Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1039
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical pr... 237 5e-63
U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exosto... 237 5e-63
AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfa... 237 5e-63
Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical pr... 62 5e-10
U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exosto... 62 5e-10
AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfa... 62 5e-10
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 35 0.054
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 35 0.054
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 35 0.054
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 35 0.054
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 35 0.054
Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical pr... 35 0.054
AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B... 35 0.054
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 35 0.071
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 31 0.66
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 31 0.66
U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine rece... 30 1.5
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical ... 29 4.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 6.2
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 28 6.2
U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z73425-6|CAB61014.1| 382|Caenorhabditis elegans Hypothetical
protein F12F6.3 protein.
Length = 382
Score = 237 bits (581), Expect = 5e-63
Identities = 108/221 (48%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 ILARASASEIMFREGFDISLPLFHKEHP-EKGGVPPAATVNPFPAQRKHLVAFKGKRYVH 179
++ARAS+SE F + FD+SLPLFH+ HP E + QRK+LV+FKGKRYV+
Sbjct: 152 MIARASSSENNFIKVFDVSLPLFHENHPYEIKESKSERNDDRIENQRKYLVSFKGKRYVY 211
Query: 180 GIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTF 359
GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y++LLANSTF
Sbjct: 212 GIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEYDELLANSTF 271
Query: 360 CIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELV 539
C+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L +PEL+
Sbjct: 272 CLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALSIPELL 331
Query: 540 RSVPPERILALRQQTQFLWEQYFSSIEKIVFTTIEILLERV 662
S R+ LR+ + +++ Y SI+ I + I+ +R+
Sbjct: 332 MSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRI 372
>U94834-1|AAC47509.1| 378|Caenorhabditis elegans multiple exostoses
homolog 1 protein.
Length = 378
Score = 237 bits (581), Expect = 5e-63
Identities = 108/221 (48%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 ILARASASEIMFREGFDISLPLFHKEHP-EKGGVPPAATVNPFPAQRKHLVAFKGKRYVH 179
++ARAS+SE F + FD+SLPLFH+ HP E + QRK+LV+FKGKRYV+
Sbjct: 148 MIARASSSENNFIKVFDVSLPLFHENHPYEIKESKSERNDDRIENQRKYLVSFKGKRYVY 207
Query: 180 GIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTF 359
GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y++LLANSTF
Sbjct: 208 GIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEYDELLANSTF 267
Query: 360 CIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELV 539
C+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L +PEL+
Sbjct: 268 CLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALSIPELL 327
Query: 540 RSVPPERILALRQQTQFLWEQYFSSIEKIVFTTIEILLERV 662
S R+ LR+ + +++ Y SI+ I + I+ +R+
Sbjct: 328 MSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRI 368
>AB241458-1|BAF48989.1| 382|Caenorhabditis elegans heparan sulfate
polymerase protein.
Length = 382
Score = 237 bits (581), Expect = 5e-63
Identities = 108/221 (48%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Frame = +3
Query: 3 ILARASASEIMFREGFDISLPLFHKEHP-EKGGVPPAATVNPFPAQRKHLVAFKGKRYVH 179
++ARAS+SE F + FD+SLPLFH+ HP E + QRK+LV+FKGKRYV+
Sbjct: 152 MIARASSSENNFIKVFDVSLPLFHENHPYEIKESKSERNDDRIENQRKYLVSFKGKRYVY 211
Query: 180 GIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRDERCEEDNKEYDKFDYEQLLANSTF 359
GIGS TRN + HLH+G+++++VTTC+H W+ +D+RC+ DN EYD+++Y++LLANSTF
Sbjct: 212 GIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEYDELLANSTF 271
Query: 360 CIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDEKIDWRRAVIWADERLLLQVPELV 539
C+V RGRRLGS+RFLE L +GC+PV++S+ W LPF E IDW A I ER L +PEL+
Sbjct: 272 CLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALSIPELL 331
Query: 540 RSVPPERILALRQQTQFLWEQYFSSIEKIVFTTIEILLERV 662
S R+ LR+ + +++ Y SI+ I + I+ +R+
Sbjct: 332 MSTSRRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRI 372
>Z92803-8|CAB07245.1| 814|Caenorhabditis elegans Hypothetical
protein K01G5.6 protein.
Length = 814
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +3
Query: 291 RCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDE 470
+C ++N ++ QL+ +STFC + FL +L GCIP++LSN LPF +
Sbjct: 317 KCSQENCSLER--RRQLIGSSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQD 373
Query: 471 KIDWRRAVIWADERLLLQVPELVRSVPPERILALRQQTQFLWEQYFS 611
IDWRRA L + +V+S I+ +R+ + +E Y +
Sbjct: 374 LIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRVGRLFYETYLA 420
>U94835-1|AAC47510.1| 814|Caenorhabditis elegans multiple exostoses
homolog 2 protein.
Length = 814
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +3
Query: 291 RCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDE 470
+C ++N ++ QL+ +STFC + FL +L GCIP++LSN LPF +
Sbjct: 317 KCSQENCSLER--RRQLIGSSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQD 373
Query: 471 KIDWRRAVIWADERLLLQVPELVRSVPPERILALRQQTQFLWEQYFS 611
IDWRRA L + +V+S I+ +R+ + +E Y +
Sbjct: 374 LIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRVGRLFYETYLA 420
>AB077851-1|BAB83878.1| 814|Caenorhabditis elegans heparan sulfate
GlcNAc transferase-I/II protein.
Length = 814
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +3
Query: 291 RCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAAGCIPVLLSNGWRLPFDE 470
+C ++N ++ QL+ +STFC + FL +L GCIP++LSN LPF +
Sbjct: 317 KCSQENCSLER--RRQLIGSSTFCFLLPSEMFFQ-DFLSSLQLGCIPIILSNSQLLPFQD 373
Query: 471 KIDWRRAVIWADERLLLQVPELVRSVPPERILALRQQTQFLWEQYFS 611
IDWRRA L + +V+S I+ +R+ + +E Y +
Sbjct: 374 LIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRVGRLFYETYLA 420
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 486 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 543
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 544 PECIYCKLTFPN 555
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 44 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 101
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 102 PECIYCKLTFPN 113
>Z68108-5|CAD44152.2| 725|Caenorhabditis elegans Hypothetical
protein T05A10.1b protein.
Length = 725
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 566
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 567 PECIYCKLTFPN 578
>AY390537-1|AAQ94949.1| 692|Caenorhabditis elegans SMA-9 class B
protein.
Length = 692
Score = 35.1 bits (77), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 509 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 566
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 567 PECIYCKLTFPN 578
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 34.7 bits (76), Expect = 0.071
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 556 SGGTERTSSGTCNNKRSSAQITARLQSIFSSKGNLHPLLSKTGIHPAAKASRNL*DPNRL 377
SGG+ RTS G +++ Q +R QS+F G+ H + S T P + + DPN
Sbjct: 66 SGGSTRTSPGPKDSRM--LQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQAHNDPNYT 123
Query: 376 PRATMQKVELAN 341
P K+ N
Sbjct: 124 PERIYCKLTFPN 135
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 574 LSARMRSGGTERTSSGTCNNKRSSAQITA--RLQSIFSSKGNLHPLLSKTGIHPAAKASR 401
+ + R+ GT S+ T + S + A R QS+F G+ H + S T P + +
Sbjct: 408 MQLQQRADGTPNGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQ 467
Query: 400 NL*DPNRLPRATMQKVELAN 341
DPN P K+ N
Sbjct: 468 AHNDPNYTPECIYCKLTFPN 487
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 31.5 bits (68), Expect = 0.66
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 574 LSARMRSGGTERTSSGTCNNKRSSAQITA--RLQSIFSSKGNLHPLLSKTGIHPAAKASR 401
+ + R+ GT S+ T + S + A R QS+F G+ H + S T P + +
Sbjct: 408 MQLQQRADGTPNGSTRTSPGPKDSRMLQAASRSQSLFELSGSKHFMGSLTSGQPLLRPIQ 467
Query: 400 NL*DPNRLPRATMQKVELAN 341
DPN P K+ N
Sbjct: 468 AHNDPNYTPECIYCKLTFPN 487
>U64609-4|AAB04601.3| 336|Caenorhabditis elegans Serpentine
receptor, class m protein2 protein.
Length = 336
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 585 QFLWEQYFSSIEKIVFTTIEILLERVLAHRVSKQRDLLILE 707
+F W QY+ +I +++F+ + ++ L + VSK + L I++
Sbjct: 46 EFQWTQYYVAILRLIFSMVVVVTSPTLVY-VSKMKSLYIVK 85
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = +3
Query: 87 EKGGVPPAATVNPF-----PAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTT 251
EKG PP + +N + A H +++ S RN LW+ G + L ++
Sbjct: 569 EKGDTPPYSIINNYFSIGVDASIAHRFHVMREKFPEKFNSRMRNKLWYFELGTSETLSSS 628
Query: 252 CRH 260
C++
Sbjct: 629 CKN 631
>Z35641-1|CAA84706.2| 863|Caenorhabditis elegans Hypothetical
protein C38H2.1 protein.
Length = 863
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 198 RNSLWHLHDGNNLILVTTCR--HGKSWKDLRDERCEEDNKEYDKFDY 332
R L HL D LI C K WK R E EE+ KE+ K Y
Sbjct: 494 RTHLLHLVDTKTLICDDDCDPVDEKFWKQARAEPTEENEKEFLKRVY 540
>AF036701-6|AAK68607.1| 139|Caenorhabditis elegans Hypothetical
protein ZC416.1 protein.
Length = 139
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 198 RNSLWHLHDGNNLILVTTCRHGKS-WKDLRDERCEEDNKE 314
RNS W+ N L TT H K+ WK LRD +E+ KE
Sbjct: 77 RNSAWNEIAEN---LETTSEHVKTRWKTLRDRYKKEEKKE 113
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 321 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 181
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 136 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 178
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 321 CHILYCPLHIFHLLNLSKIFHDGKWLLRSSYFHHVNATKNYGFHYQY 181
C + CPL +L + IFHD K+ + H N ++YG+ Y
Sbjct: 45 CEAMLCPLERVQVLLQTTIFHD-KF---KNTLHTFNRLRDYGYREYY 87
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 28.3 bits (60), Expect = 6.2
Identities = 27/104 (25%), Positives = 45/104 (43%)
Frame = +3
Query: 108 AATVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLILVTTCRHGKSWKDLRD 287
AA+ P + +K+ + KR S T +S H+GN+ T K K +RD
Sbjct: 304 AASATPPTSSKKNGIH---KRNGDVTSSTTTSSRKKKHNGNSGFNSTPPNDKKKGKSIRD 360
Query: 288 ERCEEDNKEYDKFDYEQLLANSTFCIVARGRRLGSYRFLEALAA 419
++ + D + Y ++ST RG + RF+ + AA
Sbjct: 361 VDMDDGDDSDDDYSYRD-TSSSTIEDQRRGGGISIIRFIFSSAA 403
>U70853-2|AAM97995.1| 228|Caenorhabditis elegans Hypothetical
protein M01H9.5 protein.
Length = 228
Score = 28.3 bits (60), Expect = 6.2
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = +3
Query: 72 HKEHPEKGGVPPAA---TVNPFPAQRKHLVAFKGKRYVHGIGSETRNSLWHLHDGNNLIL 242
HKE PE+ PP T NP P K L KR+V +G H GN ++
Sbjct: 129 HKETPERLSTPPGMIINTENPIPHLSKKLK--NAKRHVKFVGKARARR----HIGNVVVE 182
Query: 243 VTTCRH 260
C H
Sbjct: 183 SGQCDH 188
>Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical
protein ZC518.4 protein.
Length = 240
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -3
Query: 631 KTIFSIDEKYCSHKN*VCCLSARMRSGGTERTSSGTCNNKRSSAQITARLQSIFSSK 461
KT+FS K+ SHK+ CLS + + R S T + S+ ++L +IF+ K
Sbjct: 135 KTLFSPSSKHVSHKSPGQCLSILISLPASPRAISDTKTIRLSN---VSKLPTIFTLK 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,874
Number of Sequences: 27780
Number of extensions: 369366
Number of successful extensions: 1072
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1069
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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