4e-21
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 95 6e-20
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 94 8e-20
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 59 3e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 58 7e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 58 7e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 58 7e-09
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 56 3e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 55 6e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 54 8e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 54 8e-08
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 54 1e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 54 1e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 54 1e-07
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 54 1e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 53 3e-07
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 53 3e-07
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 53 3e-07
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 52 3e-07
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 52 6e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 50 1e-06
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 50 1e-06
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 50 2e-06
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 49 4e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 48 7e-06
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 47 1e-05
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 47 2e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 46 4e-05
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 45 5e-05
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 45 5e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 45 7e-05
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 45 7e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 44 9e-05
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 9e-05
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 44 1e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 44 1e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 1e-04
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 44 2e-04
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 43 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 43 2e-04
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 43 3e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 43 3e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 43 3e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 43 3e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 42 4e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 42 4e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 42 4e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 42 5e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 5e-04
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 42 6e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 42 6e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 41 8e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 8e-04
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 41 8e-04
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 41 8e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 41 0.001
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 41 0.001
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 41 0.001
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 41 0.001
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 41 0.001
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 41 0.001
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 40 0.001
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 40 0.001
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 0.001
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 39 0.003
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 39 0.003
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 39 0.003
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 39 0.003
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 39 0.003
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 39 0.004
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 39 0.004
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 39 0.004
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 39 0.004
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 38 0.006
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 38 0.006
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 38 0.006
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 38 0.006
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 38 0.006
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 38 0.008
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 38 0.008
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 38 0.010
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 38 0.010
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 38 0.010
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 38 0.010
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 37 0.014
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 37 0.014
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 37 0.014
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 37 0.018
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 37 0.018
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 37 0.018
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 36 0.024
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.024
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 36 0.031
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.031
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 36 0.031
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 36 0.031
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 36 0.031
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 36 0.031
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 36 0.041
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 36 0.041
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 36 0.041
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 36 0.041
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 36 0.041
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 36 0.041
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.041
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.041
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 36 0.041
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 35 0.055
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 35 0.055
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 35 0.055
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 35 0.055
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 35 0.072
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 35 0.072
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 35 0.072
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 35 0.072
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 34 0.13
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 34 0.13
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 34 0.13
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 34 0.13
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 34 0.13
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 34 0.13
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 34 0.13
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 34 0.13
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 34 0.13
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.13
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 33 0.17
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 33 0.17
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 33 0.17
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 33 0.17
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 33 0.22
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 33 0.22
At5g15690.1 68418.m01835 hypothetical protein very low similarit... 33 0.22
At4g04780.1 68417.m00700 expressed protein very low similarity t... 33 0.22
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 33 0.22
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 33 0.22
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 33 0.22
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 33 0.22
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 32 0.39
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 32 0.39
At4g09170.1 68417.m01518 expressed protein ; expression support... 32 0.39
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 32 0.39
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 32 0.39
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.39
At1g33450.1 68414.m04140 hypothetical protein low similarity to ... 32 0.39
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 32 0.51
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 32 0.51
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.51
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 32 0.51
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 32 0.51
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 32 0.51
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 31 0.67
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 0.67
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 31 0.67
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 31 0.67
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 31 0.67
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 31 0.67
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.89
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 31 0.89
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 31 0.89
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 0.89
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 31 0.89
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 31 0.89
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 31 0.89
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 31 1.2
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 31 1.2
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 31 1.2
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 30 1.6
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 1.6
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 30 1.6
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 2.1
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 2.1
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 30 2.1
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 30 2.1
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 30 2.1
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 30 2.1
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 30 2.1
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 2.7
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 29 2.7
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 29 2.7
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 29 2.7
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 29 2.7
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 29 3.6
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 3.6
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 29 3.6
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 29 4.7
At2g17030.1 68415.m01963 F-box family protein similar to hypothe... 29 4.7
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 29 4.7
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 29 4.7
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 28 6.3
At4g24020.1 68417.m03452 RWP-RK domain-containing protein simila... 28 6.3
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 6.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 28 6.3
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 28 6.3
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 28 6.3
At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transfera... 28 8.3
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 28 8.3
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 28 8.3
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 28 8.3
At2g17036.1 68415.m01966 F-box family protein ; similar to SKP1... 28 8.3
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 28 8.3
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 8.3
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 8.3
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 28 8.3
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 8.3
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 8.3
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 149 bits (360), Expect = 3e-36
Identities = 64/82 (78%), Positives = 69/82 (84%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH+ EVCGLKWS D + LASGGNDN+LFVW+ HST PV YS H AAVKAIAWSPH H
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVH 390
Query: 234 GLLASGGGTADRCIRFWNTLTS 299
GLLASGGGTADRCIRFWNT T+
Sbjct: 391 GLLASGGGTADRCIRFWNTTTN 412
Score = 132 bits (318), Expect = 3e-31
Identities = 57/74 (77%), Positives = 68/74 (91%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVCNLAWSK+ +ELVSTHGYSQNQI+VWKYP+++++A LTGH+YRVLYLA+SPDG+ IV
Sbjct: 422 SQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIV 481
Query: 493 TGAGDETLRFLECF 534
TGAGDETLRF F
Sbjct: 482 TGAGDETLRFWNVF 495
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLAS--GGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+VC L WS + L S G + N++ VW + S + T + H V +A SP ++
Sbjct: 423 QVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVT 482
Query: 246 SGGGTADRCIRFWNTLTSQPMQISSVQLG 332
G D +RFWN S Q + ++G
Sbjct: 483 GAG---DETLRFWNVFPSPKSQNTDSEIG 508
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+S+VC L WS + EL S G + N++ VW S V K + H+ V +A SP +
Sbjct: 335 KSEVCGLKWSYDNRELAS--GGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGL 392
Query: 490 VT---GAGDETLRF 522
+ G D +RF
Sbjct: 393 LASGGGTADRCIRF 406
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTYSAHVAAVKAIAWS 221
+R ++GHR V L W L+SG D + + V + H + V + WS
Sbjct: 287 TRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWS 344
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPM 308
+ + LASGG D + WN ++QP+
Sbjct: 345 -YDNRELASGGN--DNRLFVWNQHSTQPV 370
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
G VC + W+ G LA G + K+ +W +T H V A+AW
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAW 302
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA 200
P + L GH V L SPDGQ++ +G D L W++ + Q + + +
Sbjct: 453 PTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGS 509
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 144 bits (350), Expect = 5e-35
Identities = 61/82 (74%), Positives = 68/82 (82%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GH+ E+CGLKWS D + LASGGNDNKLFVW+ HST PV + H AAVKAIAWSPH
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHF 347
Query: 234 GLLASGGGTADRCIRFWNTLTS 299
GLLASGGGTADRCIRFWNT T+
Sbjct: 348 GLLASGGGTADRCIRFWNTTTN 369
Score = 130 bits (315), Expect = 8e-31
Identities = 57/74 (77%), Positives = 67/74 (90%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVCNL WSK+ +ELVSTHGYSQNQI+VWKYP+++++A LTGHSYRVLYLA+SPDG+ IV
Sbjct: 379 SQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIV 438
Query: 493 TGAGDETLRFLECF 534
TGAGDETLRF F
Sbjct: 439 TGAGDETLRFWNVF 452
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLAS--GGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+VC L WS + L S G + N++ VW + S + T + H V +A SP ++
Sbjct: 380 QVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVT 439
Query: 246 SGGGTADRCIRFWNTLTSQPMQISSVQLG 332
G D +RFWN S Q ++G
Sbjct: 440 GAG---DETLRFWNVFPSPKSQSRESEIG 465
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+S++C L WS + EL S G + N++ VW S V + H+ V +A SP +
Sbjct: 292 KSEICGLKWSSDNRELAS--GGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGL 349
Query: 490 VT---GAGDETLRF 522
+ G D +RF
Sbjct: 350 LASGGGTADRCIRF 363
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP-VQTYSAHVAAVKAIAWSP 224
R ++GHR V L WS L+SG D + + + V H + + + WS
Sbjct: 245 RTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSS 302
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQPM 308
LASGG D + WN ++QP+
Sbjct: 303 DNRE-LASGGN--DNKLFVWNQHSTQPV 327
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAV 203
P + L GH V L SPDGQ++ +G D L W++ + Q+ + + A+
Sbjct: 410 PTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQSRESEIGAL 467
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
G + VC + W+ G LA G + + +W + ++T H V A+AWS
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS 260
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
VC++ W+ + L G S + +W + + GH RV LA S + +G
Sbjct: 212 VCSVGWALRGTHLAI--GTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSG 267
Query: 499 AGDETL 516
+ D+++
Sbjct: 268 SRDKSI 273
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 133 bits (321), Expect = 1e-31
Identities = 59/93 (63%), Positives = 68/93 (73%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH+ EVCGLKWS D + LASGGNDN+L VW+ HS P+ + H AAVKAI WSPHQ
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 234 GLLASGGGTADRCIRFWNTLTSQPMQISSVQLG 332
LLASGGGTADRCIRFWNT Q++S+ G
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGN--QLNSIDTG 384
Score = 128 bits (310), Expect = 3e-30
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVCNLAWSK+ +E+VSTHGYSQNQI++WKYPS+++VA LTGHS RVLYLA SPDG+ IV
Sbjct: 385 SQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIV 444
Query: 493 TGAGDETLRFLECF 534
TGAGDETLRF F
Sbjct: 445 TGAGDETLRFWNVF 458
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLAS--GGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+VC L WS + + S G + N++ +W S S V T + H V +A SP ++
Sbjct: 386 QVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVT 445
Query: 246 SGGGTADRCIRFWNTLTSQPMQISSVQLGL 335
G D +RFWN S MQ GL
Sbjct: 446 GAG---DETLRFWNVFPSVKMQTPVKDTGL 472
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+S+VC L WS EL S G + NQ+LVW S + KLT H+ V + SP ++
Sbjct: 298 KSEVCGLKWSHDDRELAS--GGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSL 355
Query: 490 VT---GAGDETLRF 522
+ G D +RF
Sbjct: 356 LASGGGTADRCIRF 369
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT 179
P + L GH V L SPDGQ++ +G D L W++ + +QT
Sbjct: 416 PSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQT 465
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
G VC ++W+ +G ++ G + ++ VW V+T H +AW+ +
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNSR---I 269
Query: 240 LASG 251
L+SG
Sbjct: 270 LSSG 273
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLA 465
VC++ W++ S + + G S Q+ VW +V + GH R LA
Sbjct: 218 VCSVQWTREGSYI--SIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLA 264
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 106 bits (254), Expect = 2e-23
Identities = 49/101 (48%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WSK+ EL+S+HG++QNQ+ +WKYPS+ ++A+LTGH+ RVLY+A SPDG +
Sbjct: 359 SQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVA 418
Query: 493 TGAGDETLRFLECFFQNALTQGEQERPKPIHR--TQINEIR 609
+ AGDETLRF F ++ PK + + +N IR
Sbjct: 419 SAAGDETLRFWNVF--GVPETAKKAAPKAVSEPFSHVNRIR 457
Score = 99.5 bits (237), Expect = 2e-21
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVW-----SMHSTSP-VQTYSAHVAAVKAIAW 218
+GH QEVCGLKWS GQ LASGGNDN + +W S +ST+ + H +AVKA+AW
Sbjct: 263 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 322
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLT 296
P Q LLA+GGG DR I+FWNT T
Sbjct: 323 CPFQANLLATGGGGGDRTIKFWNTHT 348
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPHQHGLLASG 251
V + W+PDG+ +A G N++++ +W S ++T H + V ++AW+ H +L +G
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTG 241
Query: 252 G 254
G
Sbjct: 242 G 242
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP-VQTYSAHVAAVKAIA 215
QL + GH+ V L W+ L +GG D + + SP V+TY H V +
Sbjct: 216 QLRTLKGGHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 273
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
WS LASGG D + W+
Sbjct: 274 WSGSGQ-QLASGGN--DNVVHIWD 294
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH V + SPDG ++AS D L W++ +A AA KA++ P H
Sbjct: 398 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPE----TAKKAAPKAVS-EPFSH 452
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 105 bits (253), Expect = 3e-23
Identities = 44/74 (59%), Positives = 60/74 (81%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WSK+ EL+S+HG++QNQ+ +WKYPS+ ++A+LTGH+ RVLY+A SPDG +
Sbjct: 349 SQVCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVA 408
Query: 493 TGAGDETLRFLECF 534
+ AGDETLRF F
Sbjct: 409 SAAGDETLRFWNVF 422
Score = 99.5 bits (237), Expect = 2e-21
Identities = 48/86 (55%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVW-----SMHSTSP-VQTYSAHVAAVKAIAW 218
+GH QEVCGLKWS GQ LASGGNDN + +W S +ST+ + H +AVKA+AW
Sbjct: 253 RGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAW 312
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLT 296
P Q LLA+GGG DR I+FWNT T
Sbjct: 313 CPFQANLLATGGGGGDRTIKFWNTHT 338
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPHQHGLLASG 251
V + W+PDG+ +A G N++++ +W S ++T H + V ++AW+ H +L +G
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNH---ILTTG 231
Query: 252 G 254
G
Sbjct: 232 G 232
Score = 38.3 bits (85), Expect = 0.006
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP-VQTYSAHVAAVKAIA 215
QL + GH+ V L W+ L +GG D + + SP V+TY H V +
Sbjct: 206 QLRTLKGGHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLK 263
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
WS LASGG D + W+
Sbjct: 264 WSGSGQ-QLASGGN--DNVVHIWD 284
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH V + SPDG ++AS D L W++ +A AA KA+A P H
Sbjct: 388 LTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPE----TAKKAAPKAVA-EPFSH 442
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 99.1 bits (236), Expect = 3e-21
Identities = 41/74 (55%), Positives = 57/74 (77%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WSK EL+S+HG++QNQ+ +WKYPS+ ++A+L GH+ RVL++A SPDG +
Sbjct: 312 SQVCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVA 371
Query: 493 TGAGDETLRFLECF 534
+ AGDETLR F
Sbjct: 372 SAAGDETLRLWNVF 385
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVW---SMHSTSP----VQTYSAHVAAVKAIAW 218
GH +EVCGLKWS G+ LASGGNDN + +W S+ S++P + + H AAV+A+AW
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLG 332
P Q LLA+GGG D I+FWNT T ++SV+ G
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNTHTG--ACLNSVETG 311
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPHQHGLLASG 251
V + W+ DG LA G +++++ +W S V+T H + V ++AW+ H +L +G
Sbjct: 137 VTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWNNH---ILTTG 193
Query: 252 G 254
G
Sbjct: 194 G 194
Score = 36.3 bits (80), Expect = 0.024
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTYSAHVAAVKAIA 215
Q+ + GH V L W+ L +GG D K+ + +S V+TY H V +
Sbjct: 168 QVRTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLK 225
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
WS LASGG D + W+
Sbjct: 226 WS-ESGKKLASGGN--DNVVHIWD 246
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSA 188
L GH V + SPDG ++AS D L +W++ P T A
Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKA 395
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 98.7 bits (235), Expect = 4e-21
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WSK EL+S HG++QNQ+ +WKYPS+ ++A+L GH+ RVL++A SPDG +
Sbjct: 329 SQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVA 388
Query: 493 TGAGDETLRFLECF 534
+ AGDETLR F
Sbjct: 389 SAAGDETLRLWNVF 402
Score = 96.7 bits (230), Expect = 2e-20
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVW--SMHSTSP----VQTYSAHVAAVKAIAWS 221
GH +EVCGLKWS G+ LASGGNDN + +W S+ S++P + + H AAV+A+AW
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLG 332
P Q LLA+GGG D I FWNT T ++SV+ G
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTG--ACLNSVETG 328
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPHQHGLLASG 251
V + W+ DG LA G +++++ VW S V+T H + V ++AW+ H +L +G
Sbjct: 155 VTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVGSLAWNNH---ILTTG 211
Query: 252 G 254
G
Sbjct: 212 G 212
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSA 188
L GH V + SPDG ++AS D L +W++ P T A
Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKA 412
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 94.7 bits (225), Expect = 6e-20
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WS+ EL+S+HG++QNQ+ +WKYPS++++A+L GH+ RVL++A SP+G +
Sbjct: 345 SQVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVA 404
Query: 493 TGAGDETLRFLECFFQNALTQGEQERPK-PIHRTQINEIR 609
+ AGDE LR F + T + K P + +N +R
Sbjct: 405 SAAGDENLRLWNVFGEPPKTTKKAASKKYPELFSHVNSLR 444
Score = 94.3 bits (224), Expect = 8e-20
Identities = 47/97 (48%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT------YSAHVAAVKAIAWS 221
GH +EVCGLKWS G ASGGNDN + +W S QT + H AAV+A+AW
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLG 332
P Q LLA+GGG D I+FWNT T ++SV+ G
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTG--ACLNSVETG 344
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLAS--GGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+VC L WS + L S G N+L +W S S + + H + V +A SP+ + +
Sbjct: 346 QVCSLLWSQSERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVAS 405
Query: 246 SGGGTADRCIRFWNTLTSQP 305
+ G D +R WN P
Sbjct: 406 AAG---DENLRLWNVFGEPP 422
Score = 36.7 bits (81), Expect = 0.018
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTYSAHVAAVKAIA 215
Q+ + GH V L W D L +GG D K+ + +S V+TY H V +
Sbjct: 202 QVRTLRGGHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLK 259
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
WS ASGG D + W+
Sbjct: 260 WS-ESGNKQASGGN--DNVVHIWD 280
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPHQHGLLASG 251
V + W+ DG LA G +++++ +W S V+T H + V ++AW H +L +G
Sbjct: 171 VTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVGSLAWDNH---ILTTG 227
Query: 252 G 254
G
Sbjct: 228 G 228
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSA 188
P + L GH V + SP+G ++AS D L +W++ P T A
Sbjct: 376 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKKA 428
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 94.3 bits (224), Expect = 8e-20
Identities = 38/74 (51%), Positives = 57/74 (77%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
SQVC+L WS+ EL+S+HG++QNQ+ +WKYPS++++A+L GH+ RVL++A SP+G +
Sbjct: 343 SQVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVA 402
Query: 493 TGAGDETLRFLECF 534
+ AGDE LR F
Sbjct: 403 SAAGDENLRLWNVF 416
Score = 91.5 bits (217), Expect = 6e-19
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVW---SMHSTSPVQT----YSAHVAAVKAIAW 218
GH +EVCGLKWS G+ LASGGN N + +W S+ S+ P + + H AAV+A+AW
Sbjct: 247 GHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAW 306
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLG 332
P Q LLA+GGG D I+FWNT T ++SV+ G
Sbjct: 307 CPFQATLLATGGGVGDGKIKFWNTHTG--ACLNSVETG 342
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLAS--GGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+VC L WS + L S G N+L +W S S + + H + V +A SP+ + +
Sbjct: 344 QVCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVAS 403
Query: 246 SGGGTADRCIRFWNTLTSQP 305
+ G D +R WN P
Sbjct: 404 AAG---DENLRLWNVFGEPP 420
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT-YSAHVAAVKAIAWSPHQHGLLASG 251
V + W+ DG LA G +++++ +W S V+T H + V ++AW+ H +L +G
Sbjct: 168 VTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLIGGHESRVGSLAWNNH---ILTTG 224
Query: 252 G 254
G
Sbjct: 225 G 225
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSA 188
P + L GH V + SP+G ++AS D L +W++ P T A
Sbjct: 374 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTTKKA 426
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 21 RXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA 200
R P + S+ + GH + V + +SPDG+ LASG D + +W +++ +P+ T H
Sbjct: 94 RIRPVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNW 153
Query: 201 VKAIAWSPH-QHGLLASGGGTADRCIRFWN 287
V +AWSP +H L SG + + C WN
Sbjct: 154 VLTVAWSPDGKH--LVSGSKSGEICC--WN 179
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
Q V +GH V + WS D + L SG D+ L +W + + Q H V A+ W
Sbjct: 393 QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDW 452
Query: 219 SPHQHGLLASGGGTADRCIRFW 284
SP +++ G DR ++ W
Sbjct: 453 SPDGEKVVSGG---KDRVLKLW 471
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/91 (29%), Positives = 45/91 (49%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
Q + L GH+Q V + +SPDG+ +AS D + +W+ + V + HV V ++W
Sbjct: 351 QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSW 410
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQ 311
S LL+ G+ D ++ W T + Q
Sbjct: 411 SADSRLLLS---GSKDSTLKIWEIRTKKLKQ 438
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
V ++WS S L+S G + + +W+ + L GH+ V + SPDGE +V+G
Sbjct: 405 VYQVSWSADSRLLLS--GSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSG 462
Query: 499 AGDETLR 519
D L+
Sbjct: 463 GKDRVLK 469
Score = 37.9 bits (84), Expect = 0.008
Identities = 22/71 (30%), Positives = 37/71 (52%)
Frame = +1
Query: 337 SKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
+K S E V T Y Q + + P + GH+ VL ++ SPDG+ + +G+GD T+
Sbjct: 75 NKVSVEKVLTIVYQQQAVFRIR-PVNRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTV 133
Query: 517 RFLECFFQNAL 549
R + + + L
Sbjct: 134 RLWDLYTETPL 144
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQS-----LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
L GH++ + G+ W P S + D +W + + S H AV + W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 219 SPHQHGLLASGGGTADRCIRFWNT 290
G++ + G+ D I+ W T
Sbjct: 250 G--GDGIIYT--GSQDCTIKMWET 269
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +1
Query: 388 ILVWKYPSLTQVAK--LTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+ +W+ PS+++ K LTGH V ++ SPDG+ I + + D+++R
Sbjct: 341 MFLWE-PSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +1
Query: 328 LAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGA 501
+++S +L S G + +W + T + GH VL +A SPDG+ +V+G+
Sbjct: 115 VSFSPDGKQLAS--GSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGS 170
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/80 (33%), Positives = 51/80 (63%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + V L+++PDG+ + SGG DN + VW + + + + +H ++++ + PH+
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF- 198
Query: 237 LLASGGGTADRCIRFWNTLT 296
LLA+ G+ADR ++FW+ T
Sbjct: 199 LLAT--GSADRTVKFWDLET 216
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ R L GHR + + P G+ ASG D L +W + + TY H V + +
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
+P +++ G D ++ W+ + + G +++L
Sbjct: 152 TPDGRWVVSGG---EDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/59 (18%), Positives = 29/59 (49%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
L +GG D+K+ +W++ + + + H + + ++ + + + G A I+ W+
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE---VLVAAGAASGTIKLWD 87
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 58.0 bits (134), Expect = 7e-09
Identities = 27/80 (33%), Positives = 51/80 (63%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + V L+++PDG+ + SGG DN + VW + + + + +H ++++ + PH+
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEF- 198
Query: 237 LLASGGGTADRCIRFWNTLT 296
LLA+ G+ADR ++FW+ T
Sbjct: 199 LLAT--GSADRTVKFWDLET 216
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ R L GHR + + P G+ ASG D L +W + + TY H V + +
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
+P +++ G D ++ W+ + + G +++L
Sbjct: 152 TPDGRWVVSGG---EDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/59 (18%), Positives = 29/59 (49%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
L +GG D+K+ +W++ + + + H + + ++ + + + G A I+ W+
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE---VLVAAGAASGTIKLWD 87
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/80 (32%), Positives = 51/80 (63%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + V L+++PDG+ + SGG DN + VW + + + + +H ++++ + PH+
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEF- 291
Query: 237 LLASGGGTADRCIRFWNTLT 296
LLA+ G+AD+ ++FW+ T
Sbjct: 292 LLAT--GSADKTVKFWDLET 309
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/100 (23%), Positives = 43/100 (43%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R L GHR + + P G+ ASG D L +W + + TY H V + ++P
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 247
Query: 228 QHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
+++ G D ++ W+ + + G +++L
Sbjct: 248 GRWIVSGG---EDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
L +GG D+K+ +W++ + + + H + + ++ + + GL+A+ G A I+ W+
Sbjct: 125 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE-GLVAA--GAASGTIKLWD 180
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/79 (34%), Positives = 40/79 (50%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GH +V L WSPD LASG DN + +W+M + H++ VK + W P
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDP-IG 172
Query: 234 GLLASGGGTADRCIRFWNT 290
+AS + D+ + W T
Sbjct: 173 SFIAS--QSDDKTVIIWRT 189
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVW------SMHSTSPVQTYSAHVAAVKAI 212
VL+GH V G+ W P G +AS +D + +W H T S + +
Sbjct: 155 VLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTFFRRL 214
Query: 213 AWSPHQHGLLASGG 254
WSP H L + G
Sbjct: 215 GWSPCGHFLTTTHG 228
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIV 492
+ V +L WS S L S G N + +W + L GH V + P G I
Sbjct: 119 ADVVDLNWSPDDSMLAS--GSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIA 176
Query: 493 TGAGDETL 516
+ + D+T+
Sbjct: 177 SQSDDKTV 184
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/114 (25%), Positives = 50/114 (43%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ R GHR +++ P G+ LASG +D L VW +QTY H + I +
Sbjct: 40 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF 99
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLDSRLLT 380
SP +++ G D ++ W+ + + G + +L L+ L T
Sbjct: 100 SPDGRWVVSGG---LDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/80 (31%), Positives = 49/80 (61%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + + +++SPDG+ + SGG DN + VW + + + + H ++++ + P +
Sbjct: 88 KGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEF- 146
Query: 237 LLASGGGTADRCIRFWNTLT 296
LLA+G +ADR ++FW+ T
Sbjct: 147 LLATG--SADRTVKFWDLET 164
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH V + ++ + + +G + + +W + + V+ ++ H + A+ + P
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 234 GLLASGGGTADRCIRFWNT 290
LAS G++D +R W+T
Sbjct: 63 -FLAS--GSSDTNLRVWDT 78
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G S + VW + GH+ + + SPDG +V+G D ++
Sbjct: 67 GSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 116
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
QGH +V + +SPD Q LA+G +DNK+ VW++ S + T++ H AV A+ + H
Sbjct: 346 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 405
Query: 237 LLASGGGTADRCIRFWN 287
LL++ + D +R W+
Sbjct: 406 LLSA---SLDGTVRAWD 419
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTYSAHVAAVKAIA 215
Q+ +L GH V GL +SP Q LAS D + +W + S V+T+ H V +A
Sbjct: 468 QIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF-RHNHDVLTVA 526
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTL 293
+ P L +S T D I FW+T+
Sbjct: 527 FRPDGKQLASS---TLDGQINFWDTI 549
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 385 QILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
Q+LVW + + T + K GH + V + SPD + + TGA D ++
Sbjct: 330 QLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVK 374
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 69 QEVCGLKWSPDGQSLASGGNDN-KLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
++ L P G + +G D+ ++FVWS + S H A V + +SP LLA
Sbjct: 435 RQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQ-LLA 493
Query: 246 SGGGTADRCIRFWNTLTSQ 302
S + D +R W+ S+
Sbjct: 494 S--SSWDYTVRLWDVFASK 510
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
QGH +V + +SPD Q LA+G +DNK+ VW++ S + T++ H AV A+ + H
Sbjct: 386 QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHS 445
Query: 237 LLASGGGTADRCIRFWN 287
LL++ + D +R W+
Sbjct: 446 LLSA---SLDGTVRAWD 459
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTYSAHVAAVKAIA 215
Q+ +L GH V GL +SP Q LAS D + +W + S V+T+ H V +A
Sbjct: 508 QIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF-RHNHDVLTVA 566
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTL 293
+ P L +S T D I FW+T+
Sbjct: 567 FRPDGKQLASS---TLDGQINFWDTI 589
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 385 QILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
Q+LVW + + T + K GH + V + SPD + + TGA D ++
Sbjct: 370 QLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVK 414
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 69 QEVCGLKWSPDGQSLASGGNDN-KLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
++ L P G + +G D+ ++FVWS + S H A V + +SP LLA
Sbjct: 475 RQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQ-LLA 533
Query: 246 SGGGTADRCIRFWNTLTSQ 302
S + D +R W+ S+
Sbjct: 534 S--SSWDYTVRLWDVFASK 550
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ + L HR++V L+WSPD L SG DN +W ++ S Q AH V+ +AW
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 219 SP 224
P
Sbjct: 104 DP 105
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAA------VKAIAWSPHQHGLLASGGGTADRC 272
LASG + +LF+W +H + Q++ H + V + WSP L++ G+ D
Sbjct: 20 LASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLIS---GSVDNS 76
Query: 273 IRFWNTLTSQPMQI 314
W+ QI
Sbjct: 77 CIIWDVNKGSVHQI 90
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ + L HR++V L+WSPD L SG DN +W ++ S Q AH V+ +AW
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 219 SP 224
P
Sbjct: 163 DP 164
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +3
Query: 21 RXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA 200
+ P + L H V +++SP G+ LASG + +LF+W +H + Q++ H +
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSL 108
Query: 201 ------VKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
V + WSP L++ G+ D W+ QI
Sbjct: 109 SFHRKDVLDLQWSPDDAYLIS---GSVDNSCIIWDVNKGSVHQI 149
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 400 KYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGA 501
K PS++ + LT H V + SP GE + +GA
Sbjct: 50 KVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGA 83
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ + L HR++V L+WSPD L SG DN +W ++ S Q AH V+ +AW
Sbjct: 103 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 162
Query: 219 SP 224
P
Sbjct: 163 DP 164
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Frame = +3
Query: 21 RXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA 200
+ P + L H V +++SP G+ LASG + +LF+W +H + Q++ H +
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSL 108
Query: 201 ------VKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
V + WSP L++ G+ D W+ QI
Sbjct: 109 SFHRKDVLDLQWSPDDAYLIS---GSVDNSCIIWDVNKGSVHQI 149
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 400 KYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGA 501
K PS++ + LT H V + SP GE + +GA
Sbjct: 50 KVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGA 83
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 132 NKLFVWSMHSTSPVQTYSA-HVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPM 308
N ++++ +P+ + H AA+ I WSP+ L S + F + + +
Sbjct: 320 NSVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQDGYCTLVEFEDKELGEAV 379
Query: 309 QISSVQLGL 335
IS + L L
Sbjct: 380 SISGLLLVL 388
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM----HSTSPVQTYSAHVAAVKAI 212
SR QGH+++V + W+ +G LASG D +W++ HS + H +V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 213 AWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQ 311
W P L+A+ G D+ +R W+ + + Q
Sbjct: 73 CWDPKHSDLVATASG--DKSVRLWDARSGKCTQ 103
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +1
Query: 298 RSRCRSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPD 477
R + +V +AW+ T G ++L YPSL + LT H+ +A+ P
Sbjct: 145 RRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVL--SYPSLKPLDTLTAHTAGCYCIAIDPK 202
Query: 478 GEAIVTGAGD 507
G G+ D
Sbjct: 203 GRYFAVGSAD 212
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 GHRQEVCGLK---WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
GHRQ ++ D +ASG D+++++W++ +T P++ S H V ++W+P
Sbjct: 438 GHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKN 497
Query: 231 HGLLASGGGTADRCIRFW 284
+LAS + D+ IR W
Sbjct: 498 PRMLAS--ASDDQTIRIW 513
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVA--AVKA 209
++L L+ H+ V + WSPD L + GN L +W + + T+ + V +
Sbjct: 259 VELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSS 318
Query: 210 IAWSPHQHGLLASGGGTADRCIRFWNT 290
AW P L+ G +R I W+T
Sbjct: 319 CAWFPDSTRLVC-GSSDPERGIVMWDT 344
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
V + AW S+ LV + I++W A +V+ LA++PDGE+++T
Sbjct: 316 VSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITV 375
Query: 499 AGDETLRFL 525
D+ +R L
Sbjct: 376 FSDKEIRIL 384
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAG-DETLR 519
G +Q+ +W + + L+GHS V ++ +P ++ A D+T+R
Sbjct: 461 GSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIR 511
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/84 (32%), Positives = 46/84 (54%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R+ GHR V L SPDG+ +ASG D + +W + + + H + V ++++S
Sbjct: 535 RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYS-G 593
Query: 228 QHGLLASGGGTADRCIRFWNTLTS 299
+ LLAS G+AD ++ W+ +S
Sbjct: 594 EGSLLAS--GSADCTVKLWDVTSS 615
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/120 (25%), Positives = 56/120 (46%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH V ++SP G AS +D +WSM P++ + H++ V W P+ +
Sbjct: 457 KGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD---WHPNCNY 513
Query: 237 LLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLDSRLLTEPDTGVEISVVD 416
+ G++D+ +R W+ T + ++I +V +L + D R + D I + D
Sbjct: 514 IAT---GSSDKTVRLWDVQTGECVRIFIGHRSMVLSL-AMSPDGRYMASGDEDGTIMMWD 569
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/97 (26%), Positives = 41/97 (42%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+L GH V +SP G + S D + +WS + + Y H V +SP
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVE 341
H + + DR R W+ QP++I + L V+
Sbjct: 473 HYFASC---SHDRTARIWSMDRIQPLRIMAGHLSDVD 506
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/102 (25%), Positives = 48/102 (47%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
RS V +LA S + S G I++W + + L GH+ V L+ S +G +
Sbjct: 541 RSMVLSLAMSPDGRYMAS--GDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 490 VTGAGDETLRFLECFFQNALTQGEQERPKPIHRTQINEIRTY 615
+G+ D T++ + LT+ E+ K + ++ +RT+
Sbjct: 599 ASGSADCTVKLWDVTSSTKLTKAEE---KNGNSNRLRSLRTF 637
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
G S + +W + V GH VL LA+SPDG + +G D T+
Sbjct: 517 GSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTI 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS 167
L GH V L +S +G LASG D + +W + S++
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSST 616
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/79 (30%), Positives = 41/79 (51%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ QGH ++V + +SP+G LASGG DN+ +W + + AHV V + + P +
Sbjct: 167 IFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQE 226
Query: 231 HGLLASGGGTADRCIRFWN 287
LA+ + D + W+
Sbjct: 227 RYFLAT--ASHDMNVNIWS 243
Score = 37.5 bits (83), Expect = 0.010
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 90 WSPDGQSL----ASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGG 257
W DG L AS G D+ VW + + + + H+ V ++ +SP+ + LASGG
Sbjct: 134 WKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYH-LASGG- 191
Query: 258 TADRCIRFWNTLTSQPMQISSVQLGLVETLQ 350
D R W+ + + I + LV ++
Sbjct: 192 -EDNQCRIWDLRMRKLLYIIPAHVNLVSQVK 221
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/114 (23%), Positives = 51/114 (44%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++ R GHR +++ P G+ LASG +D L +W + +QTY H + I +
Sbjct: 91 KMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF 150
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLDSRLLT 380
+P +++ G D ++ W+ + + G + +L L+ L T
Sbjct: 151 TPDGRWVVSGG---LDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLAT 201
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/80 (30%), Positives = 49/80 (61%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + + ++++PDG+ + SGG DN + VW + + + + H ++++ + P +
Sbjct: 139 KGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEF- 197
Query: 237 LLASGGGTADRCIRFWNTLT 296
LLA+G +ADR ++FW+ T
Sbjct: 198 LLATG--SADRTVKFWDLET 215
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 117 SGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
+GG+D K+ +W++ + + + H +AV ++A+ + +LA G + I+ W+
Sbjct: 33 TGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLA---GASSGVIKLWD 86
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 51.6 bits (118), Expect = 6e-07
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP----VQTYSAH----V 194
+ + L+GH+ + G+ SPDG L + G DNKL VW M +P V+ + H
Sbjct: 213 EATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFE 272
Query: 195 AAVKAIAWSPHQHGLLASGGGTADRCIRFWNT 290
+ +WSP + A G++DR + W+T
Sbjct: 273 KNLLKCSWSPDGTKVTA---GSSDRMVHIWDT 301
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +3
Query: 9 PAGTRXTPPIQLS-RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-STSPVQTY 182
P G T ++ +L GH V +K++P G +ASG +D ++F+W +H
Sbjct: 33 PNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVL 92
Query: 183 SAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQ 311
H A+ + W+ ++++ + D+ +R W+ T + ++
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSA---SPDKTVRAWDVETGKQIK 132
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
VL+GH+ + L W+ DG + S D + W + + ++ + H + V + P +
Sbjct: 91 VLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCC--PTR 148
Query: 231 HGLLASGGGTADRCIRFWN 287
G G+ D + W+
Sbjct: 149 RGPPLIISGSDDGTAKLWD 167
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +3
Query: 30 PPIQLSRVLQGHR----QEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVA 197
P + ++ +GH+ + + WSPDG + +G +D + +W S + H
Sbjct: 256 PQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTG 315
Query: 198 AVKAIAWSP 224
+V + P
Sbjct: 316 SVNECVFHP 324
Score = 32.3 bits (70), Expect = 0.39
Identities = 14/62 (22%), Positives = 27/62 (43%)
Frame = +3
Query: 66 RQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
+ ++ + +S + +GG DN + VW + T H + ++ SP LL
Sbjct: 180 KYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 246 SG 251
+G
Sbjct: 240 NG 241
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
G N + VW L GH + ++LSPDG ++T D L
Sbjct: 198 GGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 370 GYSQNQILVWK-YPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G +I +W+ + L GH +L L + DG IV+ + D+T+R
Sbjct: 71 GSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVR 121
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/79 (30%), Positives = 39/79 (49%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
V QGH + V + +SP+G LASGG DN+ +W + + AH V + + P +
Sbjct: 418 VFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQE 477
Query: 231 HGLLASGGGTADRCIRFWN 287
LA+ + D + W+
Sbjct: 478 GYFLAT--ASYDMKVNIWS 494
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/98 (27%), Positives = 47/98 (47%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH + V G+ + DG AS G D+ VW + + + + H+ V ++ +SP+ +
Sbjct: 378 EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYH 437
Query: 237 LLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQ 350
LASGG D R W+ + + I LV ++
Sbjct: 438 -LASGG--EDNQCRIWDLRMRKSLYIIPAHANLVSQVK 472
Score = 34.3 bits (75), Expect = 0.096
Identities = 21/91 (23%), Positives = 41/91 (45%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L + +GH + + + P G+ L + D +W +++ + + H +V IA+
Sbjct: 331 LLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAF- 389
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
Q G LA+ G D R W+ T + + +
Sbjct: 390 -QQDGALAASCG-LDSLARVWDLRTGRSILV 418
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
VL+ H++ + +SP LA+ D +W T +QT+ H+ + +A+ P
Sbjct: 293 VLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTL-LQTFEGHLDRLARVAFHPSG 351
Query: 231 HGLLASGGGTADRCIRFWNTLT 296
L G + D+ R W+ T
Sbjct: 352 KYL---GTTSYDKTWRLWDINT 370
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/67 (22%), Positives = 29/67 (43%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
V + + ++T Y ++ +W + V L GH +V L ++ D I T
Sbjct: 468 VSQVKYEPQEGYFLATASYDM-KVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATV 526
Query: 499 AGDETLR 519
+ D T++
Sbjct: 527 SHDRTIK 533
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H Q V W DG ++ SGG D + +W + S T + H + A+AW P + LL
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMN-LL 129
Query: 243 ASGGGTADRCIRFWNTLTSQPM 308
A+ G+ D+ +++W+T P+
Sbjct: 130 AT--GSWDKTLKYWDTRQQNPV 149
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT 179
H + + W P LA+G D L W +PV T
Sbjct: 113 HEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHT 151
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/85 (28%), Positives = 42/85 (49%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
P + + L+GH + +K+S DG LAS D + +WS + S + Y H + + +
Sbjct: 32 PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDL 91
Query: 213 AWSPHQHGLLASGGGTADRCIRFWN 287
AWS H ++ + D +R W+
Sbjct: 92 AWSSDSHYTCSA---SDDCTLRIWD 113
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
+G+ + SG DN +++W + + + +Q H AV +++ P Q+ ++S G D+ IR
Sbjct: 269 NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNE-ISSSGNHLDKTIR 327
Query: 279 FW 284
W
Sbjct: 328 IW 329
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHST-SPVQTYSAHVAAVKAIAWSPHQH 233
+GH + L WS D S +D L +W S ++ H V + ++P +
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSN 141
Query: 234 GLLASGGGTADRCIRFWNTLTSQ 302
L+ S G+ D IR W T +
Sbjct: 142 -LIVS--GSFDETIRIWEVKTGK 161
Score = 33.5 bits (73), Expect = 0.17
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAK-LTGHSYRVLYLALSPDGEAI 489
S + +LAWS S S + +W S + K L GH+ V + +P I
Sbjct: 86 SGISDLAWSSDSHYTCSAS--DDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLI 143
Query: 490 VTGAGDETLRFLE 528
V+G+ DET+R E
Sbjct: 144 VSGSFDETIRIWE 156
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
P + +VL+GH V + ++P + SG D + +W + + V+ AH + ++
Sbjct: 117 PYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV 176
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPV---QTYSAHVAAV 203
P Q +++L+ H EV L++S +G+ LAS D +W + + + T H V
Sbjct: 263 PSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPV 322
Query: 204 KAIAWSPHQHGLLASGGGTADRCIRFWN 287
AI WSP +L G A+ IR W+
Sbjct: 323 IAILWSPDDRQVLTCG---AEEVIRRWD 347
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
I L L GH + V + WSPD + + + G + + W + S V Y + +
Sbjct: 309 ISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCG 368
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
W P G++A G DR I W+
Sbjct: 369 WYPDGQGIIA---GMTDRSICMWD 389
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFW 284
+ASG D+++++W + + H AV ++WSP +LAS + D IR W
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLAS--ASDDGTIRIW 559
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 78 CGLKWSPDGQSLASGGNDNKLFVWSM 155
CG W PDGQ + +G D + +W +
Sbjct: 367 CG--WYPDGQGIIAGMTDRSICMWDL 390
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH ++ L S + +AS ND + VW + P+ H AV AIA+SP Q
Sbjct: 344 RGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQAS 403
Query: 237 LLASGGGTADRCIRFWNTLTSQ 302
+ + D R W+ SQ
Sbjct: 404 VYQLLSSSDDGTCRIWDARYSQ 425
Score = 36.7 bits (81), Expect = 0.018
Identities = 25/104 (24%), Positives = 46/104 (44%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
+Q + L+GHR V + G+ + +G +D + +WSM + + + H + +A
Sbjct: 295 MQNIKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLA 354
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
S + + L+AS D IR W P+ + G V +
Sbjct: 355 VSSN-NALVASASN--DFVIRVWRLPDGMPISVLRGHTGAVTAI 395
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHST------SPVQTYSAHVAAVKAI 212
L GH +E GL WSP + L SG D K+ +W + +T + + Y H +A+ +
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 213 AWSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
+W L S G D + W+T T+Q
Sbjct: 224 SWHMKNENLFGSAG--EDGRLVIWDTRTNQ 251
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSMHS-TSPVQTYSAHVAAVKAI 212
Q+ ++ H +EV L ++P + LA+ +D+ + ++ + +P+ S+H V +
Sbjct: 251 QMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQV 310
Query: 213 AWSPHQHGLLASGGGTADRCIRFWN 287
W P+ +LAS G DR + W+
Sbjct: 311 EWDPNHETVLASSG--EDRRLMVWD 333
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
V +GH + + W ++L S G D +L +W + H V ++++P
Sbjct: 212 VYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPF 271
Query: 228 QHGLLAS 248
+LA+
Sbjct: 272 NEWVLAT 278
Score = 35.1 bits (77), Expect = 0.055
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHSTSPVQ 176
V+ H EV ++W P+ ++ LAS G D +L VW ++ Q
Sbjct: 299 VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQ 341
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHST------SPVQTYSAHVAAVKAI 212
L GH QE GL WS + L SG D ++ +W + +T +P+ Y H + ++ +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 213 AWSPHQHGLLASGGGTADRC-IRFWNTLTSQ 302
AW + S G D C + W+ T+Q
Sbjct: 225 AWHMKNENIFGSAG---DDCQLVIWDLRTNQ 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSMHS-TSPVQTYSAHVAAVKAI 212
Q+ ++ H +E+ L ++P + LA+ +D+ + ++ + T+P+ S H V +
Sbjct: 252 QMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQV 311
Query: 213 AWSPHQHGLLASGGGTADRCIRFWN 287
W P+ +LAS G DR + W+
Sbjct: 312 EWDPNHETVLASSG--EDRRLMVWD 334
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHSTSPVQ 176
VL H EV ++W P+ ++ LAS G D +L VW ++ Q
Sbjct: 300 VLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQ 342
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/97 (19%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
V +GH+ + + W +++ S G+D +L +W + + H + ++++P
Sbjct: 213 VYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPF 272
Query: 228 QHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLV 338
+LA+ + + LT+ P+ + S G V
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTA-PLHVLSKHEGEV 308
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+ H +E L S DG+ LA+GG D + +W + + VQ + H V + + ++G
Sbjct: 219 KNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF---RYG 275
Query: 237 LLASGGGTADRCIRFWN 287
G+ DR ++ WN
Sbjct: 276 TSELYSGSFDRTVKVWN 292
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
++ GH+ EV +KW P G LAS +D+ +W++ ++ V H + I WSP
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GHR+ V L +SP+G+ +ASG D + +WS+ V+TY+ + + + W+ + +
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKI 597
Query: 240 LA 245
A
Sbjct: 598 AA 599
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
R+L+GH EVC WSP LASG D +WS+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSI 294
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +3
Query: 69 QEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLAS 248
++V L W+ +G LA+G D + +W+++ + T S H + ++ W+ LL
Sbjct: 325 KDVTTLDWNGEGTLLATGSCDGQARIWTLNG-ELISTLSKHKGPIFSLKWNKKGDYLLT- 382
Query: 249 GGGTADRCIRFWN 287
G+ DR W+
Sbjct: 383 --GSVDRTAVVWD 393
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQ---------SLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVK 206
L+ H +E+ ++WSP G +LAS D+ + +W + +++ H V
Sbjct: 486 LREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVY 545
Query: 207 AIAWSPHQHGLLASGGGTADRCIRFWN 287
++A+SP+ +AS G+ D+ I W+
Sbjct: 546 SLAFSPNGE-YIAS--GSLDKSIHIWS 569
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+L L H+ + LKW+ G L +G D VW + + Q + H + W
Sbjct: 356 ELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDW 415
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
+ +W + GH V LA SP+GE I +G+ D+++
Sbjct: 523 VKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 415 TQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+ V L GH+ V A SP + +G+GD T R
Sbjct: 256 SDVRILEGHTSEVCACAWSPSASLLASGSGDATAR 290
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 313 SQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYL 462
S+VC AWS +S L S G + +I W P + A TG + L L
Sbjct: 266 SEVCACAWSPSASLLASGSGDATARI--WSIPEGSFKAVHTGRNINALIL 313
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 45.2 bits (102), Expect = 5e-05
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 HPPAGT--RXTPPIQLSRVLQGHRQEVCGLKWSPDG-QSLASGGNDNKLFVWSMHST--S 167
H P G+ + P ++S L GH + V + WS LAS G D ++VW++ S
Sbjct: 137 HRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK 196
Query: 168 PVQTYSAHVAAVKAIAWSPHQHGLLASG 251
V+ + H A VK + WS LL+ G
Sbjct: 197 KVRAFLHHNAPVKDVKWSKQGLSLLSCG 224
Score = 36.3 bits (80), Expect = 0.024
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGL----KWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVA 197
PP +L++ + V G +SPDG++LASG +D ++++ ST+ ++ A+
Sbjct: 370 PPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQ 429
Query: 198 AVKAIAWSP 224
+++ P
Sbjct: 430 PCVNVSYHP 438
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 183 SAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
+ H AV AI WS LLAS G D + WN ++ ++
Sbjct: 157 TGHTKAVTAIDWSTSHVHLLASAG--LDGAVYVWNVWSNDKKKV 198
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 44.8 bits (101), Expect = 7e-05
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADR 269
+S DG+ LAS G+D K +W + P T H A + I +SP Q L S + D+
Sbjct: 659 FSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATS---SFDK 715
Query: 270 CIRFWN 287
+R W+
Sbjct: 716 TVRVWD 721
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +3
Query: 27 TPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAV 203
T ++ L+ H + +++SP LA+ D + VW + ++T+ H + V
Sbjct: 680 TDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMV 739
Query: 204 KAIAWSPHQHGLLASGGGTADRCIRFWN 287
++ + P + L+ S D IR+W+
Sbjct: 740 TSLDFHPIKDDLICSCDN--DNEIRYWS 765
Score = 31.9 bits (69), Expect = 0.51
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP---VQTYSAHVAAVKAIAWSP 224
LQGH + + W P G LAS D + VW++ + S V S + ++ + P
Sbjct: 814 LQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHP 872
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
LL G + + WN ++ M + + + GL+ +L
Sbjct: 873 AYPSLLVIG---CYQSLELWNMSENKTMTLPAHE-GLITSL 909
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMHSTSPVQTY 182
R GH V L + P L S NDN++ WS+++ S + Y
Sbjct: 730 RTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVY 775
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 18 TRXTPPIQLSRVLQGHRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSMHSTSPVQTYSAHV 194
T PP R Q H +EV + ++P + S + D+ + +W+M + V+T+ H
Sbjct: 90 TALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHA 149
Query: 195 AAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
V W+P + AS G D +R W+
Sbjct: 150 YCVYQAVWNPKHGDVFASASG--DCTLRIWD 178
Score = 31.5 bits (68), Expect = 0.67
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWS-MHSTSPVQTYSAHVAAVKAIAWSP 224
VL GH V +K+SP +SL AS D + +W M + V Y H I S
Sbjct: 231 VLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALVGRYDHHTEFAVGIDMSV 290
Query: 225 HQHGLLASGGGTADRCIRFW 284
GL+AS G D + W
Sbjct: 291 LVEGLMASTGW--DELVYVW 308
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.4 bits (100), Expect = 9e-05
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH+ V +KW+ +G L + D + ++ + + +Q++ H V ++AW P
Sbjct: 306 LHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHE 365
Query: 234 GLLASGGGTADRC 272
SG C
Sbjct: 366 EYFVSGSSDGSIC 378
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GH +V + W P L SGG D + +W S + + H V ++ W+ + + L
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 240 LASGGGTADRCIRFWNTLTSQPMQ 311
L + + D+ I+ ++ T + +Q
Sbjct: 326 LTA---SKDQIIKLYDIRTMKELQ 346
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L +R + + W+P G+ L +G + +W+ S + AH ++++ WS H
Sbjct: 119 LNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWS-HNE 177
Query: 234 GLLASG--GGTADRCIRFW 284
+ SG GGT +++W
Sbjct: 178 NYMVSGDDGGT----LKYW 192
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/56 (21%), Positives = 27/56 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+LQ H Q + + WS + + SG + L W + + +AH +++ +++
Sbjct: 160 ILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSF 215
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVW 149
H V L W P G L SG ND+ W
Sbjct: 395 HDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R L GH V + S DGQ SG D +L +W + + + + H V ++A+S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 228 QHGLLASGGGTADRCIRFWNTL 293
++++ + DR I+ WNTL
Sbjct: 117 NRQIVSA---SRDRTIKLWNTL 135
Score = 38.3 bits (85), Expect = 0.006
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+L L GH + + SPDG ASGG D + +W + + + A + + ++ +
Sbjct: 184 KLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCF 242
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQL 329
SP+++ L A+ + IR W+ + ++ V L
Sbjct: 243 SPNRYWLCAA----TENSIRIWDLESKSVVEDLKVDL 275
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 427 KLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+LTGHS+ V + LS DG+ ++G+ D LR
Sbjct: 58 RLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/85 (18%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM--HSTSPVQTYSAHVAAVKAI 212
+ +R GH ++V + +S D + + S D + +W+ + H V +
Sbjct: 96 ETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCV 155
Query: 213 AWSPHQHGLLASGGGTADRCIRFWN 287
+SP+ + + D+ ++ WN
Sbjct: 156 RFSPNTL-VPTIVSASWDKTVKVWN 179
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R LQGH +V L W+P+ + S D +L VW+ ++ A V A+SP+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 228 QHGLLASG 251
+ G
Sbjct: 119 GQSVACGG 126
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAH----VAAVKAIA 215
R GH +V +K+ PDG +G +D ++ + + +Q Y H V +IA
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
+S G L G ++ W+TL +
Sbjct: 302 FS--VSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTS------PV-QTYSAHVAAVKAIAWSPHQHGLLAS 248
+SP+GQS+A GG D+ ++S+ ST+ PV + + H V + P++ L +
Sbjct: 115 FSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 249 GGGTADRCIRFWNTLT 296
G D+ W+ T
Sbjct: 175 SSG--DQTCILWDVTT 188
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R LQGH +V L W+P+ + S D +L VW+ ++ A V A+SP+
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 228 QHGLLASG 251
+ G
Sbjct: 119 GQSVACGG 126
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAH----VAAVKAIA 215
R GH +V +K+ PDG +G +D ++ + + +Q Y H V +IA
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
+S G L G ++ W+TL +
Sbjct: 302 FS--VSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTS------PV-QTYSAHVAAVKAIAWSPHQHGLLAS 248
+SP+GQS+A GG D+ ++S+ ST+ PV + + H V + P++ L +
Sbjct: 115 FSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 249 GGGTADRCIRFWNTLT 296
G D+ W+ T
Sbjct: 175 SSG--DQTCILWDVTT 188
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 439 HSYRVLYLALSPDGEAIVTGAGDETLR 519
H R+ L LS DG A+ TG+ D L+
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLK 366
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R + GH V + S DGQ SG D +L +W + + + + H V ++A+S
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 228 QHGLLASGGGTADRCIRFWNTL 293
++++ + DR I+ WNTL
Sbjct: 117 NRQIVSA---SRDRTIKLWNTL 135
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/97 (24%), Positives = 46/97 (47%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+L L GH + + SPDG ASGG D + +W + + + A + + ++ +
Sbjct: 184 KLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAG-SIIHSLCF 242
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQL 329
SP+++ L A+ + IR W+ + ++ V L
Sbjct: 243 SPNRYWLCAA----TENSIRIWDLESKSVVEDLKVDL 275
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQ---VA--KLTGHSYRVLYLALSPDGE 483
V +A +S+++ T ++ I++WK + VA ++TGHS+ V + LS DG+
Sbjct: 18 VTAIATPVDNSDVIVTSSRDKS-IILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQ 76
Query: 484 AIVTGAGDETLR 519
++G+ D LR
Sbjct: 77 FALSGSWDGELR 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM--HSTSPVQTYSAHVAAVKAIAW 218
+R GH ++V + +S D + + S D + +W+ + H V + +
Sbjct: 98 TRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRF 157
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
SP+ + + D+ ++ WN
Sbjct: 158 SPNTL-VPTIVSASWDKTVKVWN 179
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 84 LKWSPDGQSLASGGNDNKLFVWSM 155
L WS DG +L SG D + VW +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +3
Query: 6 PPAGTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMH-STSPVQT 179
P +G+ PI + GH V L+WSP +++ AS D + VW + SP +
Sbjct: 253 PASGSWAVDPIPFA----GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALS 308
Query: 180 YSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
+ AH A V I+W+ +LASG IR
Sbjct: 309 FKAHNADVNVISWNRLASCMLASGSDDGTFSIR 341
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
+ +GH V + DG S G D L +W+++++ + TY H V A+A
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKK 636
Query: 228 QHGLLASGGGTADRCIRFWNTLTS 299
++A+GGG D I W+ T+
Sbjct: 637 TE-MIATGGG--DAVINLWHDSTA 657
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
++G + L SPD + L S G+ ++ VW + + ++++ H V +A
Sbjct: 56 IEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA-SG 114
Query: 234 GLLASGGGTADRCIRFWN 287
GLLA+ G ADR + W+
Sbjct: 115 GLLATAG--ADRKVLVWD 130
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R +GH V G+ G LA+ G D K+ VW + + H V +I + P
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 228 QH-GLLASGGGTADRCIRFWN 287
+ +L S G+ D +R W+
Sbjct: 156 SNKNILIS--GSDDATVRVWD 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/83 (21%), Positives = 43/83 (51%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GH++ + +++S Q + + D + +W++ S ++T+ H ++V ++
Sbjct: 537 LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGT 596
Query: 234 GLLASGGGTADRCIRFWNTLTSQ 302
++ G AD ++ WN TS+
Sbjct: 597 QFVSCG---ADGLLKLWNVNTSE 616
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +1
Query: 346 SSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+ LV T G +W+ P L V L GH R+ + S + ++T +GD+T++
Sbjct: 510 NDSLVCT-GSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVK 566
Score = 36.7 bits (81), Expect = 0.018
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKW--SPDGQSL-ASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
S VL GH++ V L S G L +G D + +W+ S S + + H + A+A
Sbjct: 394 SYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVA 453
Query: 216 WSPHQHGLLASGGGTADRCIRFWN 287
++ SG G DR ++ W+
Sbjct: 454 FAKKSFSFFVSGSG--DRTLKVWS 475
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS---PVQTYSAHVAAVKAIAWS 221
+++ H V + S DG +L S G D + +W +H S V TY A + +
Sbjct: 187 IMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGT 246
Query: 222 P 224
P
Sbjct: 247 P 247
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH+ V L +S DGQ LASGG D + ++ S + A ++ + W P H
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 234 GLLASGGGTADRCIRFWN 287
+LA G+ D + WN
Sbjct: 169 IVLA---GSEDCSLWMWN 183
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 60 GHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
GH+ E+ L SP D +A+GG D+K F+W + + H +V +A+S +
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS-YDGQ 126
Query: 237 LLASGG 254
LLASGG
Sbjct: 127 LLASGG 132
Score = 35.1 bits (77), Expect = 0.055
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+ ++ LA S + LV+T G ++ +WK + A+L GH V LA S DG+ +
Sbjct: 70 KGELYALACSPTDATLVATGG-GDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLL 128
Query: 490 VTGAGDETLRFLE 528
+G D ++ +
Sbjct: 129 ASGGLDGVVQIFD 141
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L VL G + ++W P G + +G D L++W+ + + +S H V ++
Sbjct: 147 LKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFT 206
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
P L+ +G A + WN T + + I
Sbjct: 207 P-DGKLICTGSDDASLIV--WNPKTCESIHI 234
Score = 34.3 bits (75), Expect = 0.096
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSP--DGQSLA-SGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
+++GH GL SLA SG D + + ++ + V + ++H +V+ + +S
Sbjct: 234 IVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFS 293
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLDSRLLTEPDTGVE 401
P + + G D+ + W+ S P I + G V +L IG L T G
Sbjct: 294 PSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEG-VTSLTWIGTSKYLATGCANGT- 351
Query: 402 ISVVDA 419
+S+ D+
Sbjct: 352 VSIWDS 357
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
R + H + V L W + LA+G + + +W + V TY H AV+AI+ S
Sbjct: 322 RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVS 379
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 51 VLQGHRQEV-CGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
+ GH V CG ++PDG+ + +G +D L VW+ + + H + +
Sbjct: 192 MFSGHNLNVTCG-DFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDI 250
Query: 228 QHGLLASGGGTADRCIRFWNTLTSQ 302
+ G+ D + N +T +
Sbjct: 251 NSNSSLAISGSKDGSVHIVNIVTGK 275
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/90 (23%), Positives = 43/90 (47%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
P + + +L+GH V +++ DG + G D + +W+ H ++TY +H V+ +
Sbjct: 7 PTKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDV 66
Query: 213 AWSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
+ + GG DR + +W+ T +
Sbjct: 67 HVTSDNAKFCSCGG---DRQVYYWDVSTGR 93
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L + + H +EV + + D S G D +++ W + + ++ + H V A+ ++
Sbjct: 52 LIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Query: 222 PHQHGLLASGGGTADRCIRFWN--TLTSQPMQISSVQLGLV 338
++++G DR +R W+ + + +P+QI L V
Sbjct: 112 DSSSVVVSAG---FDRSLRVWDCRSHSVEPVQIIDTFLDTV 149
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++S + + + +C +S DG+ LAS G+D K+F+W+M + T H + + +
Sbjct: 500 EVSCIRKSASKVIC-CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRF 558
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
P+ L S + D+ I+ W+
Sbjct: 559 RPNSTQLATS---SFDKTIKIWD 578
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH V + WSP+G+ +AS D + +WS+ S + S ++ + P
Sbjct: 670 IFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSY 728
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQIS 317
LL GG A I WNT+ ++ M ++
Sbjct: 729 PDLLVIGGYQA---IELWNTMENKCMTVA 754
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++S + + + +C +S DG+ LAS G+D K+F+W+M + T H + + +
Sbjct: 502 EVSCIRKSASKVIC-CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRF 560
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
P+ L S + D+ I+ W+
Sbjct: 561 RPNSTQLATS---SFDKTIKIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH V + WSP+G+ +AS D + +WS+ S + S ++ + P
Sbjct: 672 IFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSY 730
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQIS 317
LL GG A I WNT+ ++ M ++
Sbjct: 731 PDLLVIGGYQA---IELWNTMENKCMTVA 756
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++S + + + +C +S DG+ LAS G+D K+F+W+M + T H + + +
Sbjct: 502 EVSCIRKSASKVIC-CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRF 560
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
P+ L S + D+ I+ W+
Sbjct: 561 RPNSTQLATS---SFDKTIKIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH V + WSP+G+ +AS D + +WS+ S + S ++ + P
Sbjct: 672 IFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSY 730
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQIS 317
LL GG A I WNT+ ++ M ++
Sbjct: 731 PDLLVIGGYQA---IELWNTMENKCMTVA 756
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++S + + + +C +S DG+ LAS G+D K+F+W+M + T H + + +
Sbjct: 502 EVSCIRKSASKVIC-CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRF 560
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
P+ L S + D+ I+ W+
Sbjct: 561 RPNSTQLATS---SFDKTIKIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH V + WSP+G+ +AS D + +WS+ S + S ++ + P
Sbjct: 672 IFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSY 730
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQIS 317
LL GG A I WNT+ ++ M ++
Sbjct: 731 PDLLVIGGYQA---IELWNTMENKCMTVA 756
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
++S + + + +C +S DG+ LAS G+D K+F+W+M + T H + + +
Sbjct: 502 EVSCIRKSASKVIC-CSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRF 560
Query: 219 SPHQHGLLASGGGTADRCIRFWN 287
P+ L S + D+ I+ W+
Sbjct: 561 RPNSTQLATS---SFDKTIKIWD 580
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/89 (28%), Positives = 43/89 (48%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH V + WSP+G+ +AS D + +WS+ S + S ++ + P
Sbjct: 672 IFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSY 730
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPMQIS 317
LL GG A I WNT+ ++ M ++
Sbjct: 731 PDLLVIGGYQA---IELWNTMENKCMTVA 756
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R L GH V + S DGQ SG D +L +W + + + + H V ++A+S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 228 QHGLLASGGGTADRCIRFWNTL 293
++++ + DR I+ WNTL
Sbjct: 117 NRQIVSA---SRDRTIKLWNTL 135
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/70 (30%), Positives = 37/70 (52%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+L L GH V + SPDG ASGG D + +W + + + A+ + + A+ +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCF 243
Query: 219 SPHQHGLLAS 248
SP+++ L A+
Sbjct: 244 SPNRYWLCAA 253
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 427 KLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+LTGHS+ V + LS DG+ ++G+ D LR
Sbjct: 58 RLTGHSHFVEDVVLSSDGQFALSGSWDGELR 88
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGD 507
+ VW + + L GH+ V +A+SPDG +G D
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 84 LKWSPDGQSLASGGNDNKLFVWSM 155
L WS DG +L SG D + VW +
Sbjct: 301 LNWSADGSTLFSGYTDGVIRVWGI 324
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/82 (29%), Positives = 35/82 (42%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH ++ L S + +AS ND + VW + PV H AV AIA+SP
Sbjct: 284 RGHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGS 343
Query: 237 LLASGGGTADRCIRFWNTLTSQ 302
+ D R W+ +Q
Sbjct: 344 PYQLLSSSDDGTCRIWDARGAQ 365
Score = 34.3 bits (75), Expect = 0.096
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GHR V G+ + +G +D + VWSM + + + H + +A S + +
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN-N 299
Query: 234 GLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL---QRIGLDSRLLTEPDTG 395
+AS D IR W P+ + G V + R G +LL+ D G
Sbjct: 300 IFIASASN--DCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDG 354
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +3
Query: 84 LKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTA 263
+ WS D + + + D ++ VW+ S V + + H A+ + P + S G
Sbjct: 550 IAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGYDG 609
Query: 264 DRCIRFWNTLTSQPMQISSV 323
+ W+ P+QI +
Sbjct: 610 KTIV--WDIWEGIPIQIYDI 627
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMH--STSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTAD 266
SPDG+ + SG +D ++W ++ P+ H V A+ WSP + G +A+ + D
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVAT--ASDD 403
Query: 267 RCIRFWN 287
+R WN
Sbjct: 404 FTVRLWN 410
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/75 (22%), Positives = 26/75 (34%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H + + W L + D + VW + H VK++ P LL
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 243 ASGGGTADRCIRFWN 287
S G+ D C W+
Sbjct: 187 VS--GSRDGCFALWD 199
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GHR +V L + G+ L S D L VW + + +Q S H + V ++ P +
Sbjct: 144 LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEER 203
Query: 234 GLLASGGGTADRCIRFW 284
++ G+AD+ +RF+
Sbjct: 204 YVVT---GSADQELRFY 217
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/78 (25%), Positives = 38/78 (48%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH+ V + S DG+ + +G D L +W + ++ AH +V + + + H
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 234 GLLASGGGTADRCIRFWN 287
L + G DR +++W+
Sbjct: 638 YLFSIG---KDRLVKYWD 652
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H+ V L+++ G LASG DN + +W + S + H V + + L+
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 243 ASGGGTADRCIRFWNTLTSQPMQISS 320
+S + D+ +R W+ T MQI S
Sbjct: 165 SS---SKDKFLRVWDLETQHCMQIVS 187
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQIL-VWKYPSLTQVAKLTGHSYRVLYLALSPDGEA 486
R QV +L + +LVS+ S+++ L VW + + ++GH V + P+
Sbjct: 148 RDQVTDLVFLDGGKKLVSS---SKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERY 204
Query: 487 IVTGAGDETLRF 522
+VTG+ D+ LRF
Sbjct: 205 VVTGSADQELRF 216
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+ V+ SL L GH V+ + +S DGE IVTG+ D+ L+
Sbjct: 564 VKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLK 607
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+ V L ++K S L S G N I++W + + +L GH +V L G+ +
Sbjct: 106 KGAVTALRYNKVGSMLAS--GSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKL 163
Query: 490 VTGAGDETLRFLECFFQNAL 549
V+ + D+ LR + Q+ +
Sbjct: 164 VSSSKDKFLRVWDLETQHCM 183
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 397 WKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
W + L GH + LA+S G+ +VTG+ D ++R
Sbjct: 651 WDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMR 691
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H V G+K+ + L S G D + W + T H A + +A S L+
Sbjct: 623 HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLV 682
Query: 243 ASGGGTADRCIRFWN 287
G+ DR +R W+
Sbjct: 683 T---GSHDRSMRRWD 694
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH-----STSPVQTYSAHVAAVKAIA 215
VL+GH EV + W+ G LA+ G D +++W + + + H VK +
Sbjct: 87 VLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVL 146
Query: 216 WSPHQHGLLASGGGTADRCIRFW 284
W P L + + D I+ W
Sbjct: 147 WHPTMDVLFSC---SYDNTIKIW 166
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
+ GH V + SPDG ++A+G +D + +W + + +QT S H V ++A+ P
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 37.9 bits (84), Expect = 0.008
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
+L L+GH V L +SP D + L SG +D + + + + + S H + V ++
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVD 250
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLTSQPMQISS 320
SP G +A+ G++DR +R W+ +Q S
Sbjct: 251 ASP-DGGAIAT--GSSDRTVRLWDLKMRAAIQTMS 282
Score = 36.3 bits (80), Expect = 0.024
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +1
Query: 415 TQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLECFFQNAL 549
T + ++GH+ VL + SPDG AI TG+ D T+R + + A+
Sbjct: 234 TLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAI 278
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASG 251
V + WSP+G+ LA G D + V+ + + + H V+++ +SP +L SG
Sbjct: 161 VLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSG 219
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
+ L R GH V L P G AS D+ + V+ + + + + A + V +
Sbjct: 50 LDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQ 109
Query: 216 WSPHQHGLLASGGGTADRCIRFWNT 290
+ P L +GG +A ++ W+T
Sbjct: 110 FEPKGTILAVAGGSSAS--VKLWDT 132
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/91 (29%), Positives = 41/91 (45%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L L GH ++V GL S + S G+D ++ W + +++Y H++ V +A
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
P LL G D R W+ T MQI
Sbjct: 270 PTLDVLLTGG---RDSVCRVWDIRTK--MQI 295
Score = 37.1 bits (82), Expect = 0.014
Identities = 20/80 (25%), Positives = 40/80 (50%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
RV+QGH V + + P + +G D + +W + + T + H+ V+ +A S +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVS-N 228
Query: 228 QHGLLASGGGTADRCIRFWN 287
+H + S G D+ ++ W+
Sbjct: 229 RHTYMFSAGD--DKQVKCWD 246
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L GH VC + P + +G +D + W + + T + H +V+A+ P ++
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKEN 357
Query: 234 GLLASGGGTADRCIRF 281
A +AD +F
Sbjct: 358 ---AFASASADNTKKF 370
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R GH V L P L +GG D+ VW + + + S H V ++ P
Sbjct: 254 RSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPT 313
Query: 228 QHGLLASGGGTADRCIRFWN 287
++ G+ D I+FW+
Sbjct: 314 DPQVVT---GSHDTTIKFWD 330
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 394 VWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRF 522
VW + Q+ L+GH V + P +VTG+ D T++F
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKF 328
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = +3
Query: 9 PAGTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHS-----TSPV 173
PA TP + S+ L H + V +K+S DG+ LAS D + +++++ PV
Sbjct: 6 PATASFTPYVH-SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPV 64
Query: 174 QTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLT 296
Q ++ H + +A+S ++++ + D+ ++ W+ T
Sbjct: 65 QEFTGHENGISDVAFSSDARFIVSA---SDDKTLKLWDVET 102
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/85 (22%), Positives = 42/85 (49%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GH + + +S D + + S +D L +W + + S ++T H + ++P Q +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP-QSNM 127
Query: 240 LASGGGTADRCIRFWNTLTSQPMQI 314
+ S G+ D +R W+ T + +++
Sbjct: 128 IVS--GSFDETVRIWDVTTGKCLKV 150
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +3
Query: 84 LKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI--AWSPHQHGLLASGGG 257
+++SP+G+ + G DN L +W++ S ++TY+ HV A I A+S + S G
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS--G 261
Query: 258 TADRCIRFWNTLTSQPMQ 311
+ D C+ W + + +Q
Sbjct: 262 SEDNCVHMWELNSKKLLQ 279
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
+G+ + SG DN + +W ++S +Q H V +A P ++ L+AS G+ D+ +R
Sbjct: 254 NGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTEN-LIAS--GSLDKTVR 310
Query: 279 FW 284
W
Sbjct: 311 IW 312
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G N + +W+ S + KL GH+ V+ +A P I +G+ D+T+R
Sbjct: 261 GSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT-YSAHVAAVKAIAWSP 224
+VL H V + ++ DG + S D +W + V+T V + +SP
Sbjct: 149 KVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 225 HQHGLLASGGGTADRCIRFWN 287
+ +L GT D +R WN
Sbjct: 209 NGKFILV---GTLDNTLRLWN 226
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
+ ++A+S + +VS + +W + + + L GH+ + +P IV+G
Sbjct: 74 ISDVAFSSDARFIVSAS--DDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Query: 499 AGDETLR 519
+ DET+R
Sbjct: 132 SFDETVR 138
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/85 (22%), Positives = 37/85 (43%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L + L GH + ++P + SG D + +W + + ++ AH V A+ ++
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 222 PHQHGLLASGGGTADRCIRFWNTLT 296
L+ S + D R W++ T
Sbjct: 165 -RDGSLIVS--SSYDGLCRIWDSGT 186
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 41.1 bits (92), Expect = 8e-04
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHST------SPVQTYSAHVAAVKAI 212
L+GH E GL WS Q L SG +D ++ +W +++T Q + AH V+ +
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 213 AWSPHQHGLLASGGGTADRCIRFWNTLT---SQPMQ 311
AW L S G D+ + W+ + S+P+Q
Sbjct: 234 AWHLRHEYLFGSVGD--DQYLLIWDLRSPSASKPVQ 267
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMHSTS---PVQTYSAHVAAV 203
+ ++ + H V + W + L S G+D L +W + S S PVQ+ AH V
Sbjct: 217 LDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEV 276
Query: 204 KAIAWSPHQHGLLASGGGTADRCIRFWN 287
+A++P ++A+ G+ D+ ++ ++
Sbjct: 277 NCLAFNPFNEWVVAT--GSTDKTVKLFD 302
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSMHSTSP-VQTYSAHVAAVKAIAWSPHQHG 236
H EV L ++P + +A+G D + ++ + S + T+ +H V + W+P
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 237 LLAS 248
+LAS
Sbjct: 332 ILAS 335
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
H + V GL W+ + ++ LAS D K+ VW + + + T H V+A+AW+ + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 240 LASG 251
L SG
Sbjct: 324 LLSG 327
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSP--VQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFW 284
LA+G D + +W + + P + T+ + AV +I+++ LLA GG + + W
Sbjct: 420 LATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGE--LHVW 477
Query: 285 NTL 293
+TL
Sbjct: 478 DTL 480
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPD--GQSLASGGNDNKLFVW---SMHSTSPVQTYSAHVAAVKAIAW 218
L GHR V + W+ G LAS D ++ +W + + + ++ H +V +IAW
Sbjct: 52 LTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAW 111
Query: 219 SPHQHGL-LASG 251
+PH+ GL LA G
Sbjct: 112 APHELGLSLACG 123
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
+V H Q V W DG ++ +GG D + +W + S + T + H A IAW P
Sbjct: 67 KVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPG 126
Query: 228 QHGLLASG 251
+ LL +G
Sbjct: 127 MN-LLVTG 133
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQS-LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
H + V GL W+ + ++ LAS D K+ VW + + + T H V+A+AW+ + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 240 LASG 251
L SG
Sbjct: 292 LLSG 295
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSL-ASGGNDNKLFVWSMHSTSP--VQTYSAHVAAVKAIA 215
S + GH + + ++ +L A+G D + +W + + P + T++ + + IA
Sbjct: 362 SFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA 421
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLT 296
+SP LLA GG + ++ W+TL+
Sbjct: 422 FSPDNPFLLAMGGVMGE--LKLWDTLS 446
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS--PVQTYSAHVAAVKAIAWSP 224
VLQ H Q V G+ WS + + +D +VWS+ P A + WSP
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 225 HQHGLLASGGGTADRCIRFW 284
++ A G G CI ++
Sbjct: 110 KEN-KFAVGSGAKTVCICYY 128
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS--PVQTYSAHVAAVKAIAWSP 224
VLQ H Q V G+ WS + + +D +VWS+ P A + WSP
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 225 HQHGLLASGGGTADRCIRFW 284
++ A G G CI ++
Sbjct: 110 KEN-KFAVGSGAKTVCICYY 128
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS--PVQTYSAHVAAVKAIAWSP 224
VLQ H Q V G+ WS + + +D +VWS+ P A + WSP
Sbjct: 50 VLQKHDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSP 109
Query: 225 HQHGLLASGGGTADRCIRFW 284
++ A G G CI ++
Sbjct: 110 KEN-KFAVGSGAKTVCICYY 128
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWSPH 227
VL+ HR + +++SPD ASG + + VW + + H A + ++AWSP+
Sbjct: 351 VLEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPN 410
Query: 228 QHGLLASGGGTADRCI 275
+ ++A+ G+ D C+
Sbjct: 411 -NKMVAT--GSIDTCV 423
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +3
Query: 21 RXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH--STSPVQTYSAHV 194
R T ++L+ +L H + L WSP+ + +A+G D + V+ + ++S + +AH+
Sbjct: 385 RETKQVKLNNMLF-HTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHL 443
Query: 195 AAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
V A+A+ +AS G D +R W+
Sbjct: 444 GGVNAVAFI--DDCTVASSG--EDASVRLWH 470
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPV---QTYSAHVAA 200
PP + + H V +++SPDG + +D K ++ + V + H +
Sbjct: 39 PPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGS 98
Query: 201 VKAIAWSPHQHGLLASGGGTADRCIRFW 284
+ A++WSP +L +AD+ + W
Sbjct: 99 IYAVSWSPDSKRVLTV---SADKSAKVW 123
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQ---TYSAHVAAVKAIAWSPHQHGLLASGGGTA 263
SPDG+ GG D KL ++S+ + ++ H A+ I +SP L G A
Sbjct: 320 SPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSP---DLTMFASGDA 376
Query: 264 DRCIRFWNTLTSQ 302
+R W+ T Q
Sbjct: 377 NREAVVWDRETKQ 389
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +3
Query: 78 CGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGG 257
C + +SPDG+ + SG + K + W S +T H W P + +A+ G
Sbjct: 506 CQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGW 565
Query: 258 TADRCIRFWN 287
D I++W+
Sbjct: 566 --DGLIKYWD 573
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVA--AVKAIAWS 221
R GH + V + +S DG + G D + W + + T+S VK
Sbjct: 320 RTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDD 379
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLDSRLLTEPD 389
Q+ LLA G +D+ I W+ T + Q LG V T+ + + R +T D
Sbjct: 380 DKQNILLA---GMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSD 432
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAWSPH- 227
L+GH+ V L W+ +G L SG +D ++ +W+ S + + + H A + + P
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 228 QHGLLASGGGTADRCIRFWNT 290
L+ SG G A+ +R +NT
Sbjct: 106 SDELVVSGAGDAE--VRLFNT 124
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +3
Query: 102 GQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRF 281
G+ +ASG +D + F+W + ++ + + I P + SG D I+
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSG---IDNTIKI 689
Query: 282 WNTLTSQPMQISSVQLG 332
W+ S P ++ G
Sbjct: 690 WSPTASVPSIVAGGSAG 706
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
+Q H V + + P+G +A+ G + K+ +W + VQT H K +++S Q
Sbjct: 277 MQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQT--IHSFHAKTLSFS--QK 332
Query: 234 GLLASGGGT 260
GLLA+G G+
Sbjct: 333 GLLAAGTGS 341
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
L+GH + + ++ D +L +G +D VWS+ S + H V+++ +SP
Sbjct: 1018 LKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDK 1075
Query: 234 GLLASGGGTADRCIRFW 284
G++ G+AD +RFW
Sbjct: 1076 GIIT---GSADGLLRFW 1089
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+Q H + +K+SPDG+ LAS G D L VWS+
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+Q H + +K+SPDG+ LAS G D L VWS+
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRC 272
SPDG+ LA G++ + + ++ ++T S H+ A AW H G+ S G D+
Sbjct: 286 SPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAW--HPDGVTFS-TGNQDKT 342
Query: 273 IRFWNTLT-SQPMQISSVQLGLVETLQRIGLDSR--LLTEPDTGVEISVVDAGCETDR 437
R W+ SQ + + LG + ++ R D + + EP V + V G ET++
Sbjct: 343 CRVWDIRNLSQSVTVLKGNLGAIRSI-RYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 399
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWS 221
L GH W PDG + ++G D VW + + S V ++ A+++I ++
Sbjct: 315 LSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYT 371
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPD--GQSLASGGNDNKLFVW---SMHSTSPVQTYSAHVAAVKAIAW 218
L GHR V + W+ G LAS D ++ +W + + + ++ H ++V +IAW
Sbjct: 52 LTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAW 111
Query: 219 SPHQHGL-LASG 251
+PH GL LA G
Sbjct: 112 APHDIGLSLACG 123
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTS-PVQTYSA---HVAAVKAIAWSPHQHGLLAS--GGGTADRC 272
LASGG DN + VW + + S + + A H V+ +AW+P+ GL S G+ D
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNL-GLPKSTIASGSQDGK 237
Query: 273 IRFW 284
+ W
Sbjct: 238 VIIW 241
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHST--SPVQTYSAHVAAVKAIAWSPHQHG 236
H + V WSP GQ LA+ D +W + + + T H VK+++W+
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 237 LLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRI 356
L + D+ + W L ++V G + ++ +
Sbjct: 133 LATC---SRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV 169
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM---HSTSPVQTYSAHVAAVKAIAWSP 224
L+GH EV + W+ G LA+ D +++W + + + H VK + W P
Sbjct: 114 LEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP 173
Query: 225 HQHGLLASGGGTADRCIRFW 284
L + + D I+ W
Sbjct: 174 TMDVLFSC---SYDNTIKVW 190
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVW 149
VL GH Q+V ++W P L S DN + VW
Sbjct: 158 VLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLAS 248
++PDG+ + SG D L W++ + S V + ++ V + W+P + +A+
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAA 304
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
++ R +GH+ V L SP S SG D + +W +
Sbjct: 105 RILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWSPH 227
VL+ HR + +++SPD AS + + VW S ++ H A + +AWSP+
Sbjct: 486 VLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPN 545
Query: 228 QHGLLASGGGTADRCIRFW--NTLTSQPMQISSVQLG 332
++A+ G+ D C+ + + S M I LG
Sbjct: 546 S-TMVAT--GSLDTCVIVYEVDKPASSRMTIKGAHLG 579
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/89 (20%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVW---SMHSTSPVQTYSAHVAA 200
PP + + H V ++++PDG + +D K ++ + + + H +
Sbjct: 175 PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGS 234
Query: 201 VKAIAWSPHQHGLLASGGGTADRCIRFWN 287
+ A++WSP +L +AD+ + W+
Sbjct: 235 IYAVSWSPDGKQVLTV---SADKSAKIWD 260
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQ--TYSAHVAAVKAIAWSP 224
V L +PDG GG D KL ++S++ S + H A+ I +SP
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSP 501
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/83 (20%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT-YSAHVAAVKA 209
P+++S + H ++SP+G+ +ASG + +W ++ ++ + +
Sbjct: 46 PLKVS-IYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDD 104
Query: 210 IAWSPHQHGLLASGGGTADRCIR 278
+ WS ++ASG G +R
Sbjct: 105 LQWSADGMRIVASGDGKGKSLVR 127
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 316 QVCNLAWSKHSSELVST-HGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGE-AI 489
++ +L WS +V++ G ++ + + + S + V + GHS RVL A+ P I
Sbjct: 101 RIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRI 160
Query: 490 VTGAGDETLRFLE 528
VT D + F E
Sbjct: 161 VTCGEDFLVNFYE 173
Score = 29.9 bits (64), Expect = 2.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
GH+ + + WSPDG+ + + D +W +
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GH++ + L + D +G +D +W M + + ++TY+ V V A+A SP + +
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHV 276
Query: 240 LASGGGTA 263
+ GG A
Sbjct: 277 VLGGGQDA 284
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+++GH + + L+++ +G L S D+ VW + + TY H AV S
Sbjct: 32 LMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDS 91
Query: 231 HGLLASGGGTADRCIRFWNTLTSQPM 308
L+ G+AD+ + W+ + + +
Sbjct: 92 SRLIT---GSADQTAKLWDVKSGKEL 114
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGND 131
++GH + L +SPDG+S +SGG D
Sbjct: 313 VKGHFGPINALAFSPDGKSFSSGGED 338
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRF 522
HS ++++T G +L + PS ++ LTGHS +V + D + ++T + D+T+R
Sbjct: 232 HSKDVIATGGIDTTAVL-FDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRI 290
Query: 523 LEC 531
C
Sbjct: 291 WGC 293
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGD 507
H L+ G +Q+ + +W S VAK GH+ + ++ S +G + T A D
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADR 269
+S DG++LAS D+ + + + + ++ + H + + PH ++AS G+ D
Sbjct: 114 FSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVAS--GSLDL 171
Query: 270 CIRFWNTLTSQ 302
+R WNT TS+
Sbjct: 172 EVRLWNTTTSE 182
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 69 QEVCGLKWSPDGQSLASGGNDNKLF-VWSMHSTSPVQTYSAHVAAVKAIAWSP-HQHGLL 242
+++ L WSP G+ LAS D+ F +W + S + + + WSP +
Sbjct: 213 EQISALSWSPCGRYLASASYDSSSFTIWDV-SQGAGTPIRRGLGGISMLKWSPTGDYFFA 271
Query: 243 ASGGGTADRCIRFWNTLTSQPMQISS 320
A GT C+ NT TS+P +SS
Sbjct: 272 ARFDGTF--CLWETNTWTSEPWSLSS 295
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 38.3 bits (85), Expect = 0.006
Identities = 13/59 (22%), Positives = 31/59 (52%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
H + +C L W+P+G+ +A+ G D ++ +W + + + + ++W P+ + L
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHKFE-ERICCMSWKPNGNAL 294
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHS 161
RVL+GH+ V GL + P+G+ LAS + W + +
Sbjct: 140 RVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQN 177
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 87 KWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSA-HVAAVKAIAWSPHQHGLLASGGGTA 263
+WSPDG++LA G N + ++ + + H+ A+ + W+P+ + SG
Sbjct: 202 RWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSG---L 258
Query: 264 DRCIRFWN 287
D+ + W+
Sbjct: 259 DKQVLLWD 266
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
RVLQGH V + + P + +G D + +W + + T + H+ V+ +A S +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVS-N 222
Query: 228 QHGLLASGGGTADRCIRFWN 287
+H + S G D+ ++ W+
Sbjct: 223 RHTYMFSAGD--DKQVKCWD 240
Score = 37.5 bits (83), Expect = 0.010
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L L GH +V GL S + S G+D ++ W + +++Y H+ V +A
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 222 PHQHGLLASGGGTADRCIRFWNTLTSQPMQI 314
P +L G D R W+ T MQI
Sbjct: 264 PTLDVVLTGG---RDSVCRVWDIRTK--MQI 289
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/68 (27%), Positives = 27/68 (39%)
Frame = +1
Query: 316 QVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVT 495
QV LA S + + S Q+ W + GH + V LAL P + ++T
Sbjct: 214 QVRGLAVSNRHTYMFSAG--DDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLT 271
Query: 496 GAGDETLR 519
G D R
Sbjct: 272 GGRDSVCR 279
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVW 149
+ GH+ ++ LK+SPDG+ LA+GG D + +W
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 34.3 bits (75), Expect = 0.096
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +1
Query: 340 KHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
K S E +S N+ + + V K+ GH ++ L SPDG+ + TG D ++
Sbjct: 164 KSSEETMSKVKVKTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVK 223
Query: 520 FLECFFQNALTQGEQERPKPIHR 588
++L + +PI++
Sbjct: 224 IWRITLSDSLLASFLRQQEPINQ 246
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
S L+GH V L G+ SG +D+ + +W + + TY+ H +V A+A +P
Sbjct: 248 SMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNP 307
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQ 302
+ SGG D+C+ + T +
Sbjct: 308 -SFSHVYSGG--RDQCLYLTDLATRE 330
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH++ V L + G L SGG + L VW + S H V+ +
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 231 HGLLASGGGTADRCIRFWN 287
L+ G++D IR W+
Sbjct: 268 RFCLS---GSSDSMIRLWD 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+ V LA + + LVS G ++ + VW + ++ KL GH+ V L L G
Sbjct: 213 KESVYALAMNDTGTMLVS--GGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 490 VTGAGDETLRFLECFFQNAL 549
++G+ D +R + Q L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCL 290
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
S L+GH V L G+ SG +D+ + +W + + TY+ H +V A+A +P
Sbjct: 248 SMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNP 307
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQ 302
+ SGG D+C+ + T +
Sbjct: 308 -SFSHVYSGG--RDQCLYLTDLATRE 330
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/79 (26%), Positives = 34/79 (43%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQ 230
+ +GH++ V L + G L SGG + L VW + S H V+ +
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTG 267
Query: 231 HGLLASGGGTADRCIRFWN 287
L+ G++D IR W+
Sbjct: 268 RFCLS---GSSDSMIRLWD 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = +1
Query: 310 RSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAI 489
+ V LA + + LVS G ++ + VW + ++ KL GH+ V L L G
Sbjct: 213 KESVYALAMNDTGTMLVS--GGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 490 VTGAGDETLRFLECFFQNAL 549
++G+ D +R + Q L
Sbjct: 271 LSGSSDSMIRLWDLGQQRCL 290
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQH 233
LQGH + V +++ DG ++ + G D L +WS+ ++TY HV + S ++
Sbjct: 109 LQGHTKTVSYVRFL-DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRN 167
Query: 234 GLLASGGGTADR 269
G L G +R
Sbjct: 168 GALFGCGSENNR 179
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIA 215
+L +VL GH++ V +S DG+ L + +D +WSM + V+ Y H A A
Sbjct: 244 KLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDN-KLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
R +Q V L+ +PD LA+ N + +LF + +S PV TY +H V A+ +
Sbjct: 29 RTIQYPDSHVNRLEITPDKHYLAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQC 88
Query: 225 HQHGLLASGGGTADRCIRFWN 287
+ + G+ D ++ W+
Sbjct: 89 DAKWMYS---GSEDGTVKIWD 106
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 376 SQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
S + +W LTGH V S DGE +VT + D T R
Sbjct: 231 SDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTAR 278
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAH 191
+L +VL GH + V +S DG+ L + +D +WSM + Y AH
Sbjct: 250 KLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 20/48 (41%)
Frame = +1
Query: 376 SQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
S + +W LTGH V S DGE +VT + D T R
Sbjct: 237 SDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTAR 284
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA-VKAIAW 218
L L+ H+ V L + DG L SG D + VW TS + KAI
Sbjct: 272 LVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILS 331
Query: 219 SPHQHGLLASGGGTADRCIRFW 284
+ LL S G+ADR +R W
Sbjct: 332 LFNVSDLLLS--GSADRTVRIW 351
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 370 GYSQNQILVWKYPS----LTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
G + +I VW P+ T VA L H V LAL+ DG + +G+ D ++
Sbjct: 252 GSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSI 304
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGG 257
WS DG+ L +GG D+ + VWSM V H + V +A+ + + G G
Sbjct: 353 WSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSG 408
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
HS ++++T G +L + PS ++ LTGHS +V + D + ++T + D+T+R
Sbjct: 232 HSKDVIATGGVDATAVL-FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVR 289
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGD 507
H L+ G SQ+ + +W S VAK GH+ V ++ S +G + T A D
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 96 PDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCI 275
PDG L +G + + + +W + S + V + H V AI++S + + L + A+ +
Sbjct: 363 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATA----AEDGV 418
Query: 276 RFWN 287
R W+
Sbjct: 419 RLWD 422
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 37.1 bits (82), Expect = 0.014
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
HS ++++T G +L + PS ++ LTGHS +V + D + ++T + D+T+R
Sbjct: 232 HSKDVIATGGVDATAVL-FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVR 289
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGD 507
H L+ G SQ+ + +W S VAK GH+ V ++ S +G + T A D
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +3
Query: 96 PDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCI 275
PDG L +G + + + +W + S + V + H V AI++S + + L + A+ +
Sbjct: 363 PDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATA----AEDGV 418
Query: 276 RFWN 287
R W+
Sbjct: 419 RLWD 422
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 36.7 bits (81), Expect = 0.018
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH EV + WS D L S D + +W + S + + AH + V ++ ++P
Sbjct: 325 RGHTGEVLDISWSKDNY-LLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNEN 382
Query: 237 LLASGGGTADRCIRFWN 287
S G+ D +R WN
Sbjct: 383 YFMS--GSIDGKVRIWN 397
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
S+ ++ H + +K+S DG+ LAS G D + VW +
Sbjct: 214 SQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 36.7 bits (81), Expect = 0.018
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAA--V 203
PP VL+GHR V + + P L +G D +L +W V + AH A V
Sbjct: 5 PPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGV 64
Query: 204 KAIAWSP 224
A+A SP
Sbjct: 65 LAVAASP 71
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 400 KYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLECFFQNALT 552
K P VA L GH + V+ ++ P + TG+ D LR + A++
Sbjct: 3 KRPPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVS 53
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 66 RQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
R V G DG+ A+ G D+++ V++ + + H A A+++SP L+A
Sbjct: 308 RPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCE-LMA 366
Query: 246 SGGGTADRCIRFW 284
S + D + W
Sbjct: 367 S--ASEDATVALW 377
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H V + +S D + LASG D K+ +W + + ++ + AH V ++++S LL
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 243 AS 248
++
Sbjct: 322 ST 323
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +1
Query: 349 SELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
SE++++ G +I +W+ + + + HS V L+ S DG +++ + D+T R
Sbjct: 275 SEMLAS-GSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/88 (20%), Positives = 38/88 (43%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPH 227
R H Q V L +S DG L S D + + S ++ + H + V ++
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD 358
Query: 228 QHGLLASGGGTADRCIRFWNTLTSQPMQ 311
++ + ++D ++ W++ T+ +Q
Sbjct: 359 GSRIITA---SSDCTVKVWDSKTTDCLQ 383
Score = 28.7 bits (61), Expect = 4.7
Identities = 24/101 (23%), Positives = 45/101 (44%)
Frame = +1
Query: 319 VCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTG 498
V +L++S+ S+L+ST +I K L + + GH+ V + + DG I+T
Sbjct: 308 VTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLK--EFRGHTSYVNHAIFTSDGSRIITA 365
Query: 499 AGDETLRFLECFFQNALTQGEQERPKPIHRTQINEIRTYIK 621
+ D T++ + + L + P +N I + K
Sbjct: 366 SSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSIHLFPK 406
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 36.3 bits (80), Expect = 0.024
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHST------SPVQTYSAHVAAVK 206
+V + H ++ + W+P D + +G DN + V+ + SPV + H AAV
Sbjct: 320 KVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVL 379
Query: 207 AIAWSPHQHGLLASGGGTADRCIRFWN 287
+ WSP + + G D + W+
Sbjct: 380 CVQWSPDKSSVF--GSSAEDGLLNIWD 404
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 334 WSKHSSELVSTHGYSQNQILVWKYPSLTQ------VAKLTGHSYRVLYLALSPDGEAIV- 492
W+ H + L+ T G + N + V+ +LT V K GH VL + SPD ++
Sbjct: 334 WNPHDNNLILT-GSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFG 392
Query: 493 TGAGDETLRFLEC 531
+ A D L +C
Sbjct: 393 SSAEDGLLNIWDC 405
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
I +W + S T V+ LTGH++ V+ + P + +V+ + D+T+R
Sbjct: 117 IRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS--PVQTYSAHVAAVKAIAWSP 224
VL+GH + V + P + SG +D ++ +W M+ T V T H+ V ++ +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQPMQ 311
Q ++++ + D+ IR W+ +Q
Sbjct: 259 KQDIIVSN---SEDKSIRVWDATKRTGLQ 284
Score = 33.1 bits (72), Expect = 0.22
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H V G+ + SGG+D K+ VW+ + + T H+ ++ + + H++ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFH-HEYPWI 108
Query: 243 ASGGGTADRCIRFWN 287
S + D+ IR WN
Sbjct: 109 VS--ASDDQTIRIWN 121
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
G+ + +K+S DG+ + +G +D+ ++V+ + + AH + V + ++ L
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 240 LASGGGTADRCIRFWN 287
+ S G+ D + W+
Sbjct: 287 ILS--GSDDNLCKVWD 300
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 117 SGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLAS 248
+G ND+ ++++ + S V H + V+ W P+ L++S
Sbjct: 418 TGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISS 461
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGG 257
WS DG+ + +GG D+ + VWSM V H + V +A+ + + G G
Sbjct: 353 WSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDGSG 408
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
I +W + S T ++ LTGH++ V+ + P + +V+ + D+T+R
Sbjct: 117 IRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS--PVQTYSAHVAAVKAIAWSP 224
VL+GH + V + P + SG +D ++ +W M+ T V T H+ V ++ +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHA 258
Query: 225 HQHGLLASGGGTADRCIRFWN 287
Q ++++ + D+ IR W+
Sbjct: 259 KQDIIVSN---SEDKSIRVWD 276
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H V G+ + SGG+D K+ VW+ + + T H+ ++ + + H++ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFH-HENPWI 108
Query: 243 ASGGGTADRCIRFWN 287
S + D+ IR WN
Sbjct: 109 VS--ASDDQTIRIWN 121
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 343 HSSELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
H+S+ + G +I VW Y + + L GH + + + IV+ + D+T+R
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 118
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
D L +G +D+ VW + S VQT H V A+++ P ++ G+ D +R
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIIT---GSEDGTVR 254
Query: 279 FWNTLT 296
W+ T
Sbjct: 255 IWHATT 260
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G + VW Y + + V L GH++ V ++ P+ I+TG+ D T+R
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVR 254
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+++ +GH V + ++P D + AS D + +W++ S P T AH+ V +
Sbjct: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCV 191
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY 182
+ + H + +K+SPDG+ +AS G D + VWS+ TY
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY 256
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH E+ L WS G L S D + +W + ++T++ H V +A++P
Sbjct: 319 KGHIGEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 237 LLASGGGTADRCIRFWNTLTSQPMQISSVQ 326
S G+ D +R W+ + + + ++
Sbjct: 377 YFIS--GSIDGKVRIWDVTRCRVVDYTDIR 404
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY 182
+ + H + +K+SPDG+ +AS G D + VWS+ TY
Sbjct: 210 IDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTY 256
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/90 (23%), Positives = 41/90 (45%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH E+ L WS G L S D + +W + ++T++ H V +A++P
Sbjct: 319 KGHIGEILDLSWSEKGY-LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDN 376
Query: 237 LLASGGGTADRCIRFWNTLTSQPMQISSVQ 326
S G+ D +R W+ + + + ++
Sbjct: 377 YFIS--GSIDGKVRIWDVTRCRVVDYTDIR 404
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.5 bits (78), Expect = 0.041
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
+GH E+ L WS G L S D + +W + S+ +H + V +A++P
Sbjct: 360 RGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDN 418
Query: 237 LLASGGGTADRCIRFWN 287
S G+ D +R W+
Sbjct: 419 YFIS--GSIDGKVRIWD 433
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 35.5 bits (78), Expect = 0.041
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +3
Query: 48 RVLQGHR--QEVCGLKW-SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
+V GHR Q V G+ + P+ + + SG + +F+W V+ V +
Sbjct: 312 QVYIGHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLES 371
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETLQRIGLD--SRLLTEPD 389
PH LLAS G ++ ++ W +++ + + ++ V L R+G + SR+ PD
Sbjct: 372 HPH-IPLLASCG--IEKSVKLWTPMSNDVLSLPE-KIDKVMELNRVGREDQSRVTLTPD 426
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAH 191
L GH V ++++ G L SG +D ++ +W+ S S +Y S H
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGH 97
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
D L +G +D+ VW + S VQT H V A+ + P ++ G+ D +R
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT---GSEDGTVR 254
Query: 279 FWNTLT 296
W+ T
Sbjct: 255 IWHATT 260
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G + VW Y + + V L GH++ V + P+ I+TG+ D T+R
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+++ +GH V + ++P D + AS D + +W++ S P T AH V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
D L +G +D+ VW + S VQT H V A+ + P ++ G+ D +R
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT---GSEDGTVR 254
Query: 279 FWNTLT 296
W+ T
Sbjct: 255 IWHATT 260
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G + VW Y + + V L GH++ V + P+ I+TG+ D T+R
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+++ +GH V + ++P D + AS D + +W++ S P T AH V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
D L +G +D+ VW + S VQT H V A+ + P ++ G+ D +R
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIIT---GSEDGTVR 254
Query: 279 FWNTLT 296
W+ T
Sbjct: 255 IWHATT 260
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G + VW Y + + V L GH++ V + P+ I+TG+ D T+R
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+++ +GH V + ++P D + AS D + +W++ S P T AH V +
Sbjct: 135 TQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 35.5 bits (78), Expect = 0.041
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHG 236
QGH +V L WS Q L S D + +W++ S + ++ +S H V I ++P
Sbjct: 510 QGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDR 567
Query: 237 LLASGGGTADRCIRFWN 287
S G+ D +R W+
Sbjct: 568 YFIS--GSLDAKVRVWS 582
Score = 33.1 bits (72), Expect = 0.22
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 159 STSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
S P ++ HV V +AWS QH LL+S + D+ +R WN L+SQ
Sbjct: 502 SEKPFCSFQGHVDDVLDLAWSKSQH-LLSS---SMDKTVRLWN-LSSQ 544
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+Q H + +K+S DG+ LAS G D + +W +
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQV 442
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GH++++ L + D +G D +W M + + ++TY+ V V A++ SP + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAVSLSPLLNHV 249
Query: 240 LASGGGTA 263
+ GG A
Sbjct: 250 VLGGGQDA 257
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGND 131
++GH + L ++PDG+S +SGG D
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
GH++++ L + D +G D +W M + + ++TY+ V V A++ SP + +
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAVSLSPLLNHV 249
Query: 240 LASGGGTA 263
+ GG A
Sbjct: 250 VLGGGQDA 257
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGND 131
++GH + L ++PDG+S +SGG D
Sbjct: 286 VKGHFGPINALAFNPDGKSFSSGGED 311
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 35.5 bits (78), Expect = 0.041
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
D L +G +D+ VW + S VQT H V A+ + P ++ G+ D +R
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIIT---GSEDGTVR 254
Query: 279 FWNTLT 296
W+ T
Sbjct: 255 IWHATT 260
Score = 34.3 bits (75), Expect = 0.096
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 370 GYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
G + VW Y + + V L GH++ V + P+ I+TG+ D T+R
Sbjct: 205 GSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+++ +GH V + ++P D + AS D + +W++ S P T AH V +
Sbjct: 135 TQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCV 191
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAH----VAAVKAIA 215
R GH +V +K+ PDG +G +D ++ + + +Q Y H V +IA
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 216 WSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
+S G L G ++ W+TL +
Sbjct: 240 FS--VSGRLLFAGYASNNTCYVWDTLLGE 266
Score = 34.3 bits (75), Expect = 0.096
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 72 EVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASG 251
+V L W+P+ + S D +L VW+ ++ A V A+SP+ + G
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGG 64
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTS------PV-QTYSAHVAAVKAIAWSPHQHGLLAS 248
+SP+GQS+A GG D+ ++S+ ST+ PV + + H V + P++ L +
Sbjct: 53 FSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 112
Query: 249 GGGTADRCIRFWNTLT 296
G D+ W+ T
Sbjct: 113 SSG--DQTCILWDVTT 126
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 439 HSYRVLYLALSPDGEAIVTGAGDETLR 519
H R+ L LS DG A+ TG+ D L+
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLK 304
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 35.1 bits (77), Expect = 0.055
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHST------SPVQTYSAHVAA 200
+++V + H ++ + W+P D + +G DN + ++ SP+ + H AA
Sbjct: 329 VTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAA 388
Query: 201 VKAIAWSPHQHGLLASGGGTADRCIRFWN 287
V + WSP + + G D + W+
Sbjct: 389 VLCVQWSPDKSSVF--GSSAEDGLLNIWD 415
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 35.1 bits (77), Expect = 0.055
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVW 149
P++ L GH+ EV ++W G +LAS G+D + +W
Sbjct: 269 PVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRC 272
SPDG+ LA G+ + + HS + + H A AW H +GL+ + G C
Sbjct: 257 SPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAW--HPNGLILATGNQDTAC 314
Query: 273 IRFWNTLT-SQPMQISSVQLGLVETLQ 350
R W+ S+ + +G + L+
Sbjct: 315 -RLWDIRNPSESFAVLKGNMGAIRGLK 340
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWSP 224
L+GH+ W P+G LA+G D +W + + S ++ A++ + ++P
Sbjct: 286 LRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTP 343
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 34.7 bits (76), Expect = 0.072
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +3
Query: 15 GTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDN--KLF----VWSMHSTSP-- 170
G+ T P S+ L H+ V ++SPDG A+GG D KLF V M S
Sbjct: 14 GSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQA 73
Query: 171 ---VQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
++T+ H + + + P L++S D CI+F++
Sbjct: 74 RPLIRTFYDHAEPINDLDFHPRSTILISS---AKDNCIKFFD 112
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 34.7 bits (76), Expect = 0.072
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 11/102 (10%)
Frame = +3
Query: 15 GTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDN--KLF----VWSMHSTSP-- 170
G+ T P S+ L H+ V ++SPDG A+GG D KLF V M S
Sbjct: 106 GSSKTIPKHESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQA 165
Query: 171 ---VQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
++T+ H + + + P L++S D CI+F++
Sbjct: 166 RPLIRTFYDHAEPINDLDFHPRSTILISS---AKDNCIKFFD 204
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKA 209
P +QL R+ G W + +ASG D K+ VW + + T H V A
Sbjct: 205 PCVQLGRIA-GQTLFFLTFNWE-NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHA 262
Query: 210 IAWSPHQHGLLASG 251
+AW+ + +L SG
Sbjct: 263 VAWNNYTPEVLLSG 276
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +3
Query: 165 SPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVET 344
SP AH + V +I+++ H LLA+G +AD ++ W+ +QP I++ + V
Sbjct: 336 SPSFIIHAHDSEVSSISYNIHAPNLLATG--SADESVKLWDLSNNQPSWIATNKPNAVRA 393
Query: 345 LQR 353
+ +
Sbjct: 394 MNK 396
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 34.7 bits (76), Expect = 0.072
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWS 221
L+GH W P+GQ LA+G D +W + + S ++ ++ A++A+ ++
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFT 371
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGG 254
V + SPDG+ +A G+ + + S + H+ + AW P+ +LA+
Sbjct: 280 VNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQ-ILAT-- 336
Query: 255 GTADRCIRFWNTLT-SQPMQISSVQLGLVETLQRIGLDSRLL--TEPDTGVEISVVDAG 422
G D R W+ SQ +++ +G + L R D R L EP V + +AG
Sbjct: 337 GNQDTTCRLWDVRNLSQSLKVLKGNMGAIRAL-RFTSDGRFLAMAEPADFVHLFDTEAG 394
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRC 272
SPDG+ +A G+D + + + T H+ A AW P+ + G D+
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNG---VTFATGNQDKT 342
Query: 273 IRFWNT-LTSQPMQISSVQLGLVETLQRIGLDSR--LLTEPDTGVEISVVDAGCETDR 437
R W+T S+ + + LG V ++ R D R + EP V I +G + ++
Sbjct: 343 CRIWDTRKLSESVAVLKGNLGAVRSI-RFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 399
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWS 221
L+GH W P+G + A+G D +W S V ++ AV++I ++
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 33.9 bits (74), Expect = 0.13
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRC 272
SPDG+ +A G+D + + + T H+ A AW P+ + G D+
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNG---VTFATGNQDKT 336
Query: 273 IRFWNT-LTSQPMQISSVQLGLVETLQRIGLDSR--LLTEPDTGVEISVVDAGCETDR 437
R W+T S+ + + LG V ++ R D R + EP V I +G + ++
Sbjct: 337 CRIWDTRKLSESVAVLKGNLGAVRSI-RFTSDGRYVAMAEPADFVHIYDTKSGYKKEQ 393
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWS 221
L+GH W P+G + A+G D +W S V ++ AV++I ++
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFT 365
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 NDNKLFVWSMHS-TSPVQTYSAHVAAVKAIAWSPHQHGLLASGG 254
+ NK+ + + S T PV H A+V AIAW+P + SGG
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGG 284
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDG-QSLASGGNDNKLFVWSM------HSTSPVQTYSAHVAAVKAI 212
L+ H+ V + W+P + + SGG+D + +W + + P+ YSA + + +
Sbjct: 260 LERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAG-SEINQL 318
Query: 213 AWSPHQ 230
WS Q
Sbjct: 319 QWSSSQ 324
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 NDNKLFVWSMHS-TSPVQTYSAHVAAVKAIAWSPHQHGLLASGG 254
+ NK+ + + S T PV H A+V AIAW+P + SGG
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGG 284
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDG-QSLASGGNDNKLFVWSM------HSTSPVQTYSAHVAAVKAI 212
L+ H+ V + W+P + + SGG+D + +W + + P+ YSA + + +
Sbjct: 260 LERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAG-SEINQL 318
Query: 213 AWSPHQ 230
WS Q
Sbjct: 319 QWSSSQ 324
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 NDNKLFVWSMHS-TSPVQTYSAHVAAVKAIAWSPHQHGLLASGG 254
+ NK+ + + S T PV H A+V AIAW+P + SGG
Sbjct: 241 DSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHICSGG 284
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDG-QSLASGGNDNKLFVWSM------HSTSPVQTYSAHVAAVKAI 212
L+ H+ V + W+P + + SGG+D + +W + + P+ YSA + + +
Sbjct: 260 LERHQASVNAIAWAPQSCKHICSGGDDTQALIWELPTVAGPNGIDPMSVYSAG-SEINQL 318
Query: 213 AWSPHQ 230
WS Q
Sbjct: 319 QWSSSQ 324
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQS-----LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
++L GH V L W P L SG D +FVW++ + +QT H V +
Sbjct: 60 KILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV 119
Query: 213 A 215
A
Sbjct: 120 A 120
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSPDGQS-----LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
++L GH V L W P L SG D +FVW++ + +QT H V +
Sbjct: 60 KILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGV 119
Query: 213 A 215
A
Sbjct: 120 A 120
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +1
Query: 358 VSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETL 516
+ T G++ N I + + GH V LALSPD +VTG+ D T+
Sbjct: 2640 IITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTV 2692
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
DG+ + G DN + + S ++T H A V +A SP + L+ G+ D +
Sbjct: 2637 DGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVT---GSRDSTVL 2693
Query: 279 FW 284
W
Sbjct: 2694 LW 2695
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT 179
GH V L SPD L +G D+ + +W +H +T
Sbjct: 2666 GHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRT 2705
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 33.9 bits (74), Expect = 0.13
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRC 272
SPDG+ L G++ + + ++ + T S H+ A AW H G S G D+
Sbjct: 284 SPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAW--HPDGFTFS-TGNQDKT 340
Query: 273 IRFWNTLT-SQPMQISSVQLGLVETLQRIGLDSR--LLTEPDTGVEISVVDAGCETDR 437
R W+ S+ + + LG + ++ R D + + EP V + V G ET++
Sbjct: 341 CRVWDIRNLSKSVAVLRGNLGAIRSI-RYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 397
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWS 221
L GH W PDG + ++G D VW + + S V ++ A+++I ++
Sbjct: 313 LSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYT 369
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.9 bits (74), Expect = 0.13
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNT 290
+A+G D ++ + + S + T S H V ++ WS +L +GG D IRFW+
Sbjct: 163 IAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGG--CDGAIRFWDI 220
Query: 291 LTSQPMQI---SSVQLGL-VETLQRIGLDSRL 374
+ ++ S QLG L+R + S+L
Sbjct: 221 RRAGCFRVLDQSQTQLGFRPPILKRTAVGSKL 252
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHS 161
H V GLK + DG L S G+D+++ +W + S
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIES 343
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVK 206
+L+GH + V ++ + Q L + G+D ++ VWS T + VA K
Sbjct: 394 MLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDK 445
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSM 155
S L GHR V ++WS + L +GG D + W +
Sbjct: 183 SHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 364 THGYSQNQILVW-KYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLEC 531
T+G + W K S + +L GH V +AL + + TG+ DETLR +C
Sbjct: 124 TYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDC 180
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+ + + +Q H+ + +K+SPD LAS G D + VW +
Sbjct: 401 LHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEV 440
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
L+GH++ V GL +S L S G D++L VWSM
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTY---SAHVAAVKAIAWS-PHQHGLLASGGG 257
WSPDG L + + + ++S H ++ + AH V +A+S P+Q + + G
Sbjct: 427 WSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCG- 485
Query: 258 TADRCIRFWNTLTSQPM 308
D+ I+ W+ +T +
Sbjct: 486 -EDKTIKVWDAVTGNKL 501
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
L+GH++ V GL +S L S G D++L VWSM
Sbjct: 925 LKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTY---SAHVAAVKAIAWS-PHQHGLLASGGG 257
WSPDG L + + + ++S H ++ + AH V +A+S P+Q + + G
Sbjct: 427 WSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCG- 485
Query: 258 TADRCIRFWNTLTSQPM 308
D+ I+ W+ +T +
Sbjct: 486 -EDKTIKVWDAVTGNKL 501
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
S+ +Q H+ + +K+S DG+ LAS G D + +W +
Sbjct: 356 SQEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +3
Query: 159 STSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQISS 320
S PV ++ H+ V ++WS QH LL+S + D+ +R W+ + +++ S
Sbjct: 457 SEKPVCSFVGHLDDVLDLSWSKSQH-LLSS---SMDKTVRLWDLSSKTCLKVFS 506
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM-HSTSPVQTYSAHVAAVKAIAWSPH 227
VL GH + V ++ D ++ +G D L W + + V+TY HV + + S
Sbjct: 251 VLDGHTKTVTYARFM-DSHTIVTGSTDGSLKQWDIDNGRRVVRTYRGHVNSRNFVGLSVW 309
Query: 228 QH-GLLASG 251
+H GL+ SG
Sbjct: 310 RHGGLVVSG 318
>At5g15690.1 68418.m01835 hypothetical protein very low similarity
to MtN20 [Medicago truncatula] GI:2598591
Length = 169
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 259 VPPPDASSPCWCGDHAIAFTAAT 191
V PP S CWCG+ I FT+ T
Sbjct: 17 VCPPGVPSKCWCGEEIITFTSKT 39
>At4g04780.1 68417.m00700 expressed protein very low similarity to
SP|Q13503 RNA polymerase II holoenzyme component SRB7
(RNAPII complex component SRB7) {Homo sapiens}
Length = 381
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 259 VPPPDASSPCWCGDHAIAFTAAT 191
V PP S CWCG+ I FT+ T
Sbjct: 17 VCPPGVPSKCWCGEEIITFTSKT 39
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 5/100 (5%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQT-YSAHVAAVKAIAWSPHQH-- 233
H Q V GL WS DG+ L S DN + W + + + A+ + + P
Sbjct: 435 HNQVVTGLAWSYDGRCLYSCSQDNYVRSWILCENAISEVPIPANTPGLSSTTDLPDDFLS 494
Query: 234 --GLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
G+ S G A +R +N PM + Q VE L
Sbjct: 495 CLGVALSPGNLAVALVRNFNVELLNPMYQARSQKAAVEFL 534
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+ + + +Q H V +K+S D LASGG D + VW +
Sbjct: 394 LHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEV 433
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 51 VLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAH 191
V GH++ V +K+ + + LAS D+ L +W + PV+T+ H
Sbjct: 544 VFSGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGH 589
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNT 290
+A+G +D ++ + + S + T S H V ++ WS +L +GG D IRFW+
Sbjct: 163 IAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGG--CDGAIRFWDI 220
Query: 291 LTSQPMQI---SSVQLGL 335
+ ++ S QLG+
Sbjct: 221 RRAGCFRVLDNSQTQLGV 238
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 45 SRVLQGHRQEVCGLKWSPDGQ-SLASGGNDNKLFVWSM 155
S L GHR V ++WS + L +GG D + W +
Sbjct: 183 SHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDI 220
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 174 QTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTSQ 302
Q + H A+ + W P G+ +G + D ++ W+T TSQ
Sbjct: 97 QHENGHKYAISSAIWYPIDTGMFITG--SFDHYVKVWDTNTSQ 137
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +3
Query: 63 HRQ--EVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYS--AHVAAVKAIAWSPH 227
H+Q +VCGL +P + L S GND+ +W M P + AH V + +SP
Sbjct: 309 HKQGSKVCGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPS 368
Query: 228 QHGLLASGGGTADRCIRFWNTL 293
+ + D IR W+++
Sbjct: 369 SGTKILT--TCQDNRIRIWDSI 388
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 32.3 bits (70), Expect = 0.39
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 42 LSRVLQGHR--QEVCGLKW-SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAI 212
+S V +GH+ + V G+ + P + + SG + ++F+W ++ A V I
Sbjct: 323 VSLVYKGHKNCETVKGVNFFGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHVVNCI 382
Query: 213 AWSPHQH-GLLASGGGTADRCIRFWNTLTSQ 302
PH H +LAS G +D I+ W + ++
Sbjct: 383 --EPHPHIPVLASSGIESD--IKVWTSKAAE 409
>At4g09170.1 68417.m01518 expressed protein ; expression supported
by MPSS
Length = 133
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = -2
Query: 427 SQPASTTDISTPVSGSVSSRESRPIRWSVSTKPSCTLEICIGCEVSVFQKRMQRSAVPPP 248
S +T D+ + S+R SR I + + P L I + C V +F + + R PPP
Sbjct: 5 SSAVTTDDVMLTCASCFSTRWSRII-FLILCSPLLCLSIPLLCAVEIFSRLLSRIVKPPP 63
Query: 247 DAS 239
++
Sbjct: 64 SSA 66
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
GH++++ L + D +G D +W M + + ++TY+ V V A++ SP
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAVSLSP 244
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 32.3 bits (70), Expect = 0.39
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 304 RCRSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQVAK-LTGHSYRVLYLALSPDG 480
+C+S V L + SS++++ +G S + V V K LTGHS V S +
Sbjct: 170 QCKSSVTVLKFGHMSSDILA-YGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNN 228
Query: 481 EAIVTGAGDETLRFLE 528
+ I + + D+T+R E
Sbjct: 229 QYIASSSLDKTIRVWE 244
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/64 (20%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQ---TYSAHVAAVKA 209
+L ++ H++ + W+P G A+ D + +WS+ + + ++ ++V A
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTA 746
Query: 210 IAWS 221
+AW+
Sbjct: 747 VAWT 750
>At1g33450.1 68414.m04140 hypothetical protein low similarity to
MtN20 [Medicago truncatula] GI:2598591
Length = 160
Score = 32.3 bits (70), Expect = 0.39
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 259 VPPPDASSPCWCGDHAIAFTAAT 191
V PP S CWCG+ I FT+ T
Sbjct: 17 VCPPCVPSKCWCGEEIITFTSKT 39
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 31.9 bits (69), Expect = 0.51
Identities = 21/82 (25%), Positives = 35/82 (42%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
L + L G + + + D +S+ + + N LFVW + S T + H V A+ S
Sbjct: 265 LIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVS 324
Query: 222 PHQHGLLASGGGTADRCIRFWN 287
+ S DR I+ W+
Sbjct: 325 KFSSRHVVS--AAYDRTIKLWD 344
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWS 221
SPD +A+G D + VWS+ + V + + +WS
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKA 209
P + + L+GH+ ++ G+ L S D L +W +S V++ + A
Sbjct: 175 PGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSL 234
Query: 210 IAWSP 224
I+ P
Sbjct: 235 ISEGP 239
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 403 YPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLEC 531
+P L VA L GH + +AL + + + +GD TL +C
Sbjct: 174 FPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDC 216
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.51
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 6/92 (6%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAV----KAIAWS--PHQHGLLASG 251
WSPD + + SG +D + W S V +A + + + WS + +L SG
Sbjct: 206 WSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLVSG 265
Query: 252 GGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
T ++FW++ ++ S G V TL
Sbjct: 266 DSTG--TVQFWDSEHGTLLEAHSNHKGDVNTL 295
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.9 bits (69), Expect = 0.51
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 412 LTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
+++V +L GH V +L SP+ E I+T + D ++R
Sbjct: 279 VSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIR 314
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 33 PIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS 167
P+ L+ L+GH V GL +S DG+SLA+ D + V+ + S
Sbjct: 76 PLDLN-TLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDAS 119
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 39 QLSRVLQ--GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH 158
++SRV+Q GH+ V L +SP+ + + + D + VW+++
Sbjct: 278 EVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 168 PVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCI 275
PV H A+V AIAW+PH + S G + I
Sbjct: 259 PVVELQRHQASVNAIAWAPHSSSHICSAGDDSQALI 294
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = +3
Query: 15 GTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHV 194
G R + ++L + L H +V L+ S +ASG +D + +W + S S V+
Sbjct: 3363 GPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFP 3422
Query: 195 AAVKAI 212
+ AI
Sbjct: 3423 VPISAI 3428
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
L +VL+ H+Q V L + D + L SG + +L W++
Sbjct: 3534 LHKVLKFHKQPVTALHLTSDLKQLLSGDSAGQLLSWTV 3571
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 31.5 bits (68), Expect = 0.67
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWS-PDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
L +L H + L S +G L SGG+D + VW + +++
Sbjct: 251 LVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLC 310
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQ--LGLVETLQRIGLDSRLLTE 383
+L S G+AD+ +R W ++ ++ LG V+ L DSR E
Sbjct: 311 LAVVSDILCS--GSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADE 365
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHS 161
L+GH++ + GL +S L S G D +LF W+ S
Sbjct: 911 LKGHQKHITGLAFSTALNILVSSGADAQLFFWTADS 946
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP 170
+GH V ++++P G+S ASG D + +W +P
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNP 304
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWS-PDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
R L+ H +K+ D L SGG+D + W + + + H V+ SP
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSP 188
Query: 225 HQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGL 335
+L + G+ D ++ W+ I+ + GL
Sbjct: 189 VNDSMLVT--GSYDHTVKVWDARVHTSNWIAEINHGL 223
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIA 215
Q+SR+ G+ QE+ + +L +GG ++ +W ++ V +H+ V +
Sbjct: 121 QVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVH 180
Query: 216 WSPHQHGLLASGGGTADRCIRFWNT 290
+ P++ L S + D I +NT
Sbjct: 181 FVPNKPNKLLS--ASVDGLICLFNT 203
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 12 AGTRXTPPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
AG R + H EV L +S DG L SGG + L VW +
Sbjct: 265 AGVRGEDDAESCTTWHWHSAEVNVLNFSSDGAYLYSGGREGVLVVWQL 312
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKA-IAW 218
L SG DN + VWS+ + +QT + H + V + I W
Sbjct: 280 LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICW 316
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 400 KYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLEC 531
K S + + +L GH V +AL + + T + DET+R +C
Sbjct: 130 KGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDC 173
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 66 RQEVCGLKWSPD--GQSLASGGNDNK--LFVWSMHST-SPVQTYSAHVAAVKAIAWSPHQ 230
R+ L+W+P+ Q + + +D+ L +W M + SPV+ ++ H V A+ W P
Sbjct: 216 RRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSD 275
Query: 231 HGLLASGGGTADRCIRFWNTLTSQ 302
L + D W+T T++
Sbjct: 276 SSYLLT--CAKDNRTICWDTNTAE 297
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
R GH++ V ++W P D L + DN+ W ++ V A + W P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 225 HQHGLLAS 248
G++++
Sbjct: 317 KIPGVISA 324
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 66 RQEVCGLKWSPD--GQSLASGGNDNK--LFVWSMHST-SPVQTYSAHVAAVKAIAWSPHQ 230
R+ L+W+P+ Q + + +D+ L +W M + SPV+ ++ H V A+ W P
Sbjct: 216 RRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSD 275
Query: 231 HGLLASGGGTADRCIRFWNTLTSQ 302
L + D W+T T++
Sbjct: 276 SSYLLT--CAKDNRTICWDTNTAE 297
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +3
Query: 48 RVLQGHRQEVCGLKWSP-DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
R GH++ V ++W P D L + DN+ W ++ V A + W P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 225 HQHGLLAS 248
G++++
Sbjct: 317 KIPGVISA 324
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 31.1 bits (67), Expect = 0.89
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
+GH V + G+ +ASG D + +W + + ++ + A+ +AW+P
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD-EAIMCVAWNP 474
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 31.1 bits (67), Expect = 0.89
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +3
Query: 84 LKWSPD--GQSLASGGNDNKLFVWSM---HSTSPVQTYSAHVAAVKAIAWSPHQHGLLAS 248
L+W PD Q L + D+ V + + SPV+T+ H V A+ W P L +
Sbjct: 211 LQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLT 270
Query: 249 GGGTADRCIRFWNTLTSQ 302
G D WNT T +
Sbjct: 271 CG--KDNRTICWNTKTGK 286
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADR 269
+S DG++LAS D+ + + + ++ + H + + P ++AS G+ D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS--GSLDH 168
Query: 270 CIRFWNTLTSQ 302
+R WN T +
Sbjct: 169 EVRLWNAKTGE 179
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 31.1 bits (67), Expect = 0.89
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADR 269
+S DG++LAS D+ + + + ++ + H + + P ++AS G+ D
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS--GSLDH 168
Query: 270 CIRFWNTLTSQ 302
+R WN T +
Sbjct: 169 EVRLWNAKTGE 179
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSM--HSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
WSPDG + SG D + V+ + ++ P Q+ AH V W Q L++
Sbjct: 446 WSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAHQKRVFKAEWHYSQPLLIS 499
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/74 (29%), Positives = 34/74 (45%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H + L S D + L SG D VW + V++ +AH AV A+ GL+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVV--SGFDGLV 267
Query: 243 ASGGGTADRCIRFW 284
+ G+AD ++ W
Sbjct: 268 FT--GSADGTVKVW 279
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHST-----SP---VQTYSAHVAAVKA 209
L GH + V +K+ D +++ S DN L +W+++ T SP TY H
Sbjct: 890 LAGHEKAVSYVKFM-DSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNF 948
Query: 210 IAWSPHQHGLLASGGGTADRCIRFWNTLTSQPMQISSVQLGLVETL 347
+ S G +A G T + ++ S PM ++S + G V+ +
Sbjct: 949 VGLSV-LDGYIACGSETNE----VYSYYKSLPMPMTSYKFGSVDPI 989
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKA 209
L+GH++ + GL +S L S G D ++ WS+ + ++ + + A KA
Sbjct: 900 LKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQMPAGKA 951
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 75 VCGLKWSPDGQS-LASGGNDNKLFVWSMHSTS-PVQTYSAHVAAVKAIAWSPHQHGLLAS 248
V G+ ++P + L + +++ + VW + PVQ H A+ +P GL+ S
Sbjct: 211 VRGVDYNPKREHILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILS 270
Query: 249 GGGTADRCIRFW 284
G D + W
Sbjct: 271 AG--TDSVVNLW 280
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTS-PVQT-YSAHVAAV 203
+GH V ++++P G+S SG D + +W + S + P ++ S HV V
Sbjct: 262 KGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLV 312
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
+SP+G + SG D W + S V ++ + I W P
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGP 302
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
+SP+G + SG D W + S V ++ + I W P
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGP 299
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 403 YPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLRFLEC 531
+P L VA L GH+ + +AL + + + + D TLR +C
Sbjct: 118 FPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDC 160
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKA 209
P + + L+GH +E+ G+ L S D L VW +S V + + A
Sbjct: 119 PGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSL 178
Query: 210 IAWSP 224
I+ P
Sbjct: 179 ISEGP 183
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAW 218
V L W PDG+++A G D + + + + ++ H AV + W
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNW 114
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 81 GLKWSPDGQSLASGGNDNKLFVWSM 155
GLKWSPDG + DN L ++ +
Sbjct: 56 GLKWSPDGSCFLASSEDNTLSLFHL 80
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP 170
+GH V ++++P G S ASG D + +W +P
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANP 304
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSP 170
+GH V ++++P G S ASG D + +W +P
Sbjct: 267 KGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANP 304
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 36 IQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHV-AAVKAI 212
+++ R +GH + L +S DG+ + S D L +W + + HV + A+
Sbjct: 547 LKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQID--GVHVDVPITAL 604
Query: 213 AWSPH 227
+ SP+
Sbjct: 605 SLSPN 609
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 93 SPDGQSLASGGNDNKLFVWSMHSTSPVQTYS-AHVAAVKAIAWSPHQHGLLASGGGTADR 269
SP +A G D K+ V ++ + T+ A AV A+++S LLASGG
Sbjct: 190 SPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLLASGGSFG-- 247
Query: 270 CIRFWN 287
I WN
Sbjct: 248 VISIWN 253
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 388 ILVWKYPSLTQVAKLTGHSYRVLYLALSPDGEAIVTGAGDETLR 519
I ++ +L V + GH+ R+ L S DG+ +++ + D +LR
Sbjct: 539 IRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLR 582
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Frame = +1
Query: 304 RCRSQVCNLAWSKHSSELVSTHGYSQNQILVWK------------YPSLTQVAKLTGHSY 447
RC L W S L G N+I+VW+ + S + + +LTGH
Sbjct: 178 RCLLYTMRL-WGDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEG 236
Query: 448 RVLYLALSPDGEAIVTGAGDETLRFLE 528
+ + S DG IV+ + D + R E
Sbjct: 237 SIFRIVWSLDGSKIVSVSDDRSARIWE 263
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPV 173
L GH + + WS DG + S +D +W + S V
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVV 270
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Frame = +1
Query: 304 RCRSQVCNLAWSKHSSELVSTHGYSQNQILVWK------------YPSLTQVAKLTGHSY 447
RC L W S L G N+I+VW+ + S + + +LTGH
Sbjct: 178 RCLLYTMRL-WGDSISTLRIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGHEG 236
Query: 448 RVLYLALSPDGEAIVTGAGDETLRFLE 528
+ + S DG IV+ + D + R E
Sbjct: 237 SIFRIVWSLDGSKIVSVSDDRSARIWE 263
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPV 173
L GH + + WS DG + S +D +W + S V
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVV 270
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
+G L GG +++W + + ++ + H +V + +S LL S G+ D IR
Sbjct: 89 EGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFS-GDDSLLVS--GSQDGSIR 145
Query: 279 FWNTL 293
W+ +
Sbjct: 146 VWSLI 150
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 39 QLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+L + GH + V L +S D L SG D + VWS+
Sbjct: 111 KLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 168 PVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCI 275
PV H A+V AIAW+PH + + G + I
Sbjct: 259 PVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALI 294
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 90 WSPDGQSLASGGNDNKLFVWSM--HSTSPVQTYSAHVAAVKAIAW 218
WSPDG ++SG D + ++ + ++ SP + AH V W
Sbjct: 590 WSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEW 634
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHS 161
V L +S DG+ L S G D +++VW + +
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRT 405
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQ 176
H ++ L S DG+ LA+GG D + +W + + VQ
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQ 242
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTY-SAHVAAVKAIAW 218
L + L H+ V + ++ DG L SG +D ++ +W + S ++ S H + +
Sbjct: 47 LDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKF 106
Query: 219 SPHQHGLLASGGGTADRCIRFWNTLTSQPMQIS 317
P AD+ +R+ L S ++ S
Sbjct: 107 MPFSDDRTIV-TSAADKQVRYSKILESGQVETS 138
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 63 HRQEVCGLKW-SPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGL 239
+R+ V G+ + P + + SG + ++F+W ++ A V I PH +
Sbjct: 308 NRETVKGVNFFGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLM 367
Query: 240 LASGGGTADRCIRFW 284
+SG D I+ W
Sbjct: 368 CSSG---IDTDIKIW 379
>At2g17030.1 68415.m01963 F-box family protein similar to
hypothetical protein GB:AAB81667 ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 407
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 92 PLQAADLLSVTLENSGELYRWRXSCXRWR 6
P DL+S +LE+S +L ++R C WR
Sbjct: 8 PKDLLDLISKSLESSFDLIQFRSVCSSWR 36
>At1g58060.1 68414.m06580 helicase domain-containing protein contains
similarity to SP|P24785 Dosage compensation regulator
(Male-less protein) (No action potential protein)
{Drosophila melanogaster}; contains Pfam profiles
PF04408: Helicase associated domain (HA2), PF00271:
Helicase conserved C-terminal domain
Length = 1459
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/68 (30%), Positives = 27/68 (39%)
Frame = +3
Query: 117 SGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLT 296
SG L VW T P YS VKAI + + A+ G + +N+LT
Sbjct: 1262 SGRKKENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETT---FNSLT 1318
Query: 297 SQPMQISS 320
Q Q S
Sbjct: 1319 KQGNQTKS 1326
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Frame = +3
Query: 42 LSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWS-MHSTSPVQTYSAHVAAV----K 206
L L H V L S DG+ L SG D + VW + + + + + V A+ K
Sbjct: 270 LVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRK 329
Query: 207 AIAWSPHQHGLLASGGGTADRCIRFW 284
AI L+ S G+AD+ +R W
Sbjct: 330 AIMCLAVASDLVLS--GSADKSLRVW 353
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +3
Query: 99 DGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIR 278
+G A+ G +L +W+ + + PVQ++ +V ++ ++P + LLA+ +DR I
Sbjct: 164 EGDLFATAGA--QLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLAT--SASDRSIT 219
Query: 279 FWN 287
++
Sbjct: 220 IYD 222
>At4g24020.1 68417.m03452 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 959
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +3
Query: 207 AIAWSPHQHG-LLASGGGTADRCIRF 281
A W P QHG +LA+GGG C F
Sbjct: 345 AQTWVPCQHGSVLANGGGLKKNCTSF 370
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 60 GHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
GH + V G+ + PD + + S +D +FVW +
Sbjct: 610 GHGEAVTGVIFLPDCKHIISVASDGCIFVWKL 641
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHS 161
L+GH Q++ L +S L S +D KL +WS S
Sbjct: 507 LEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 63 HRQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLL 242
H V L + D L S D + VW +H +++ AH AV ++ + L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTA---ESLV 190
Query: 243 ASGGGTADRCIRFW 284
+ G+AD ++ W
Sbjct: 191 FT--GSADGTVKVW 202
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 117 SGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLASGGGTADRCIRFWN 287
+G DN + WS+ S + T S H + V + +G+L S G+ D +R W+
Sbjct: 602 TGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLV---VVNGVLYS--GSWDGTVRLWS 653
>At4g15490.1 68417.m02367 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase ;simalr to
UDP-glucose:sinapate glucosyltransferase GI:9794913 from
[Brassica napus]
Length = 479
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 403 ISTPVSGSVSSRESRPIRWSVSTKPSCTLEICIGCEVSVFQKRMQRSA 260
+S+ V G +S S + W S +PS + I G ++ Q++M+ A
Sbjct: 255 LSSDVKGDISEPASDCMEWLDSREPSSVVYISFGTIANLKQEQMEEIA 302
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 111 LASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSP 224
L SG D + +W + S + + HVA V+ I SP
Sbjct: 552 LISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSP 589
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = +3
Query: 30 PPIQLSRVLQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSMH------STSPVQTYSAH 191
P I L ++ GH + V +K+ D +L S DN L +W + + SP+ +++ H
Sbjct: 693 PKIPLCTMI-GHSKTVSYVKFV-DSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGH 750
Query: 192 VAAVKAIAWSPHQHGLLASGGGT 260
+ S G +A+G T
Sbjct: 751 TNLKNFVGLSV-SDGYIATGSET 772
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 57 QGHRQEVCGLKWSPDGQSLASGGNDNKLFVWSM 155
+ H ++ +K+S DG+ L S D L VW +
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWDL 402
>At2g17036.1 68415.m01966 F-box family protein ; similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 428
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 92 PLQAADLLSVTLENSGELYRWRXSCXRWR 6
P DL+S LE+S +L ++R C WR
Sbjct: 7 PKDLLDLISKCLESSFDLIQFRSVCSSWR 35
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 RQEVCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYS-AHVAAVKAIAWSPHQHGLL 242
+ + S DG+ LA G + + + +Q AH+ V A+ +SP GL+
Sbjct: 285 KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALTFSPDSRGLV 344
Query: 243 A 245
+
Sbjct: 345 S 345
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWS 152
L+GH + + GL +S L S G D +L VW+
Sbjct: 904 LKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWS 152
L+GH + + GL +S L S G D +L VW+
Sbjct: 904 LKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 75 VCGLKWSPDGQSLASGGNDNKLFVWSMHSTSPVQTYSAHVAAVKAIAWSPHQHGLLA 245
V + + P + ASGG D + +W ++ + YS + ++ A+++S GLLA
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFS-RDGGLLA 298
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWS 152
L+GH + + GL +S L S G D +L VW+
Sbjct: 915 LKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 54 LQGHRQEVCGLKWSPDGQSLASGGNDNKLFVWS 152
L+GH + + GL +S L S G D +L VW+
Sbjct: 915 LKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,645,182
Number of Sequences: 28952
Number of extensions: 321441
Number of successful extensions: 1906
Number of sequences better than 10.0: 214
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1866
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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