Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1039
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0650 - 4838977-4839078,4839179-4839196,4839371-4839528,483... 61 8e-10
01_01_0054 + 411675-411911,412097-412213,412401-412439,412703-41... 61 8e-10
02_04_0594 - 24182946-24183641,24184122-24184476,24184553-241847... 56 3e-08
01_06_0026 + 25738960-25739075,25740385-25740733,25740825-25741511 55 7e-08
10_02_0089 - 5138048-5138561,5138864-5139105,5139712-5140079,514... 54 1e-07
02_04_0022 - 18992517-18993033,18993119-18993360,18993535-189939... 54 1e-07
01_07_0032 - 40608330-40609474,40611524-40611647 51 9e-07
04_01_0055 + 576483-576584,576684-576865,576950-577316,577391-57... 51 1e-06
01_07_0034 - 40625755-40626268,40626358-40626599,40627034-406274... 51 1e-06
04_03_0793 + 19699355-19699472,19700245-19700633,19700824-197010... 50 1e-06
06_01_0540 - 3871347-3872072,3872784-3872997,3873088-3873320,387... 50 2e-06
06_01_0530 - 3833291-3834016,3834728-3834941,3835032-3835264,383... 50 2e-06
06_03_1144 - 27980216-27980896,27981682-27982048,27983499-279836... 49 5e-06
07_01_0636 + 4761858-4762421,4763596-4763819,4763961-4764309,476... 48 8e-06
01_07_0033 - 40619145-40619658,40619761-40620002,40620178-406205... 48 8e-06
06_03_0870 + 25557988-25558309,25558798-25559011,25559110-255593... 48 1e-05
01_06_1094 - 34478538-34478624,34478860-34478931,34479154-344792... 47 2e-05
07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026 45 6e-05
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396... 45 7e-05
03_01_0053 + 457622-458191,458328-458393,458734-458978,459393-45... 44 1e-04
10_08_0270 + 16378878-16380566 43 3e-04
01_06_1835 + 40223645-40224148,40224893-40225189,40225344-402254... 42 5e-04
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094... 42 7e-04
11_01_0156 - 1290361-1290876,1291095-1291201,1292027-1292105,129... 39 0.005
04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577 39 0.005
10_08_0271 - 16382655-16384451 38 0.006
03_02_0850 + 11775232-11776077,11776761-11777321 38 0.011
12_02_0848 + 23636478-23638058 35 0.060
10_08_0268 - 16347683-16349089 33 0.18
12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691 33 0.32
06_02_0254 - 13517352-13517557,13517612-13519073 31 0.74
10_08_0267 - 16333239-16333820,16333904-16334842,16334920-163351... 31 0.98
05_01_0217 + 1630083-1630205,1630467-1630710,1631695-1632508,163... 31 0.98
10_08_0873 + 21202630-21204021 31 1.3
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359... 29 3.0
03_01_0312 + 2469096-2470862 29 3.9
03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865 29 5.2
02_05_0076 + 25637752-25639062,25639221-25639297,25640962-256410... 29 5.2
>02_01_0650 -
4838977-4839078,4839179-4839196,4839371-4839528,
4839663-4839895,4840345-4840631,4841391-4841819
Length = 408
Score = 61.3 bits (142), Expect = 8e-10
Identities = 25/83 (30%), Positives = 51/83 (61%)
Frame = +3
Query: 330 YEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADE 509
Y++ ++ FCI G ++ S R +++ GC+PV+LS+ + LPF++ +DWR+ + E
Sbjct: 283 YQKQFYHTKFCICPGGSQVNSARISDSIHYGCVPVILSDYYDLPFNDILDWRKFAVVLKE 342
Query: 510 RLLLQVPELVRSVPPERILALRQ 578
R + Q+ +++S+ E + L +
Sbjct: 343 RDVYQLKSILKSISQEEFVELHK 365
>01_01_0054 +
411675-411911,412097-412213,412401-412439,412703-412839,
413322-413670,413815-414495
Length = 519
Score = 61.3 bits (142), Expect = 8e-10
Identities = 26/121 (21%), Positives = 67/121 (55%)
Frame = +3
Query: 321 KFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIW 500
+ +Y Q + +S +CI G + S R +EA+ C+PV++++ + LPFD+ ++W +
Sbjct: 395 RMNYIQHMKSSKYCICPMGYEVNSPRIVEAIYYECVPVIIADNFVLPFDDALNWSAFSVV 454
Query: 501 ADERLLLQVPELVRSVPPERILALRQQTQFLWEQYFSSIEKIVFTTIEILLERVLAHRVS 680
E+ + ++ +++ ++P ++ +A++ Q + + + I + ++L + RV+
Sbjct: 455 IPEKDVPKLKQILLAIPDDQYMAMQSNVQRVQKHFIWHPNPIKYDIFHMILHSIWYSRVN 514
Query: 681 K 683
+
Sbjct: 515 Q 515
>02_04_0594 -
24182946-24183641,24184122-24184476,24184553-24184743,
24184840-24185046
Length = 482
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = +3
Query: 327 DYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWAD 506
DY +A + FC+ G + S R +E++ AGC+PV++S G+ PF + +DW + +
Sbjct: 360 DYHAQMAAARFCLCPSGFEVASPRVVESVFAGCVPVIISEGYPPPFGDVLDWGKMSVAVP 419
Query: 507 ERLLLQVPELVRSVPPERILALR 575
+ ++ ++R V R LR
Sbjct: 420 AARIPELRAILRRVSERRYRVLR 442
>01_06_0026 + 25738960-25739075,25740385-25740733,25740825-25741511
Length = 383
Score = 54.8 bits (126), Expect = 7e-08
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 9/206 (4%)
Frame = +3
Query: 6 LARASASEIMFREGFDISLPLFHKEHPEKGGVPPAATVNPFPAQRKHLVAFKGKRYVHGI 185
L A +SE +F G D+SLP P + P V P R+ ++AF VHG
Sbjct: 174 LCNADSSEGIFTPGRDVSLPETTIRTPRR----PLRYVGGLPVSRRGILAFFAGN-VHG- 227
Query: 186 GSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDN----KEYDKFDYEQLLANS 353
R L K W D RD+ + + Y Q + NS
Sbjct: 228 --RVRPVLL-----------------KHWGDGRDDDMRVYGPLPARVSRRMSYIQHMKNS 268
Query: 354 TFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPE 533
FC+ G + S R +EAL C+PV++++ + LP + +DW + E+ + + +
Sbjct: 269 RFCLCPMGYEVNSPRIVEALYYECVPVIIADNFVLPLSDVLDWSAFAVVVAEKDVPDLKK 328
Query: 534 LVRSVPPERILAL-----RQQTQFLW 596
+++ + + +A+ R Q FLW
Sbjct: 329 ILQGITLRKYVAMHGCVKRLQRHFLW 354
>10_02_0089 -
5138048-5138561,5138864-5139105,5139712-5140079,
5140862-5140943
Length = 401
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/99 (27%), Positives = 53/99 (53%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ ++ + + ++ + YE + + FC+ G S R +EA+ GCIPV++++
Sbjct: 238 WENFKNNPMFDISTDHPQTYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 296
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ E + Q+ ++ S+P E IL
Sbjct: 297 IVLPFSDAIPWEEIAVFVAEDDVPQLDTILTSIPTEVIL 335
>02_04_0022 -
18992517-18993033,18993119-18993360,18993535-18993923,
18995447-18995603
Length = 434
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/99 (28%), Positives = 53/99 (53%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ ++ + + E+ YE + S FC+ G S R +EA+ GCIPV++++
Sbjct: 270 WENFKNNPLFDISTEHPATYYEDM-QRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 328
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ DE + ++ ++ S+P + IL
Sbjct: 329 IVLPFADAIPWDEIGVFVDEEDVPRLDSILTSIPIDDIL 367
>01_07_0032 - 40608330-40609474,40611524-40611647
Length = 422
Score = 51.2 bits (117), Expect = 9e-07
Identities = 26/99 (26%), Positives = 52/99 (52%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ +D + + E+ YE + + FC+ G S R +EA+ GCIPV++++
Sbjct: 259 WENFKDNPLFDISTEHPATYYEDM-QRAIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 317
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ E + ++ ++ SVP + ++
Sbjct: 318 IVLPFADAIPWGEISVFVAEEDVPRLDTILASVPLDEVI 356
>04_01_0055 +
576483-576584,576684-576865,576950-577316,577391-578065
Length = 441
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/84 (26%), Positives = 44/84 (52%)
Frame = +3
Query: 327 DYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWAD 506
DY + + FC+ G + S R +EA+ A C+PV++++G+ LPF + + W +
Sbjct: 319 DYYSFMRRARFCLCPSGHEVASPRVVEAIQAECVPVVIADGYALPFADVLRWEAFSVAVA 378
Query: 507 ERLLLQVPELVRSVPPERILALRQ 578
+ ++ E + +P + LR+
Sbjct: 379 VGDIPRLRERLERIPAAEVERLRR 402
>01_07_0034 -
40625755-40626268,40626358-40626599,40627034-40627422,
40628119-40628227
Length = 417
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/99 (26%), Positives = 52/99 (52%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ ++ + + ++ YE + S FC+ G S R +EA+ GCIPV++++
Sbjct: 254 WENFKNNPLFDISTDHPPTYYEDM-QRSVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 312
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ E + ++ ++ S+P + IL
Sbjct: 313 IVLPFADAIPWEEIGVFVAEEDVPKLDSILTSIPTDVIL 351
>04_03_0793 +
19699355-19699472,19700245-19700633,19700824-19701065,
19701150-19701663
Length = 420
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/99 (25%), Positives = 54/99 (54%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ ++ + + ++ YE + + FC+ G S R +EA+ GCIPV++++
Sbjct: 257 WENFKNNPLFDISTDHPPTYYEDM-QRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 315
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ +E+ + ++ ++ S+P + IL
Sbjct: 316 IVLPFADAIPWEEIGVFVEEKDVPKLDTILTSMPIDDIL 354
>06_01_0540 -
3871347-3872072,3872784-3872997,3873088-3873320,
3873409-3873561
Length = 441
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +3
Query: 330 YEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADE 509
Y + S FC+ G + S R +EA+ AGC+PV++++G+ PF + + W +
Sbjct: 319 YYWYMRRSRFCLCPSGHEVASPRVVEAIHAGCVPVVVADGYAPPFADVLRWEAFSVAVAV 378
Query: 510 RLLLQVPELVRSVPPERILALR 575
+ ++ EL+ +P + LR
Sbjct: 379 ADVPRLRELLERIPAPEVERLR 400
>06_01_0530 -
3833291-3834016,3834728-3834941,3835032-3835264,
3835353-3835505
Length = 441
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +3
Query: 330 YEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADE 509
Y + S FC+ G + S R +EA+ AGC+PV++++G+ PF + + W +
Sbjct: 319 YYWYMRRSRFCLCPSGHEVASPRVVEAIHAGCVPVVVADGYAPPFADVLRWEAFSVAVAV 378
Query: 510 RLLLQVPELVRSVPPERILALR 575
+ ++ EL+ +P + LR
Sbjct: 379 ADVPRLRELLERIPAPEVERLR 400
>06_03_1144 -
27980216-27980896,27981682-27982048,27983499-27983644,
27983872-27984111
Length = 477
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = +3
Query: 282 RDERCEEDNKEYDKFDYEQLLANSTFCIV----ARGRRLGSYRFLEALAAGCIPVLLSN- 446
RD+R + D+ +L+ + FC+ G S R +EA+ AGC+PVL+ +
Sbjct: 334 RDDRVVVYGRLPAGVDHGELMRRARFCLCPCGGGEGAAAASRRVVEAITAGCVPVLVDDG 393
Query: 447 GWRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQQ 581
G+ PF + +DW R + + ++ +++ V R LR++
Sbjct: 394 GYSPPFSDVLDWARFSVAVPAERVGEIKDILGGVSDRRYGVLRRR 438
>07_01_0636 +
4761858-4762421,4763596-4763819,4763961-4764309,
4764648-4765331
Length = 606
Score = 48.0 bits (109), Expect = 8e-06
Identities = 20/95 (21%), Positives = 50/95 (52%)
Frame = +3
Query: 330 YEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADE 509
Y ++ S FC+ G + S R +EA+ C+PV++ + + LPF + ++W +
Sbjct: 481 YTDMMRRSRFCLCPSGYEVASPRVVEAIYLECVPVVIGDDYTLPFADVLNWAAFSVRVAV 540
Query: 510 RLLLQVPELVRSVPPERILALRQQTQFLWEQYFSS 614
+ ++ E++ +V P + + ++++ + + + S
Sbjct: 541 GDIPRLKEILAAVSPRQYIRMQRRVRAVRRHFMVS 575
>01_07_0033 -
40619145-40619658,40619761-40620002,40620178-40620566,
40621586-40621688
Length = 415
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/99 (26%), Positives = 52/99 (52%)
Frame = +3
Query: 270 WKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG 449
W++ ++ + + ++ YE + S FC+ G S R +EA+ GCIPV++++
Sbjct: 252 WENFKNNPLFDISTDHPPTYYEDM-QRSIFCLCPLGWAPWSPRLVEAVVFGCIPVIIADD 310
Query: 450 WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERIL 566
LPF + I W ++ E + ++ ++ S+P + IL
Sbjct: 311 IVLPFADAIPWDEIGVFVAEDDVPKLDTILTSIPMDVIL 349
>06_03_0870 +
25557988-25558309,25558798-25559011,25559110-25559342,
25559473-25559630,25559900-25560001
Length = 342
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +3
Query: 306 NKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWR 485
N+ Y++ + FC+ G ++ S R +++ GC+PV+LS+ + L F ++WR
Sbjct: 215 NRAIGNLVYQKHFFRTKFCVCPGGSQVNSARISDSIHYGCMPVILSDYYDLRFSGILNWR 274
Query: 486 RAVIWADERLLLQVPELVRSVPPERILALRQ---QTQFLWEQYFSSIEKIVFTTIEILLE 656
+ + E + ++ +++S+ + ++L + Q Q +E + + F I+ E
Sbjct: 275 KFAVVLKESDVYELKSILKSLSQKEFVSLHKSLVQVQKHFEWHSPPVPYDAFHM--IMYE 332
Query: 657 RVLAHRVSK 683
L H V K
Sbjct: 333 LWLRHHVIK 341
>01_06_1094 -
34478538-34478624,34478860-34478931,34479154-34479222,
34479312-34479422,34480390-34480528,34480590-34480705,
34480821-34480968,34481058-34481215,34481654-34481827,
34482592-34483056
Length = 512
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Frame = +3
Query: 342 LANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLL 521
+ S FC+ G S R +A+ +GCIPV++S+ LPF+ +D+R+ ++ +
Sbjct: 352 MRKSLFCLNPAGDTPSSARLFDAIVSGCIPVIVSDELELPFEGILDYRKIALFVSSNDAV 411
Query: 522 QVPELV---RSVPPERI 563
Q LV RS+ +RI
Sbjct: 412 QPGWLVKYLRSIDAKRI 428
>07_03_0932 + 22726529-22727338,22729097-22729462,22729841-22730026
Length = 453
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Frame = +3
Query: 348 NSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQ- 524
+S FC+ G + R +AL + C+PV++S+ LPF++ ID+R I+ + +Q
Sbjct: 309 SSKFCLHPAGDTPSACRLFDALVSLCVPVIVSDYIELPFEDVIDYRNISIFVETSKAVQP 368
Query: 525 --VPELVRSVPPERILALRQQTQFLWEQYF 608
+ +R + +RIL +++ + + + YF
Sbjct: 369 GFLTSTLRGISSQRILEYQREIKKV-KHYF 397
>03_01_0527 +
3960982-3961290,3961371-3961464,3961898-3962084,
3962194-3962449,3962561-3962773,3962856-3962942,
3963089-3963223,3963296-3963409,3963507-3963754,
3963824-3963904,3963979-3964210,3964340-3964438,
3964513-3964701,3964928-3965023
Length = 779
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/93 (23%), Positives = 50/93 (53%)
Frame = +3
Query: 330 YEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADE 509
Y + LA+S FC V G S R +++ GCIPV++ +G LP++ +++ + E
Sbjct: 616 YYEELASSIFCGVLPGDGW-SGRMEDSMLQGCIPVIIQDGILLPYENMLNYNSFAVRIQE 674
Query: 510 RLLLQVPELVRSVPPERILALRQQTQFLWEQYF 608
+ + ++R + ++ + + + +W+++F
Sbjct: 675 DDIPNLIRILRGINETQVEFMLRNVRQIWQRFF 707
>03_01_0053 +
457622-458191,458328-458393,458734-458978,459393-459861
Length = 449
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 327 DYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDW 482
+Y +A S FC+ G S R +E++ GCIPV++++ RLPF + W
Sbjct: 319 NYRSEMARSLFCLCPLGWAPWSPRLVESVLLGCIPVIIADDIRLPFPSVLQW 370
>10_08_0270 + 16378878-16380566
Length = 562
Score = 42.7 bits (96), Expect = 3e-04
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Frame = +3
Query: 240 LVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAA 419
L+T CR S L + R NK Y +L +STFC+ +G +A+ A
Sbjct: 363 LITQCR-ASSACSLMECRDGPSNKCGSAASYMRLFQSSTFCLQPQGDSYTRKSAFDAMLA 421
Query: 420 GCIPVLLSNG-------WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 578
GCIPV G W LP + D+ + D R + E +R + P + +R+
Sbjct: 422 GCIPVFFHPGTAYVQYTWHLPRNH-ADYSVYISEDDVRRNASIEERLRRIAPAAVERMRE 480
>01_06_1835 +
40223645-40224148,40224893-40225189,40225344-40225439,
40225595-40225748,40225773-40226011
Length = 429
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +3
Query: 342 LANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLL 521
+ +S FC+ G S R +A+ + C+PV++S+ LPF+++ID+ + D LL
Sbjct: 304 MRSSKFCLHPAGDTPSSCRLFDAIVSHCVPVIVSSRIELPFEDEIDYMEEALRPD-YLLN 362
Query: 522 QVPELVRS 545
Q+ ++ ++
Sbjct: 363 QLRQIQKT 370
>08_02_0797 +
21307534-21307639,21307907-21308988,21309385-21309432,
21309705-21310217
Length = 582
Score = 41.5 bits (93), Expect = 7e-04
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 342 LANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDW 482
+A+S FC+ G S R +A+ + C+PV++S+ LPF++ +D+
Sbjct: 449 MASSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDDIELPFEDVLDY 495
>11_01_0156 -
1290361-1290876,1291095-1291201,1292027-1292105,
1292609-1293523
Length = 538
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +3
Query: 351 STFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIW 500
S FC+ G S R +A+ + C+PV++S+ LP+++ +D+ + I+
Sbjct: 407 SKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDDIELPYEDALDYSKFSIF 456
>04_04_1540 - 34245246-34245797,34246904-34247157,34247989-34248577
Length = 464
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +3
Query: 342 LANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIW 500
+ S FC+ G S R +A+A+ CIPV++S+ LPF+ ID+ I+
Sbjct: 318 MRTSEFCLHPAGDTPTSCRLFDAVASLCIPVIVSDEIELPFEGMIDYTEFAIF 370
>10_08_0271 - 16382655-16384451
Length = 598
Score = 38.3 bits (85), Expect = 0.006
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Frame = +3
Query: 240 LVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAA 419
L+ CR S L + NK Y +L +STFC+ +G +A+ A
Sbjct: 399 LIAQCR-ASSVCSLMECADGPSNKCGSPASYMRLFQSSTFCLQPQGDSYTRKSAFDAMLA 457
Query: 420 GCIPVLLSNG-------WRLPFDEKIDWRRAVIWADERLLLQVPELVRSVPPERILALRQ 578
GCIPV G W LP + D+ + D R + E +R + P + +R+
Sbjct: 458 GCIPVFFHPGTAYVQYTWHLPRNH-ADYSVYISEDDVRRNASIEERLRRIAPAAVERMRE 516
>03_02_0850 + 11775232-11776077,11776761-11777321
Length = 468
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +3
Query: 351 STFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVI 497
S FC+ G S R +++ + C+P+++S+ LPF++ +D+ + I
Sbjct: 322 SKFCLNIAGDTPSSNRLFDSIVSHCVPIIISDEIELPFEDVLDYSKFCI 370
>12_02_0848 + 23636478-23638058
Length = 526
Score = 35.1 bits (77), Expect = 0.060
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Frame = +3
Query: 315 YDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG-------WRLPFDEK 473
YD + +L ++ FC+ RG +A+ AGC+PV G W LP D
Sbjct: 369 YDPGNVMRLFKSAAFCLQPRGDSYTRRSVFDAILAGCVPVFFHPGSAYTQYRWHLPRDHA 428
Query: 474 IDWRRAVIWADERLLLQVPELVRSVPPERILALRQQ 581
+++ +++R V R+ A+R+Q
Sbjct: 429 AYSVFVPEDGVRNGTVRLEDVLRRVSAARVAAMREQ 464
>10_08_0268 - 16347683-16349089
Length = 468
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Frame = +3
Query: 336 QLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNG-------WRLPFDEKIDWRRAV 494
++ +S FC+ RG + +A+ AGCIPV G LP E+ W +
Sbjct: 333 RVFESSRFCLEPRGDTMTRRSTFDAILAGCIPVFFHPGSAYTQYTLHLP-PERGGWSVLI 391
Query: 495 IWAD-ERLLLQVPELVRSVPPERILALRQQ 581
AD + + E + ++ PE++ ++R++
Sbjct: 392 PHADVTGRNVSIEETLAAISPEKVRSMREE 421
>12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691
Length = 461
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +3
Query: 390 SYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIW 500
S R +A+ + C+PV++S+ LP+++ +D+ + I+
Sbjct: 344 SNRLFDAIVSHCVPVIISDDIELPYEDALDYSKFSIF 380
>06_02_0254 - 13517352-13517557,13517612-13519073
Length = 555
Score = 31.5 bits (68), Expect = 0.74
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Frame = +3
Query: 276 DLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLL----- 440
D R RC +D + L S FC+ RG + + AG +PVL
Sbjct: 337 DCRGTRCNDDGAAVMR-----LFMGSRFCLQPRGDSFTRRSLFDCMVAGAVPVLFWRRTA 391
Query: 441 --SNGWRLPFDEKIDWRRAVIWADERLL----LQVPELVRSVPPERILALRQQ 581
+ W LP E+ +W ++ D R L + V +++ R+ +R++
Sbjct: 392 YDAYRWFLPRGEEGEWS---VFIDRRALRVGNVSVRDVLEGYSERRVRRMRER 441
>10_08_0267 -
16333239-16333820,16333904-16334842,16334920-16335172,
16336837-16337063,16338189-16339388
Length = 1066
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 336 QLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLL 440
+LL ++ FC+ RG +++ AGCIPV L
Sbjct: 337 ELLESAAFCVQPRGDSYTRKSTFDSMLAGCIPVFL 371
>05_01_0217 +
1630083-1630205,1630467-1630710,1631695-1632508,
1632775-1632844,1633007-1633239,1633345-1633564
Length = 567
Score = 31.1 bits (67), Expect = 0.98
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 189 SETRNSLWHLHDGNNLIL---VTTCRHGKSWKDLRDERCEEDNKEYDK 323
+E S+ H DG+ ++L + RH K WKD + C +KE D+
Sbjct: 455 AEAAASVAHTLDGHRILLCSEIERLRHYKQWKDKWNNPCSRLSKEKDQ 502
>10_08_0873 + 21202630-21204021
Length = 463
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Frame = +3
Query: 294 CEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSN-------GW 452
C +D Y + + +S FC+ G +A+ AGC+PV + GW
Sbjct: 297 CSGGRCSHDPIRYMRPMLHSRFCLQPPGDTPTRRSTFDAILAGCVPVFFEDAAARRQYGW 356
Query: 453 RLP 461
LP
Sbjct: 357 HLP 359
>06_01_0503 -
3596664-3596837,3597647-3598069,3598362-3598595,
3598720-3598993,3599390-3599523,3599572-3599634,
3599759-3599846,3599919-3599989,3600898-3601010,
3601836-3602004,3602580-3602671,3602819-3603295,
3603736-3604090
Length = 888
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 126 FPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLR 284
F RK L+ + K+ GI E S W LH G + V RH S DLR
Sbjct: 701 FYRSRKDLIESQLKKIQDGIAEEILISSWELHQGTSCRGVNWDRH--SLTDLR 751
>03_01_0312 + 2469096-2470862
Length = 588
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = +3
Query: 240 LVTTCRHGKSWK----DLRDERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLE 407
L+ CR K DL + +C + + F NS FC+ +G +
Sbjct: 362 LIDQCRTSSVCKLLECDLGESKCHSPSAIMNMFQ------NSLFCLQPQGDSYTRRSAFD 415
Query: 408 ALAAGCIPVLLSNG-------WRLPFDEKIDWRRAVIWADERLL---LQVPELVRSVPPE 557
++ AGCIPV G W LP K R +V ++ + + + + ++S+ P+
Sbjct: 416 SMLAGCIPVFFHPGSAYVQYTWHLP---KNYTRYSVFIPEDGVRKGNVSIEDRLKSIHPD 472
Query: 558 RILALRQQ 581
+ +R++
Sbjct: 473 MVKKMREE 480
>03_01_0310 + 2445870-2446242,2447976-2448079,2448396-2449865
Length = 648
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 336 QLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSN 446
+L +TFC+ G +++ AGCIPV N
Sbjct: 496 RLFQKATFCLQPPGDSYTRRSVFDSMVAGCIPVFFHN 532
>02_05_0076 +
25637752-25639062,25639221-25639297,25640962-25641095,
25641178-25641242,25641431-25641482,25641912-25641994,
25642128-25642221,25642332-25642861
Length = 781
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -3
Query: 181 PCTYLFPLKATKCLR*AGNGLTVAAGGTPPFSGCSL*NNGNEMSNPSRNIISE 23
PC + PL ++ R +G T A+ PP G L +++S+ + + E
Sbjct: 98 PCDAVGPLPSSPVARSRSSGATPASAAKPPLGGGRLRGASSDVSDATLEAVEE 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,185,414
Number of Sequences: 37544
Number of extensions: 423441
Number of successful extensions: 1260
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -