Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1040
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   215   8e-58
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    27   0.75 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   3.0  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.0  
Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor prot...    23   9.2  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  215 bits (526), Expect = 8e-58
 Identities = 109/236 (46%), Positives = 148/236 (62%), Gaps = 8/236 (3%)
 Frame = +1

Query: 10   IDYAGPIMIADRKVRGCKLVKSFICVCVCLATRAVHLELVSDMTKEAFLAALSRFIARRG 189
            +DYAGPIM+     R     K +I + VC  T+AVH+ELVS++T  AFLAAL RF+ARRG
Sbjct: 1427 VDYAGPIMVKGTHRRAVP-TKGYISIFVCFVTKAVHIELVSNLTSSAFLAALRRFVARRG 1485

Query: 190  KPRNIFSDNGTTFVGAFN---ELARFLSQDLELRNF-----DSSIKFSFIPAYTPHFGGI 345
                + SDNGT F GA N   EL + L+ D           +  +K+ F P   PHFGG+
Sbjct: 1486 HVTELHSDNGTNFRGANNKLRELYKLLNSDTHQDEVVGWCAERDMKWKFTPPAAPHFGGL 1545

Query: 346  WESAVKSTKYHLKRTLGLTNLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHF 525
            WE+AVKS K+HLKR LG  +LTFE+++T L +IEA LNSRP+T +S+DP+D+  LTP HF
Sbjct: 1546 WEAAVKSMKFHLKRVLGTGHLTFEDLSTLLAEIEACLNSRPITAISEDPNDMEALTPGHF 1605

Query: 526  LIGRSVIFAPHPQVPDSTNITSLQRFRRIEYLKQHFWKRFSQEYISWLQQKSKWCK 693
            L+G  +       + D      L  +R I+   QH W R+ +EY+S LQ+++KW K
Sbjct: 1606 LVGNHLQTVADVDIAD-VPTNRLNHWRLIQKHMQHIWNRWHREYLSTLQKRAKWNK 1660


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 409 TFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPA 519
           T EE   C+ Q     + +PL  + DD  DLT L  A
Sbjct: 105 TDEEYMWCIRQTLIFPDGKPLNMILDDGGDLTNLVHA 141


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 466 PLTPLSDDPSDLTPLTPAHFLIG 534
           P++PL  DP ++TP  PA+  +G
Sbjct: 461 PISPL--DPGNVTPTPPAYTTLG 481


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -3

Query: 161 AARNASFVMSETSSR*TALVARHTHTHINDFTSLHP 54
           A  N+S + +  SS   +L  +H+H+ +N + + HP
Sbjct: 351 AGLNSSHIYTTPSSN--SLSTQHSHSPVNGYGNNHP 384


>Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor
           protein.
          Length = 211

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = +1

Query: 421 MATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLI 531
           +  CL    A+  +    PL+DD  D   L P + L+
Sbjct: 7   VVACLVATSAVSCAPTTRPLTDDFDDFVGLLPLNDLL 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,766
Number of Sequences: 2352
Number of extensions: 12526
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)