Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1038
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 124 5e-29
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 124 5e-29
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 123 7e-29
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 123 7e-29
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 123 9e-29
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 123 9e-29
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 122 2e-28
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 122 2e-28
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 122 2e-28
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 118 3e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 93 8e-20
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 75 2e-14
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 74 5e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 44 9e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 42 2e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 8e-04
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 40 8e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 36 0.013
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 36 0.024
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 5e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VPA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 124 bits (298), Expect = 5e-29
Identities = 55/115 (47%), Positives = 75/115 (65%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVSNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 7e-29
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 123 bits (297), Expect = 7e-29
Identities = 55/115 (47%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 123 bits (296), Expect = 9e-29
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HP+LLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 123 bits (296), Expect = 9e-29
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP HT VM G + G A+ RG+L
Sbjct: 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V +W+DMEKIW++ ++L HP+LLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGIVNNWDDMEKIWHH-TFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 122 bits (293), Expect = 2e-28
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP H VM G + G A+ RG+L
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHH-TFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 122 bits (293), Expect = 2e-28
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP H VM G + G A+ RG+L
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHH-TFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 122 bits (293), Expect = 2e-28
Identities = 54/115 (46%), Positives = 74/115 (64%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
QP+ DNG+G++KAGFAGD P+ P+ +GRP H VM G + G A+ RG+L
Sbjct: 8 QPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGIL 67
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ YP HG V++W+DMEKIW++ ++L HPVLLTEAPLNP N K+
Sbjct: 68 TLKYPIEHGVVSNWDDMEKIWHH-TFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T PA ++++ AVL LYA+GRTTG LDSGDG
Sbjct: 119 EKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDG 160
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 118 bits (283), Expect = 3e-27
Identities = 53/113 (46%), Positives = 72/113 (63%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLLSI 271
+ DNG+G++KAGFAGD P+ P+ +GRP H VM G F G A+ RG+LS+
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARRGILSL 70
Query: 272 XYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
YP HG V++W+DMEKIW++ ++L HP+LLTEAPLNP N K+
Sbjct: 71 KYPIEHGVVSNWDDMEKIWHH-TFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F + P+ ++ + AVL LY++GRTTG LDSGDG
Sbjct: 120 EKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDG 161
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 93.5 bits (222), Expect = 8e-20
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +2
Query: 86 QPVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLL 265
+P+ D G G+++AGFAGD+ PK P +GRP G + G +R +L
Sbjct: 2 KPIVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDIL 56
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
++ P HG V +W+DMEKIW+Y ++L HPVLLTEAP NP N K+
Sbjct: 57 TLKDPMEHGIVNNWDDMEKIWHY-TFYNELRVDPEEHPVLLTEAPYNPKANREKM 110
Score = 45.2 bits (102), Expect = 3e-05
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGD 545
EK + F + VPA ++SM +VL LY++GRTTG LD G+
Sbjct: 108 EKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 75.4 bits (177), Expect = 2e-14
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRP--XHTRVMAGALXGXIFXGPRAEEHRGLL 265
V DNG+G +K GFAG+ P P +GRP + + I G E R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
I YP +G V +W+DME +W++ ++L +LLT+ PLNP +N K+
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDH-AFYNELKINPSDCKILLTDPPLNPSKNREKM 120
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK E F F+ + AVL LYA G TG +DSGDG
Sbjct: 118 EKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDG 159
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 74.1 bits (174), Expect = 5e-14
Identities = 35/77 (45%), Positives = 45/77 (58%)
Frame = +2
Query: 200 MAGALXGXIFXGPRAEEHRGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHP 379
M G +F G AE G+L++ YP HG V++W+DMEKIW Y +L HP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIW-YHTFYSELRVAPEEHP 59
Query: 380 VLLTEAPLNPXRNTRKV 430
VLLTEAPLNP + K+
Sbjct: 60 VLLTEAPLNPKADREKM 76
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK + F T VP+ ++ M A L L+A+GRTTG LDSGDG
Sbjct: 74 EKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDG 115
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 43.6 bits (98), Expect = 9e-05
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGR----------PXHTRVMAGALXGX-----I 226
+ +D GS KAG+AG+ PK P+ +G +T A +
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKL 69
Query: 227 FXGPRAEE-HRGLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPL 403
+ G +A R + I P G VTDW+ ++ +W++ + L HP+LL E PL
Sbjct: 70 YTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDH-AFRNCLMIDPTEHPMLLAEPPL 128
Query: 404 NPXRNTRK 427
N + K
Sbjct: 129 NSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.3 bits (95), Expect = 2e-04
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 18/124 (14%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIG-----------------RPXHTRVMAGALXG 220
+ IDNG+G K GFAG+ P P + + H +A L
Sbjct: 9 IVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADLDF 68
Query: 221 XIFXGPRAEEHRGLL-SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEA 397
I A+ ++ YP HG V DW+ ME+ W + L H LLTE+
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQ-CIFNYLRCDPEDHYFLLTES 127
Query: 398 PLNP 409
PL P
Sbjct: 128 PLTP 131
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 1/115 (0%)
Frame = +2
Query: 89 PVXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRV-MAGALXGXIFXGPRAEEHRGLL 265
P+ IDNG+ + G+AG+ P+ N + RP H + G +
Sbjct: 21 PIVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKATGETVTIVGDLDPSMMKYFDCTRS 80
Query: 266 SIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLNPXRNTRKV 430
P V + ME I +Y + HP+L+TE NP ++ K+
Sbjct: 81 GPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKM 135
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 40.3 bits (90), Expect = 8e-04
Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGX---------------- 223
+ +D GS KAG+AG+ PK P+ IG M +
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESEKE 69
Query: 224 -----IFXGPRAEEHR-GLLSIXYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVL 385
++ G +A +R + + P G V+DW+ ++ IW + L HP+L
Sbjct: 70 KSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEH-AFKSCLMIDPTEHPML 128
Query: 386 LTEAPLNPXRNTRK 427
L E PLN + K
Sbjct: 129 LAEPPLNTQQQREK 142
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +3
Query: 423 EKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
EK AE F VPA F++ VL +ATGR T +D G G
Sbjct: 141 EKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGG 182
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 36.3 bits (80), Expect = 0.013
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 405 TLAGILEKXAEXFFXTXXVPAXFLSMXAVLXLYATGRTTGAELDSGDG 548
T I E+ + F T V + S AVL LYA GR +G +D G G
Sbjct: 99 TPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHG 146
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 35.5 bits (78), Expect = 0.024
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = +2
Query: 92 VXIDNGSGVIKAGFAGDQIPKCRXPNYIGRPXHTRVMAGALXGXIFXGPRAEEHRGLLSI 271
V +DNG G+IKAG G++ P PN + +P ++ + E ++
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKF---IHPSPLTTLSDEIDLTSAAV 61
Query: 272 XYPXXHGXVTDWNDMEKIWNYIXXXDQLSTFSXXHPVLLTEAPLN 406
P G + + + +IW+++ L +LLTEAPL+
Sbjct: 62 RRPIDRGYLINSDLQREIWSHL-FTSLLHIAPSSSSLLLTEAPLS 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,151,912
Number of Sequences: 28952
Number of extensions: 109751
Number of successful extensions: 216
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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