Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1041
         (800 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 191 CSLSGNPVKVLEHIKE 144
           C+  GNP+K +  +K+
Sbjct: 349 CNFEGNPIKTISWLKD 364


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 413 LFYLWYCLRK*IDHTENMLISGWL 484
           LFYL+YC +    H  +++   +L
Sbjct: 16  LFYLFYCYKTIKQHIYSLISLSYL 39


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 238 RMDKRWLLIGFFSHFNQKSSSVHLRIQFVNGS*IVL 345
           R+DK++ L+G+  ++ + S  V+L I  V G  +++
Sbjct: 105 RIDKQFGLLGYSINYRRISIFVNLAILGVFGEFVLV 140


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 413 LFYLWYCLRK*IDHTENMLISGWL 484
           LFYL+YC +    H  +++   +L
Sbjct: 16  LFYLFYCYKTIKQHIYSLISLSYL 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,390
Number of Sequences: 336
Number of extensions: 4481
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)