Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1043
(400 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150; Eukary... 136 1e-31
UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15; Eukaryo... 108 3e-23
UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3; Fungi/... 83 1e-15
UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella... 75 4e-13
UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5; Archaea... 73 2e-12
UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13; Archae... 67 1e-10
UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10; Archae... 65 6e-10
UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9; Euryarc... 58 6e-08
UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3; Euryarc... 56 2e-07
UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus M... 56 3e-07
UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15; Euryar... 55 4e-07
UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1; ... 52 4e-06
UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1; Encephal... 48 5e-05
UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo... 44 0.001
UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|R... 36 0.29
UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD... 36 0.29
UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2; ... 35 0.51
UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1; P... 32 3.6
UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1; ... 32 4.8
UniRef50_A1U0M3 Cluster: Transposase, IS4 family protein; n=3; M... 31 8.3
UniRef50_Q0V456 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_Q24488 Cluster: Tyrosine-protein kinase transmembrane r... 31 8.3
>UniRef50_P46782 Cluster: 40S ribosomal protein S5; n=150;
Eukaryota|Rep: 40S ribosomal protein S5 - Homo sapiens
(Human)
Length = 204
Score = 136 bits (329), Expect = 1e-31
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = +2
Query: 167 PQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 346
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 347 VERLTNSLMMXGRXNGXK 400
VERLTNS+MM GR NG K
Sbjct: 69 VERLTNSMMMHGRNNGKK 86
>UniRef50_O65731 Cluster: 40S ribosomal protein S5; n=15;
Eukaryota|Rep: 40S ribosomal protein S5 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 197
Score = 108 bits (260), Expect = 3e-23
Identities = 52/72 (72%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISV-KEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTN 364
E+KLF RWS DVQ+SD+SL DYI V K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 365 SLMMXGRXNGXK 400
SLMM GR NG K
Sbjct: 68 SLMMHGRNNGKK 79
>UniRef50_Q9P3T6 Cluster: 40S ribosomal protein S5-B; n=3;
Fungi/Metazoa group|Rep: 40S ribosomal protein S5-B -
Schizosaccharomyces pombe (Fission yeast)
Length = 203
Score = 83.4 bits (197), Expect = 1e-15
Identities = 45/89 (50%), Positives = 60/89 (67%)
Frame = +2
Query: 134 AGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYA 313
A S++ + +SL + IKLF ++ V+V D+SL DYI++ + LPH+AGR+
Sbjct: 2 AASIIPKEVSLDETG---HIKLFNKFPFEGVEVKDISLVDYITIGN--GQPLPHTAGRFQ 56
Query: 314 HKRFRKAQCPIVERLTNSLMMXGRXNGXK 400
KRFRKA+C IVERLTNSLMM GR NG K
Sbjct: 57 TKRFRKARCFIVERLTNSLMMNGRNNGKK 85
>UniRef50_Q3LVW8 Cluster: Ribosomal protein S5; n=1; Bigelowiella
natans|Rep: Ribosomal protein S5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 207
Score = 75.4 bits (177), Expect = 4e-13
Identities = 31/71 (43%), Positives = 48/71 (67%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 367
++K+F RW V+++D+S+ +YI +KY + +PHS+G Y K F+K CPI+ERL S
Sbjct: 19 KMKVFNRWELEKVKINDISISNYIYFNKKYGELVPHSSGNYDKKPFKKTYCPILERLVCS 78
Query: 368 LMMXGRXNGXK 400
LM+ R +G K
Sbjct: 79 LMLKSRNSGKK 89
>UniRef50_Q8TXJ3 Cluster: 30S ribosomal protein S7P; n=5;
Archaea|Rep: 30S ribosomal protein S7P - Methanopyrus
kandleri
Length = 197
Score = 72.9 bits (171), Expect = 2e-12
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 367
E+K+FG+W +V+V D L+DYI +K Y LPH+ GR+A KRF KA+ PIVERL N
Sbjct: 12 EMKVFGKWDPTEVEVRDPGLKDYICLKPMY---LPHTGGRHAKKRFAKAEVPIVERLINR 68
Query: 368 LMMXGRXNGXK 400
+M + G K
Sbjct: 69 VMRTEKNTGKK 79
>UniRef50_Q8ZYK5 Cluster: 30S ribosomal protein S7P; n=13;
Archaea|Rep: 30S ribosomal protein S7P - Pyrobaculum
aerophilum
Length = 223
Score = 67.3 bits (157), Expect = 1e-10
Identities = 36/70 (51%), Positives = 43/70 (61%)
Frame = +2
Query: 191 IKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSL 370
I LFG+WS DV V D L+ YI +K LPH+ GRY + RF KA+ PIVERL N +
Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPVI---LPHTEGRYQNTRFGKARIPIVERLINLM 95
Query: 371 MMXGRXNGXK 400
M GR G K
Sbjct: 96 MRPGRNTGKK 105
>UniRef50_O59230 Cluster: 30S ribosomal protein S7P; n=10;
Archaea|Rep: 30S ribosomal protein S7P - Pyrococcus
horikoshii
Length = 218
Score = 64.9 bits (151), Expect = 6e-10
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 367
EIK+ GRWS DV+V D SL+ YI+++ + LPH+ GR+A K F KA IVERL N
Sbjct: 17 EIKVMGRWSTEDVEVKDPSLKPYINLEPRL---LPHTHGRHAKKHFGKANVHIVERLINK 73
Query: 368 LMMXG 382
+M G
Sbjct: 74 VMRSG 78
>UniRef50_Q8TRC2 Cluster: 30S ribosomal protein S7P; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanosarcina acetivorans
Length = 189
Score = 58.0 bits (134), Expect = 6e-08
Identities = 26/69 (37%), Positives = 44/69 (63%)
Frame = +2
Query: 194 KLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLM 373
K+FG+W +V+V D+ ++ Y+S+ +PHS+G++A ++F K++ IVERL N+LM
Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPVI---VPHSSGKHARQQFNKSEISIVERLANNLM 62
Query: 374 MXGRXNGXK 400
G K
Sbjct: 63 RTETNTGKK 71
>UniRef50_P14037 Cluster: 30S ribosomal protein S7P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Methanococcus vannielii
Length = 194
Score = 56.4 bits (130), Expect = 2e-07
Identities = 31/71 (43%), Positives = 40/71 (56%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 367
EIKLFG+W V V D SL+ +IS+ +PH+AGR + K F K + +VERL N
Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISLNPVL---IPHTAGRNSKKMFDKNKMHVVERLANK 64
Query: 368 LMMXGRXNGXK 400
LM G K
Sbjct: 65 LMATQVNTGKK 75
>UniRef50_A7I4X5 Cluster: Ribosomal protein S7; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S7 -
Methanoregula boonei (strain 6A8)
Length = 204
Score = 55.6 bits (128), Expect = 3e-07
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +2
Query: 152 ETMSLPQAADIPEIK--LFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRF 325
E + P+ P+ K LF +W +V+V+D SL Y+++ + +PHS G+++ + F
Sbjct: 5 EVKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQI---IPHSCGKFSRQEF 61
Query: 326 RKAQCPIVERLTNSLMMXGRXNGXK 400
KA IVERL N LM G K
Sbjct: 62 NKANMMIVERLINRLMQTENNTGKK 86
>UniRef50_P15763 Cluster: 30S ribosomal protein S7P; n=15;
Euryarchaeota|Rep: 30S ribosomal protein S7P -
Halobacterium salinarium (Halobacterium halobium)
Length = 210
Score = 55.2 bits (127), Expect = 4e-07
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = +2
Query: 104 EENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAK 283
E+ D+ EA + +T + A KLFG+W ++ D S + Y++V
Sbjct: 4 EQPAEDETEEAAAESEDTQEVAANA-----KLFGKWDVAEIHYEDPSTRRYLAVTP---- 54
Query: 284 YLPHSAGRYAHKRFRKAQCPIVERLTNSLMMXGRXNGXK 400
+ H+ GR+A K+F+K++ IVERL N LM G G K
Sbjct: 55 -VAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKK 92
>UniRef50_Q16KF0 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 77
Score = 52.0 bits (119), Expect = 4e-06
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 98 MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYIS 262
M+E D+ E V E + Q A++P+IKLFGRWS D+ +SD+S+ DYI+
Sbjct: 1 MSEVEAFDNFEEEQPQVFEQAPVVQPAELPDIKLFGRWSSDDIHISDISVSDYIA 55
>UniRef50_Q8SS72 Cluster: 40S RIBOSOMAL PROTEIN S5; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S5 -
Encephalitozoon cuniculi
Length = 208
Score = 48.4 bits (110), Expect = 5e-05
Identities = 27/71 (38%), Positives = 42/71 (59%)
Frame = +2
Query: 188 EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNS 367
EI LF ++S +V+V+++SL+ YI++ + +PH+A KA+ PI ER S
Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLSRR--GIVPHAATTITKGTTGKARIPIAERFVCS 79
Query: 368 LMMXGRXNGXK 400
LM GR +G K
Sbjct: 80 LMRHGRNSGKK 90
>UniRef50_Q59EK8 Cluster: Ribosomal protein S5 variant; n=1; Homo
sapiens|Rep: Ribosomal protein S5 variant - Homo sapiens
(Human)
Length = 107
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +2
Query: 332 AQCPIVERLTNSLMMXGRXNGXK 400
AQCPIVERLTNS+MM GR NG K
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKK 23
>UniRef50_Q46517 Cluster: ORFD 65; n=1; Desulfurococcus mobilis|Rep:
ORFD 65 - Desulfurococcus mobilis
Length = 65
Score = 35.9 bits (79), Expect = 0.29
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -2
Query: 399 FXPLXRPXIIREFVRRSTIGHWALRKRLXAYLPAE*GKYFAY 274
F P+ P I F+ ST+G W L KRL + LP G+Y +
Sbjct: 14 FLPMFLPGRITLFISLSTMGTWVLPKRLCSCLPPVCGRYTGF 55
>UniRef50_P41911 Cluster: Glycerol-3-phosphate dehydrogenase [NAD+]
2, mitochondrial precursor; n=37; Saccharomycetales|Rep:
Glycerol-3-phosphate dehydrogenase [NAD+] 2,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 440
Score = 35.9 bits (79), Expect = 0.29
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +2
Query: 86 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISV 265
KV ++ NW +A+ V+ E L PE+++ W +D ++ D +L D I+
Sbjct: 85 KVTVIGSGNWGTTIAK---VIAENTELHSHIFEPEVRM---W-VFDEKIGDENLTDIINT 137
Query: 266 KEKYAKYLPH 295
+ + KYLP+
Sbjct: 138 RHQNVKYLPN 147
>UniRef50_Q5KFI5 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 468
Score = 35.1 bits (77), Expect = 0.51
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Frame = +2
Query: 77 SNRKVPIMAEENWNDDVAEAGSVVVE-TMSLPQAADIPEIKLF--GRWSCYDVQVSDMSL 247
S+ + ++AEENW +A+AG + + MS+ +D+ E+ L+ GR + ++++ D
Sbjct: 201 SDEEEALVAEENWGQSIADAGGYMHKGKMSVWARSDMDEMCLWGAGRGNIGEIELQDH-- 258
Query: 248 QDYISVKEKYAKYLPHSAG 304
+ Y S + K+ + P G
Sbjct: 259 KQYPSSEFKFKTFTPPKTG 277
>UniRef50_A6G0N7 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 592
Score = 32.3 bits (70), Expect = 3.6
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 119 DDVAEAGSVVVETMSLPQAADIPEIKLFGR 208
DD+ G VV++ +SL QAAD +++LF R
Sbjct: 56 DDLDSGGPVVIKELSLAQAADWKQVELFER 85
>UniRef50_A7EQB6 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 573
Score = 31.9 bits (69), Expect = 4.8
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 204 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMXTSVSV 329
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 351 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 391
>UniRef50_A6RZ06 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 569
Score = 31.9 bits (69), Expect = 4.8
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 204 ADGVATMCKSLICLCRTTFPLKRSTQNIYLIQLAGMXTSVSV 329
ADGVAT+ +L+ + +T +TQN YLI + G T+V V
Sbjct: 350 ADGVATVL-TLVSIAQTQVVEFSATQNTYLIMVQGGSTTVGV 390
>UniRef50_A1U0M3 Cluster: Transposase, IS4 family protein; n=3;
Marinobacter|Rep: Transposase, IS4 family protein -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 460
Score = 31.1 bits (67), Expect = 8.3
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +2
Query: 146 VVETMSLPQAADIP-EIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPH---SAGRYA 313
V++T +P+A P + +L GR C+ Q+ ++ + I ++ + K LP GRYA
Sbjct: 148 VIDTTVMPKAIAYPSDARLAGR--CHR-QLVALAKDEGIKFRQTFCKGLPGLVWQVGRYA 204
Query: 314 HKRFRKAQCPIVERLTNSL 370
H R K ++ R+ +L
Sbjct: 205 HARQFKRMHKVLRRMHRNL 223
>UniRef50_Q0V456 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 463
Score = 31.1 bits (67), Expect = 8.3
Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +2
Query: 86 KVPIMAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSC-YDVQVSDMSLQDYIS 262
+ P AEE W D+VA+A S +ET +A P I G DV + S IS
Sbjct: 262 EAPFAAEEAWVDEVAQAQSAPLET----EAGSDPTITNAGLTEIDQDVAAVNGSADAQIS 317
Query: 263 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMXGR 385
+ P +A A ++ K + LT S M R
Sbjct: 318 NAPAASSIEPEAANAAAEAQWDKQPAGSDDPLTESFEMVPR 358
>UniRef50_Q24488 Cluster: Tyrosine-protein kinase transmembrane
receptor Ror precursor; n=1; Drosophila
melanogaster|Rep: Tyrosine-protein kinase transmembrane
receptor Ror precursor - Drosophila melanogaster (Fruit
fly)
Length = 685
Score = 31.1 bits (67), Expect = 8.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -1
Query: 286 IFCVLLFNGNVVLQRHIRDLHIVATPSAEKLDFRN 182
IF ++LF ++ +R++H + TPSA+K + N
Sbjct: 332 IFAIILFKRRTIMHYGMRNIHNINTPSADKNIYGN 366
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,013,972
Number of Sequences: 1657284
Number of extensions: 5881158
Number of successful extensions: 14719
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 14480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14710
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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