Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1041
         (800 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related conta...    31   0.67 
At4g32820.1 68417.m04668 expressed protein ; expression supporte...    29   2.7  
At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate 5-ki...    29   4.7  
At3g61080.1 68416.m06836 fructosamine kinase family protein cont...    28   6.3  
At3g13682.1 68416.m01728 amine oxidase family protein / SWIRM do...    28   8.3  

>At5g60760.1 68418.m07623 2-phosphoglycerate kinase-related contains
           weak similarity to 2-phosphoglycerate kinase (GI:467751)
           [Methanothermus fervidus]
          Length = 738

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = -1

Query: 275 EKKPISNHRLSILNANRRFWNEWNETPHCSLSGNPVKVLEHIKEN 141
           ++K  S H +++LN +  F   W  T     SG PV   E I+EN
Sbjct: 465 QRKGSSRHLMALLNTDGTFARTWPVTGKVDESGKPVFCNEMIEEN 509


>At4g32820.1 68417.m04668 expressed protein ; expression supported
           by MPSS
          Length = 1817

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 662 GSFCREESPRLCDHALLSN 718
           GSFC EES  + +HA++SN
Sbjct: 386 GSFCNEESDPISEHAVVSN 404


>At1g21980.1 68414.m02750 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 752

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 528 EF*KNTIFFNANSKTHNGTKGKGYNVFFLVLHLSVG 635
           +F KN  +FN  +K    T  KG+  + L+L+L +G
Sbjct: 329 QFKKNPCWFNGEAKKPGQTISKGHKKYDLMLNLQLG 364


>At3g61080.1 68416.m06836 fructosamine kinase family protein
           contains Pfam PF03881: Fructosamine kinase
          Length = 326

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 597 YNVFFLVLHLSVGYDGSRDLYL 662
           YN +F V+    GY+  RDLYL
Sbjct: 273 YNAYFKVMPKQAGYEKRRDLYL 294


>At3g13682.1 68416.m01728 amine oxidase family protein / SWIRM
           domain-containing protein similar to polyamine oxidase
           isoform-1 [Homo sapiens] GI:14860862; contains Pfam
           profile:PF01593  Flavin containing amine oxidase
          Length = 746

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 340 VLMNKIFDSARNFYGTR*LDKTDPIILFMVLFTQIN*SYGKYANFRLAYFGI 495
           VL++++    R  YG + +   DPI      +     SYG Y++ R+   G+
Sbjct: 500 VLLHRVLKKLRGIYGPKGVVVPDPIQTVCTRWGSDPLSYGSYSHVRVGSSGV 551


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,459,417
Number of Sequences: 28952
Number of extensions: 366800
Number of successful extensions: 693
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1814318400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)