Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1040
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 111 6e-25
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 111 6e-25
AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical ... 57 1e-08
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical ... 29 4.2
AY241928-1|AAO85277.1| 806|Caenorhabditis elegans xylosyltransf... 28 5.6
AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical ... 28 5.6
AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide O-xyl... 28 5.6
AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulv... 28 5.6
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 28 7.4
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 28 7.4
AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule abn... 28 7.4
AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule abn... 28 7.4
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 28 7.4
AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein. 28 7.4
Z92973-2|CAB07492.2| 964|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical p... 27 9.8
Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical p... 27 9.8
U50309-5|AAG24135.1| 339|Caenorhabditis elegans Seven tm recept... 27 9.8
AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B serine... 27 9.8
AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A serine... 27 9.8
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 111 bits (266), Expect = 6e-25
Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Frame = +1
Query: 10 IDYAGPIMIADRKVRGCKLVKSFICVCVCLATRAVHLELVSDMTKEAFLAALSRFIARRG 189
+DY GPI ++ K+++ + CL TRA LEL+ D T F+ +L R G
Sbjct: 1805 LDYLGPIAYKNKDTH----FKAYVLIYTCLVTRAAKLELIPDGTTARFIESLGIIFNRVG 1860
Query: 190 KPRNIFSDNGTTFVGAFNELARFLSQDLELRNFDS-----SIKFSFIPAYTPHFGGIWES 354
P I+SDN TF+ L+ ++ D+ S I+F I P GGI+E
Sbjct: 1861 VPETIYSDNAQTFLLGEKILSEDVNSDITSETLTSFLATKDIEFRHITPLAPWQGGIYER 1920
Query: 355 AVKSTKYHLKRTLGLTNLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIG 534
V K + + +G L F + L+ EA++NSRPLTP + P D+ + P FL
Sbjct: 1921 LVGLVKAQIIKAIGKNILDFHSLRYVLSGAEAMINSRPLTPNPNSPDDMIAIRPQDFLNP 1980
Query: 535 RSVIFAPHPQVP-DSTNITSLQRFR----RIEYLKQHFWKRFSQEYISWLQQ---KSKWC 690
++ P + D T + QR R ++E + WK +S Y+S L++ K+K C
Sbjct: 1981 GVLLEVPKNSIRFDPTRSNTEQRTRDHLNKLEGVLNELWKLWSLRYLSTLRELKHKNKKC 2040
Query: 691 KT 696
T
Sbjct: 2041 ST 2042
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 111 bits (266), Expect = 6e-25
Identities = 75/242 (30%), Positives = 115/242 (47%), Gaps = 13/242 (5%)
Frame = +1
Query: 10 IDYAGPIMIADRKVRGCKLVKSFICVCVCLATRAVHLELVSDMTKEAFLAALSRFIARRG 189
+DY GPI ++ K+++ + CL TRA LEL+ D T F+ +L R G
Sbjct: 1805 LDYLGPIAYKNKDTH----FKAYVLIYTCLVTRAAKLELIPDGTTARFIESLGIIFNRVG 1860
Query: 190 KPRNIFSDNGTTFVGAFNELARFLSQDLELRNFDS-----SIKFSFIPAYTPHFGGIWES 354
P I+SDN TF+ L+ ++ D+ S I+F I P GGI+E
Sbjct: 1861 VPETIYSDNAQTFLLGEKILSEDVNSDITSETLTSFLATKDIEFRHITPLAPWQGGIYER 1920
Query: 355 AVKSTKYHLKRTLGLTNLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIG 534
V K + + +G L F + L+ EA++NSRPLTP + P D+ + P FL
Sbjct: 1921 LVGLVKAQIIKAIGKNILDFHSLRYVLSGAEAMINSRPLTPNPNSPDDMIAIRPQDFLNP 1980
Query: 535 RSVIFAPHPQVP-DSTNITSLQRFR----RIEYLKQHFWKRFSQEYISWLQQ---KSKWC 690
++ P + D T + QR R ++E + WK +S Y+S L++ K+K C
Sbjct: 1981 GVLLEVPKNSIRFDPTRSNTEQRTRDHLNKLEGVLNELWKLWSLRYLSTLRELKHKNKKC 2040
Query: 691 KT 696
T
Sbjct: 2041 ST 2042
>AC093703-4|AAY55885.1| 345|Caenorhabditis elegans Hypothetical
protein Y20F4.8 protein.
Length = 345
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Frame = +1
Query: 349 ESAVKSTKYHLKRTLGLTNLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFL 528
E V K L + LG +T E+ T + + E I+NSRP+TP DP D + PA F+
Sbjct: 29 ERLVALIKNVLYKVLGKQVVTILELETLVIETEGIINSRPITPNKKDPDDAPAIRPADFI 88
Query: 529 IGRSVIFAP--HPQVPDS-----TNITSLQRFRRIEYLKQHFWKRFSQEYISWLQ 672
+ + P H + ++ + + Q ++ +K+ WK FS+ YI+ L+
Sbjct: 89 SYNAQLTRPEHHKSIFEAIQGGESGKLTRQLMEKLRIIKEQLWKEFSKSYIAALR 143
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/73 (39%), Positives = 39/73 (53%)
Frame = +1
Query: 10 IDYAGPIMIADRKVRGCKLVKSFICVCVCLATRAVHLELVSDMTKEAFLAALSRFIARRG 189
+DY GP+ RK G + CV C TR H+ELV + +AF+ A+ RF++ RG
Sbjct: 908 LDYFGPMTF--RKEDG-STESCWGCVLSCATTRLTHIELVQQCSTKAFINAIRRFVSERG 964
Query: 190 KPRNIFSDNGTTF 228
P I SDN F
Sbjct: 965 IPDRIVSDNAPQF 977
>AF016662-8|AAB66061.2| 234|Caenorhabditis elegans Hypothetical
protein C33C12.9 protein.
Length = 234
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 412 FEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIGRSVIFAPHPQVPD 573
F + L +++ +L + P P ++P LT A GRS + P+VP+
Sbjct: 116 FAGLENLLGKVDVLLFNPPYVPTDEEPKSNIELTYAGGRTGRSTLDRLLPRVPE 169
>AY241928-1|AAO85277.1| 806|Caenorhabditis elegans
xylosyltransferase protein.
Length = 806
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 175 IARRGKPRNIFSDNGTTFVGAFNELARFLSQDLEL 279
I +R P+N+ D G+ +VG LA F D EL
Sbjct: 382 IGKREFPQNLRIDGGSDWVGIHRNLAEFSISDEEL 416
>AL110500-9|CAE54920.1| 586|Caenorhabditis elegans Hypothetical
protein Y87G2A.8b protein.
Length = 586
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 163 LSRFIARRGKPRNIFSDN-GTTFVGAFNELARFLSQD 270
L RFI R+ K SD GT F+G E A LSQD
Sbjct: 5 LFRFIFRKKKMLGYLSDLIGTLFIGDSTEKAMSLSQD 41
>AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide
O-xylosyltransferase protein.
Length = 806
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 175 IARRGKPRNIFSDNGTTFVGAFNELARFLSQDLEL 279
I +R P+N+ D G+ +VG LA F D EL
Sbjct: 382 IGKREFPQNLRIDGGSDWVGIHRNLAEFSISDEEL 416
>AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulva
protein 6 protein.
Length = 806
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 175 IARRGKPRNIFSDNGTTFVGAFNELARFLSQDLEL 279
I +R P+N+ D G+ +VG LA F D EL
Sbjct: 382 IGKREFPQNLRIDGGSDWVGIHRNLAEFSISDEEL 416
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 409 TFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHF 525
T EE C+ Q + +PL + DD DLT L A +
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKY 145
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 409 TFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHF 525
T EE C+ Q + +PL + DD DLT L A +
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKY 145
>AF068708-5|AAK68200.1| 628|Caenorhabditis elegans P granule
abnormality protein 3,isoform b protein.
Length = 628
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +1
Query: 235 AFNELARFLSQDLELRNFDSSIKFSFIPAYTPHFGGIWESAVKSTKYH----LKRTLGLT 402
+ N+L +FLS + DS KF+ H I ES KS+ K+T
Sbjct: 341 SLNQL-QFLSPKSKNLLVDSFKKFAQGLDSKDHVNRIIESLEKSSSSEPSATAKQTTTSN 399
Query: 403 NLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIGRSVIFAPHPQVPDSTN 582
T A + +E + SR P + +DL + + +IG SV A H +P+ N
Sbjct: 400 GPTTVSTAAQVVTVEKMPFSRQTIPC--EGTDLANVLNSAKIIGESVTVAAHDVIPEKLN 457
>AF068708-4|AAC17755.1| 693|Caenorhabditis elegans P granule
abnormality protein 3,isoform a protein.
Length = 693
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +1
Query: 235 AFNELARFLSQDLELRNFDSSIKFSFIPAYTPHFGGIWESAVKSTKYH----LKRTLGLT 402
+ N+L +FLS + DS KF+ H I ES KS+ K+T
Sbjct: 406 SLNQL-QFLSPKSKNLLVDSFKKFAQGLDSKDHVNRIIESLEKSSSSEPSATAKQTTTSN 464
Query: 403 NLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIGRSVIFAPHPQVPDSTN 582
T A + +E + SR P + +DL + + +IG SV A H +P+ N
Sbjct: 465 GPTTVSTAAQVVTVEKMPFSRQTIPC--EGTDLANVLNSAKIIGESVTVAAHDVIPEKLN 522
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 409 TFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHF 525
T EE C+ Q + +PL + DD DLT L A +
Sbjct: 107 TDEEYEWCIEQTIVFKDGQPLNMILDDGGDLTNLVHAKY 145
>AB120729-1|BAC87886.1| 693|Caenorhabditis elegans PGL-3 protein.
Length = 693
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +1
Query: 235 AFNELARFLSQDLELRNFDSSIKFSFIPAYTPHFGGIWESAVKSTKYH----LKRTLGLT 402
+ N+L +FLS + DS KF+ H I ES KS+ K+T
Sbjct: 406 SLNQL-QFLSPKSKNLLVDSFKKFAQGLDSKDHVNRIIESLEKSSSSEPSATAKQTTTSN 464
Query: 403 NLTFEEMATCLTQIEAILNSRPLTPLSDDPSDLTPLTPAHFLIGRSVIFAPHPQVPDSTN 582
T A + +E + SR P + +DL + + +IG SV A H +P+ N
Sbjct: 465 GPTTVSTAAQVVTVEKMPFSRQTIPC--EGTDLANVLNSAKIIGESVTVAAHDVIPEKLN 522
>Z92973-2|CAB07492.2| 964|Caenorhabditis elegans Hypothetical
protein Y6G8.2 protein.
Length = 964
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +1
Query: 136 MTKEAFLAALSRFIARRGKPRNIFSDNGTTFVGAFNELARFLSQDLELRNFDSSIKFSFI 315
+T FL L+R + R KP N+F+ + FN A + L + I + I
Sbjct: 211 LTNAIFLENLNRMLTSRQKPLNVFTFEVNLWQEPFNNHAAIIMSHLNSNFLNLIILSTPI 270
Query: 316 PAYTPHFGGI 345
P F I
Sbjct: 271 PGTHLKFDAI 280
>Z47745-3|CAA87666.1| 313|Caenorhabditis elegans Hypothetical
protein T19H5.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 52 RGCKLVKSFICVCVCLATRAVHLELVSDMTKEAFLAALSRFIARRGKPR 198
R +L F+ VC+ L ++HL L+S + F + F + R P+
Sbjct: 49 RPIRLTLKFLSVCLILCAISMHLSLLSQLAPPNF-SPFFFFFSNRSPPK 96
>Z46242-12|CAA86332.1| 690|Caenorhabditis elegans Hypothetical
protein F35G12.3b protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 310 FIPAYTPHFG-GIWESAVKSTKYHLKRTLGLTN 405
F+ +YT G GIWE + T+YH K L L N
Sbjct: 108 FVDSYTNCLGNGIWECMLL-TEYHQKNVLQLMN 139
>Z46242-11|CAA86326.1| 1077|Caenorhabditis elegans Hypothetical
protein F35G12.3a protein.
Length = 1077
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 310 FIPAYTPHFG-GIWESAVKSTKYHLKRTLGLTN 405
F+ +YT G GIWE + T+YH K L L N
Sbjct: 108 FVDSYTNCLGNGIWECMLL-TEYHQKNVLQLMN 139
>U50309-5|AAG24135.1| 339|Caenorhabditis elegans Seven tm receptor
protein 90 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +1
Query: 223 TFVGAFNELARFLSQDLELRNFDSSIKFSFIPAYTPHFGGIWESAVKSTKYHLKRTLGLT 402
+F+G F + FL++ + + + FS PHF W +A+ + Y + +L
Sbjct: 47 SFLGIFFSIVDFLNKPMVHIFGGAYLVFSLNSLGLPHFLANWFNALNCSCYGMTISLLAV 106
Query: 403 NLTFEEMATC 432
+ + +A C
Sbjct: 107 HFIYRYLAVC 116
>AF256467-1|AAF71546.1| 690|Caenorhabditis elegans SEL-5B
serine/threonine kinase protein.
Length = 690
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 310 FIPAYTPHFG-GIWESAVKSTKYHLKRTLGLTN 405
F+ +YT G GIWE + T+YH K L L N
Sbjct: 108 FVDSYTNCLGNGIWECMLL-TEYHQKNVLQLMN 139
>AF256466-1|AAF71545.1| 1077|Caenorhabditis elegans SEL-5A
serine/threonine kinase protein.
Length = 1077
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 310 FIPAYTPHFG-GIWESAVKSTKYHLKRTLGLTN 405
F+ +YT G GIWE + T+YH K L L N
Sbjct: 108 FVDSYTNCLGNGIWECMLL-TEYHQKNVLQLMN 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,578
Number of Sequences: 27780
Number of extensions: 313379
Number of successful extensions: 836
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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