Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1038
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 124 6e-29
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 124 6e-29
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 124 6e-29
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 124 6e-29
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 124 6e-29
12_02_1282 + 27528159-27529148,27529549-27529614 123 8e-29
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 123 8e-29
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 123 8e-29
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 123 1e-28
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 122 2e-28
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 70 1e-12
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 42 3e-04
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 40 0.001
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 40 0.001
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 39 0.002
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 38 0.004
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 35 0.049
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 31 0.46
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 31 0.80
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 29 1.8
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 124 bits (298), Expect = 6e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 124 bits (298), Expect = 6e-29
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 7 QPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKRGIL 66
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 67 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEDHPVLLTEAPLNPKANREKM 120
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 118 EKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDG 159
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 124 bits (298), Expect = 6e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 124 bits (298), Expect = 6e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 124 bits (298), Expect = 6e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 123 bits (297), Expect = 8e-29
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 123 bits (297), Expect = 8e-29
Identities = 54/115 (46%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HP+LLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 123 bits (297), Expect = 8e-29
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 7 QPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 66
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HPVLLTEAP+NP N K+
Sbjct: 67 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPMNPKANREKM 120
Score = 50.4 bits (115), Expect = 9e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 118 EKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDG 159
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 123 bits (296), Expect = 1e-28
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HP+LLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GR LDSGDG
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRIV---LDSGDG 157
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 122 bits (294), Expect = 2e-28
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HP LLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPALLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 7e-07
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F + VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 70.1 bits (164), Expect = 1e-12
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRP--XHTRVMAGALXGXIFXGPRAEEHRGLL 265
V DNG+G +K GFAG+ P P +GRP + + I G + R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
+ YP +G V W+DM IW++ +L +LLT+ PLNP +N K+
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDH-AFYSELKVDPSECKILLTDPPLNPVKNREKM 120
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK E F F+ + AVL LYA G TG +DSGDG
Sbjct: 118 EKMIETMFEKYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDG 159
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK AE F VPA FL+ AVL +A+GR T +DSG G
Sbjct: 184 EKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGG 225
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 224 IFXGPRAEEHRGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPL 403
++ G E R + + P G VTDW+ ++ IWN+ +L HP+L+ E
Sbjct: 119 LYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNH-AFRQRLLINPEEHPMLIAEPST 177
Query: 404 NPXRNTRK 427
N + K
Sbjct: 178 NTGQQREK 185
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPN 169
+ ID GS KAG+AGD PK P+
Sbjct: 10 IVIDVGSYSCKAGYAGDDTPKAVFPS 35
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 40.3 bits (90), Expect = 0.001
Identities = 39/134 (29%), Positives = 54/134 (40%), Gaps = 22/134 (16%)
Frame = +2
Query: 71 DVIVNQPVXIDNGSGVIKAGFAG-------------------DQIPKCRXPNYIGRPXHT 193
D V IDNG+G K GF+G DQ C N+I + +
Sbjct: 2 DAATRPAVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQ-YNA 60
Query: 194 RVMAGALXGXIFXGPRAE---EHRGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTF 364
VMA F G A + GL + +P HG V DW+ ME+ W + L
Sbjct: 61 GVMADL---DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQ-CIFNYLRCN 116
Query: 365 SXXHPVLLTEAPLN 406
H LLT++P++
Sbjct: 117 PEEHYFLLTDSPVS 130
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Frame = +2
Query: 89 PVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL- 265
P+ IDNG+ + G+AG+ P+ N + RP H R + P ++
Sbjct: 21 PIVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRH-RSSGETVTVVGDTDPALMKYFDCTR 79
Query: 266 -SIXYPXXHGXVTDWNDMEKIWNYIXXXDQL-STFSXXHPVLLTEAPLNP 409
+I P V + ME I ++ D+L +T HP+L+TE NP
Sbjct: 80 SAIRSPFDDDVVYQFEYMEYILDF--GFDRLGATSEVGHPILMTECECNP 127
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 39.1 bits (87), Expect = 0.002
Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 19/132 (14%)
Frame = +2
Query: 71 DVIVNQPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGR----PXHTRV-----------MA 205
D V IDNG+G K GFAG+ P P + TR A
Sbjct: 2 DAASRPAVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSA 61
Query: 206 GALXGX-IFXGPRA---EEHRGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXX 373
G + F G A ++ YP +G V +W+ ME+ W + L
Sbjct: 62 GVMADLDFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQ-CIFNYLRCDPED 120
Query: 374 HPVLLTEAPLNP 409
H LLTE+PL P
Sbjct: 121 HYFLLTESPLTP 132
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRP 184
V +DNG G++KAGF GD P PN + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 34.7 bits (76), Expect = 0.049
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +3
Query: 405 TLAGILEKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
+L + E+ A+ F V + S AVL LYA GR +G +D G G
Sbjct: 154 SLQALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHG 201
Score = 31.1 bits (67), Expect = 0.61
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFA-GDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGL 262
+ V +D GS ++KAG A DQ P P+ ++ G + G EE
Sbjct: 2 EAVVVDAGSKLLKAGIALPDQSPSLVMPS--------KMKLEVEDGQMGDGAVVEE---- 49
Query: 263 LSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNP 409
+ P G V DW+ ME + NY+ + +L TE P
Sbjct: 50 --VVQPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTP 96
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 31.5 bits (68), Expect = 0.46
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 254 RGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRK 427
R + + P G DW+ ++ IWN+ S ++ HP+L+ E N + K
Sbjct: 66 RDHMEVISPMKDGTFIDWDIVDNIWNH-----AFSFYAEEHPMLIVEPSTNTGQQREK 118
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 30.7 bits (66), Expect = 0.80
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 254 RGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRK 427
R + + P G DW+ ++ IWN+ S + HP+L+ E N + K
Sbjct: 165 RDHMEVISPMKDGTFIDWDIVDNIWNH-----AFSFYPEEHPMLIVEPSTNTGQQREK 217
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +2
Query: 278 PXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRK 427
P G DW+ ++ IWN+ +L HP+L+ E N + K
Sbjct: 92 PMKDGTFIDWDIVDNIWNH-AFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,221,499
Number of Sequences: 37544
Number of extensions: 141377
Number of successful extensions: 277
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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