Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1035
(650 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 173 2e-42
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 173 2e-42
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 171 1e-41
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 170 3e-41
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 170 3e-41
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 168 1e-40
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 167 2e-40
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 167 2e-40
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 161 2e-38
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 160 3e-38
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 154 2e-36
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 152 6e-36
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 150 3e-35
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 146 4e-34
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 140 2e-32
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 140 3e-32
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 137 2e-31
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 136 6e-31
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 136 6e-31
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 130 3e-29
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 124 2e-27
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 123 4e-27
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 122 6e-27
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 122 6e-27
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 120 3e-26
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 114 1e-24
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 114 1e-24
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 112 8e-24
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 110 2e-23
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 110 2e-23
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 109 7e-23
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 108 1e-22
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 108 1e-22
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 105 7e-22
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 101 1e-20
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 99 5e-20
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 100 6e-20
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 95 2e-18
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 93 5e-18
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 93 5e-18
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 92 9e-18
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 91 2e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 91 3e-17
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 89 1e-16
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 88 2e-16
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 87 3e-16
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 85 1e-15
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 85 1e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 84 3e-15
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 83 4e-15
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 82 1e-14
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 81 2e-14
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 81 2e-14
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 80 5e-14
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 79 7e-14
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 79 7e-14
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 79 9e-14
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 79 1e-13
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 78 2e-13
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 76 6e-13
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 75 1e-12
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 75 1e-12
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 75 2e-12
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 74 3e-12
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 74 3e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 73 5e-12
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 73 6e-12
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 72 1e-11
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 72 1e-11
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 72 1e-11
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 71 2e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 71 2e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 71 2e-11
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 71 3e-11
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 71 3e-11
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 70 6e-11
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 69 7e-11
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 69 7e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 66 7e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 65 2e-09
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 63 5e-09
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 62 8e-09
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 60 5e-08
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 60 5e-08
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 60 6e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 6e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 58 1e-07
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 58 1e-07
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 58 2e-07
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 58 2e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 56 6e-07
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 55 1e-06
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 55 2e-06
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 55 2e-06
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 54 3e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 54 3e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 53 5e-06
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 52 9e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 52 2e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 51 3e-05
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 50 4e-05
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 50 6e-05
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 49 8e-05
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 41 0.022
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.36
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 37 0.48
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.1
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 36 1.1
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.9
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.9
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.4
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 33 4.5
UniRef50_A1CT89 Cluster: Cell wall glucanase, putative; n=7; Tri... 33 4.5
UniRef50_A1CK37 Cluster: Glycosyl hydrolases family 16, putative... 33 4.5
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 5.9
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 7.8
UniRef50_Q1E8L1 Cluster: Putative uncharacterized protein; n=1; ... 33 7.8
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 173 bits (422), Expect = 2e-42
Identities = 88/140 (62%), Positives = 97/140 (69%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 365 ILPGFGIISHIISQERGKKE 424
ILPGFG+ISH+++ GKKE
Sbjct: 248 ILPGFGMISHVVTYYAGKKE 267
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 173 bits (422), Expect = 2e-42
Identities = 87/140 (62%), Positives = 96/140 (68%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV
Sbjct: 127 TVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 365 ILPGFGIISHIISQERGKKE 424
ILPGFGIISH+++ GKKE
Sbjct: 247 ILPGFGIISHVVAYYAGKKE 266
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV AHH+FTVG+D++TRAYFTSAT+IIA+PTG+K+F LAT+HG +
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGA 331
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 171 bits (416), Expect = 1e-41
Identities = 87/141 (61%), Positives = 96/141 (68%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS + H G SVDL IFSLHLAG SS + D++ LF
Sbjct: 111 TVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSW 170
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYIL
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 365 ILPGFGIISHIISQERGKKET 427
ILPGFGIISH+I E GKKET
Sbjct: 231 ILPGFGIISHMIFNESGKKET 251
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
FIV AHH+FT+G+D++TRAYFTSAT+IIA+PTGIKIF +AT G
Sbjct: 269 FIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSG 313
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 170 bits (413), Expect = 3e-41
Identities = 84/140 (60%), Positives = 96/140 (68%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 365 ILPGFGIISHIISQERGKKE 424
ILPGFG+ISH+++ GKKE
Sbjct: 247 ILPGFGMISHVVTYYAGKKE 266
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV AHH+FTVG+D++TRAYFTSAT+IIA+PTG+K+F LAT+HG +
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGA 331
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 170 bits (413), Expect = 3e-41
Identities = 85/138 (61%), Positives = 96/138 (69%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLFV
Sbjct: 130 TVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVW 189
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 190 SVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 249
Query: 365 ILPGFGIISHIISQERGK 418
ILPGFGIISHI+S GK
Sbjct: 250 ILPGFGIISHIVSTFSGK 267
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/47 (70%), Positives = 42/47 (89%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
F+V AHH+FTVG+D++TRAYFT+AT+IIAVPTGIKIF +AT+ G S
Sbjct: 287 FLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGS 333
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 168 bits (408), Expect = 1e-40
Identities = 85/140 (60%), Positives = 95/140 (67%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 365 ILPGFGIISHIISQERGKKE 424
ILPGFG+ISHI++ GKKE
Sbjct: 247 ILPGFGMISHIVTYYSGKKE 266
Score = 79.0 bits (186), Expect = 9e-14
Identities = 33/47 (70%), Positives = 44/47 (93%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV AHH+FTVG+D++TRAYFTSAT+IIA+PTG+K+F LAT+HG++
Sbjct: 285 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSN 331
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 167 bits (407), Expect = 2e-40
Identities = 85/121 (70%), Positives = 88/121 (72%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLF+
Sbjct: 100 TVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKMSFDQMPLFIW 159
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 160 AVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYIL 219
Query: 365 I 367
I
Sbjct: 220 I 220
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 167 bits (406), Expect = 2e-40
Identities = 83/138 (60%), Positives = 95/138 (68%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHPEVYIL
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYIL 246
Query: 365 ILPGFGIISHIISQERGK 418
I+PGFG++SHI+S GK
Sbjct: 247 IIPGFGMVSHIVSAFSGK 264
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/47 (65%), Positives = 42/47 (89%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
F+V +HH++ VG+D++TRAYFT+AT+IIAVPTGIKIF LAT++G S
Sbjct: 284 FLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGS 330
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 161 bits (390), Expect = 2e-38
Identities = 80/133 (60%), Positives = 93/133 (69%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLFV
Sbjct: 135 TVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVW 194
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHPEVYIL
Sbjct: 195 SILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHPEVYIL 254
Query: 365 ILPGFGIISHIIS 403
ILPGFG+ISHI+S
Sbjct: 255 ILPGFGMISHIVS 267
Score = 71.7 bits (168), Expect = 1e-11
Identities = 32/43 (74%), Positives = 40/43 (93%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
FIV AHH++TVG+D++TRAYFT+AT+IIAVPTGIKIF +ATI
Sbjct: 292 FIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATI 334
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 160 bits (388), Expect = 3e-38
Identities = 81/117 (69%), Positives = 85/117 (72%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV
Sbjct: 124 TVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVW 183
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 355
AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP++
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/50 (44%), Positives = 29/50 (58%)
Frame = +1
Query: 355 LYFNFTRIWYNFSYYFTRKRKKRNLLVV*E*FMLY*QLGY*DSLFELIIY 504
L F+F++ +F F +K +K LLVV FM L Y D LFELI+Y
Sbjct: 240 LMFSFSQDLVSFHMLFPKKVEKSKLLVVSVSFMQSWLLVYSDLLFELIMY 289
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 154 bits (373), Expect = 2e-36
Identities = 78/133 (58%), Positives = 87/133 (65%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHPEVYIL
Sbjct: 188 AIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHPEVYIL 247
Query: 365 ILPGFGIISHIIS 403
I+PGFGI+SHI+S
Sbjct: 248 IIPGFGIVSHIVS 260
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/47 (68%), Positives = 41/47 (87%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
F+V +HH++ VG+D +TRAYFTSAT+IIA+PTGIKIF LATI+G S
Sbjct: 285 FLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGS 331
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 152 bits (369), Expect = 6e-36
Identities = 76/133 (57%), Positives = 89/133 (66%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHPEVYIL
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHPEVYIL 247
Query: 365 ILPGFGIISHIIS 403
I+PGFGIISH++S
Sbjct: 248 IIPGFGIISHVVS 260
Score = 62.5 bits (145), Expect = 8e-09
Identities = 26/37 (70%), Positives = 34/37 (91%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
F+V +HH++ VG+D +TRAYFTSAT+IIA+PTGIKIF
Sbjct: 285 FLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIF 321
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 150 bits (363), Expect = 3e-35
Identities = 75/133 (56%), Positives = 85/133 (63%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSS +H G SVDL IFS HL GI S LPLFV
Sbjct: 131 TVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVW 190
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHPEVYIL
Sbjct: 191 SVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHPEVYIL 250
Query: 365 ILPGFGIISHIIS 403
ILPGFG++SHII+
Sbjct: 251 ILPGFGLVSHIIA 263
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/47 (61%), Positives = 39/47 (82%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV AHH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G S
Sbjct: 288 FIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGS 334
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 146 bits (354), Expect = 4e-34
Identities = 78/138 (56%), Positives = 86/138 (62%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPLS +H G SVDLAIF LHL+GISS +L LF
Sbjct: 128 TLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 365 ILPGFGIISHIISQERGK 418
I+PGFGIIS IS K
Sbjct: 248 IIPGFGIISTTISANSNK 265
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/47 (68%), Positives = 42/47 (89%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
F+V +HH++TVG+D++TRAYFT+AT+IIAVPTGIKIF LAT +G S
Sbjct: 285 FVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGS 331
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 140 bits (340), Expect = 2e-32
Identities = 66/133 (49%), Positives = 87/133 (65%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPP+S+ R+VD AIF++H++G SS + ++PLF
Sbjct: 233 TFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGMTLHKVPLFAW 292
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 365 ILPGFGIISHIIS 403
ILP FG+ISHI++
Sbjct: 353 ILPAFGVISHIVA 365
Score = 57.2 bits (132), Expect = 3e-07
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
F+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+
Sbjct: 390 FVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATM 432
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 140 bits (338), Expect = 3e-32
Identities = 75/138 (54%), Positives = 84/138 (60%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPLS +H VDL IF LHL+GISS +L LF
Sbjct: 154 TLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGW 213
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYIL
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 365 ILPGFGIISHIISQERGK 418
I+PGFGIIS +IS K
Sbjct: 274 IIPGFGIISTVISANSNK 291
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/47 (65%), Positives = 42/47 (89%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV +HH++TVG+D++TRAYFT+AT+IIA+PTG+KIF LAT +G S
Sbjct: 311 FIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGS 357
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 137 bits (331), Expect = 2e-31
Identities = 71/133 (53%), Positives = 86/133 (64%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVY PLS++ G +VD+AI SLH+AG SS + ++PLFV
Sbjct: 171 TVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVW 229
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHPEVYI+
Sbjct: 230 SVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHPEVYIM 289
Query: 365 ILPGFGIISHIIS 403
ILPGFGIIS I+S
Sbjct: 290 ILPGFGIISQIVS 302
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
F+V AHH+FT G+ + + YFT+AT++IAVPTGIKIF +ATI G S
Sbjct: 327 FVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGS 373
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 136 bits (328), Expect = 6e-31
Identities = 65/132 (49%), Positives = 86/132 (65%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 365 ILPGFGIISHII 400
I+P FG++S I+
Sbjct: 265 IVPVFGVVSQIV 276
Score = 65.7 bits (153), Expect = 9e-10
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNSN*XITLIFY 647
F V +HH+FTVG+D ++RAYF+ A++IIA+PTG KIF LATI+G + T + Y
Sbjct: 302 FCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLY 357
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 136 bits (328), Expect = 6e-31
Identities = 65/132 (49%), Positives = 86/132 (65%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHPEVYIL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHPEVYIL 264
Query: 365 ILPGFGIISHII 400
I+P FG++S I+
Sbjct: 265 IVPVFGVVSQIV 276
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 130 bits (314), Expect = 3e-29
Identities = 67/114 (58%), Positives = 75/114 (65%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TV PPLS+NIAH G SVDLAIFSLH+AG+ S + ++PLFV
Sbjct: 46 TVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVW 105
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 346
AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 106 AVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 124 bits (298), Expect = 2e-27
Identities = 69/136 (50%), Positives = 80/136 (58%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPPLS +H G SVDLAIF+LHL+G+SS +L LF A
Sbjct: 162 YPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWAT 221
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+
Sbjct: 222 WSSRSRYFL-------GITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILII 274
Query: 371 PGFGIISHIISQERGK 418
PGFGIIS IS K
Sbjct: 275 PGFGIISTTISSSSNK 290
Score = 70.1 bits (164), Expect = 4e-11
Identities = 30/42 (71%), Positives = 38/42 (90%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
HH++TVG+D++TRAYFT+AT+IIAVPTGIKIF LAT +G S
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGS 390
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 123 bits (296), Expect = 4e-27
Identities = 64/109 (58%), Positives = 69/109 (63%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS N AH G SVDLAIFSLHLAG+SS + + LFV
Sbjct: 110 TVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMKIELVSLFVW 169
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 331
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 122 bits (295), Expect = 6e-27
Identities = 63/139 (45%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV 181
T+YPPLS++ G +DLA+FSLH+AG+SS F L P+ +
Sbjct: 129 TMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLI 188
Query: 182 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 361
+ T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYI
Sbjct: 189 WTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYI 248
Query: 362 LILPGFGIISHIISQERGK 418
LILP FG+ISHI+ + K
Sbjct: 249 LILPAFGVISHILCRSSAK 267
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
F+V HH+F G+DI+TRAYFT+AT++IAVPTG+K+F LATI G
Sbjct: 288 FLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFG 332
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 122 bits (295), Expect = 6e-27
Identities = 64/113 (56%), Positives = 73/113 (64%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV
Sbjct: 128 TVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 343
+V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 188 SVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
Score = 68.5 bits (160), Expect = 1e-10
Identities = 31/46 (67%), Positives = 40/46 (86%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGN 617
FIV A H++ VG+D++TRAYFT+AT+IIAVPTGIKIF LAT+ G+
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGS 295
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 120 bits (289), Expect = 3e-26
Identities = 62/109 (56%), Positives = 70/109 (64%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 331
A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 187 AIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 114 bits (275), Expect = 1e-24
Identities = 64/131 (48%), Positives = 76/131 (58%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPLS G VD +FSLHLAG+SS S + V
Sbjct: 223 TLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS-----IIVW 276
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
A T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+L
Sbjct: 277 AYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVL 336
Query: 365 ILPGFGIISHI 397
ILPGFGI+SHI
Sbjct: 337 ILPGFGIVSHI 347
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
+V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVF 411
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 114 bits (275), Expect = 1e-24
Identities = 61/122 (50%), Positives = 73/122 (59%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLFV
Sbjct: 128 TVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG I+
Sbjct: 188 SIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQTVATII 247
Query: 365 IL 370
+L
Sbjct: 248 ML 249
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 112 bits (269), Expect = 8e-24
Identities = 58/132 (43%), Positives = 74/132 (56%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YP L H + D +F++HL GISS SF LF+
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI+
Sbjct: 190 AALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYII 249
Query: 365 ILPGFGIISHII 400
+LP FG+IS I+
Sbjct: 250 LLPVFGLISTIV 261
Score = 47.2 bits (107), Expect = 3e-04
Identities = 17/33 (51%), Positives = 27/33 (81%)
Frame = +3
Query: 492 AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
AHH+F VG+D+++RAYF +I+I +PT +K+F
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLF 323
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 110 bits (265), Expect = 2e-23
Identities = 61/155 (39%), Positives = 91/155 (58%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG +++ +
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG--QIWPI 262
Query: 365 ILPGFGIISHIISQERGKKETCWLFRNNLCYTSNW 469
I+ II++ I + KK ++ N+ CY + +
Sbjct: 263 IIIIIIIINYAICGKDFKK----IYTNSPCYIAGY 293
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 110 bits (265), Expect = 2e-23
Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPLS+++++ G +D IF L AGI+S D++
Sbjct: 135 TLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAW 192
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 365 ILPGFGIISHIISQERGKKETCWLFRNN---LCYTSNWVIRIHCLSSSYIHCRY 517
ILPGFGIIS ++S K+ +F N L N +R+ L +SY+H R+
Sbjct: 253 ILPGFGIISLLLSTYTTKE----MFGNQTMILAMGFNSFVRLFGLGTSYVHIRF 302
Score = 33.5 bits (73), Expect = 4.5
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 537 YFTSATIIIAVPTGIKIFR*LATI 608
YFT+ TI+IA+PTG KIF + T+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 109 bits (261), Expect = 7e-23
Identities = 57/113 (50%), Positives = 68/113 (60%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLFV
Sbjct: 128 TVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVW 187
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 343
A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 188 AILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 108 bits (260), Expect = 1e-22
Identities = 57/132 (43%), Positives = 71/132 (53%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPPLS S+D I LH GI S + DQ+ +FV
Sbjct: 138 TFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVW 196
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++
Sbjct: 197 TSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVI 256
Query: 365 ILPGFGIISHII 400
ILP FGIIS +
Sbjct: 257 ILPVFGIISEAV 268
Score = 57.6 bits (133), Expect = 2e-07
Identities = 22/42 (52%), Positives = 34/42 (80%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
HH++T G+DI+TR YF++AT+IIA+P+ +KIF L T G++
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSN 341
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 108 bits (259), Expect = 1e-22
Identities = 61/109 (55%), Positives = 70/109 (64%)
Frame = -3
Query: 330 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 151
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 150 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TV 4
+R I+E PAKC+EKI STD P CAI SGG TV
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTV 108
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 105 bits (253), Expect = 7e-22
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 181
T+YPPLS+++ +VD+ IF L ++G++S + L +
Sbjct: 132 TLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVST 191
Query: 182 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 361
++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYI
Sbjct: 192 WSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYI 251
Query: 362 LILPGFGIISHIIS 403
LILP FG+ISH+IS
Sbjct: 252 LILPAFGVISHVIS 265
Score = 56.8 bits (131), Expect = 4e-07
Identities = 21/41 (51%), Positives = 33/41 (80%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LAT 605
+V HH++T G++++TRAYFTS TI+I++PTG K+F + T
Sbjct: 291 LVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICT 331
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 101 bits (242), Expect = 1e-20
Identities = 54/122 (44%), Positives = 69/122 (56%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 133 TVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLFAW 192
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++ HPEV I+
Sbjct: 193 AVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWNHPEVKII 252
Query: 365 IL 370
L
Sbjct: 253 CL 254
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 99 bits (238), Expect = 5e-20
Identities = 56/127 (44%), Positives = 75/127 (59%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLFV
Sbjct: 145 TLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVW 204
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P V IL
Sbjct: 205 SVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP-VLIL 261
Query: 365 ILPGFGI 385
I GI
Sbjct: 262 IWLTSGI 268
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 99.5 bits (237), Expect = 6e-20
Identities = 56/132 (42%), Positives = 74/132 (56%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPPLSS SV+ ++FSLHLAGI+S + L LF
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCW 170
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++
Sbjct: 171 SIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVV 230
Query: 365 ILPGFGIISHII 400
ILP FG+ S I
Sbjct: 231 ILPVFGLFSSSI 242
Score = 63.7 bits (148), Expect = 4e-09
Identities = 27/42 (64%), Positives = 38/42 (90%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
+V AHH++T G+DI+TR+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 94.7 bits (225), Expect = 2e-18
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 181
T+YPPLS+ A G ++DL++ +H+ GISS +F + ++
Sbjct: 138 TLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYN 197
Query: 182 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 361
++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY+
Sbjct: 198 FSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYV 255
Query: 362 LILPGFGIISHIIS 403
+ILP FG+ S I++
Sbjct: 256 IILPVFGLTSLILT 269
Score = 54.0 bits (124), Expect = 3e-06
Identities = 21/37 (56%), Positives = 32/37 (86%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
+ V AHH+FTVG+DI++R+YF+ AT II++PT +K+F
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/96 (54%), Positives = 56/96 (58%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q PLFV
Sbjct: 116 TVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVW 175
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 292
AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 176 AVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 93.1 bits (221), Expect = 5e-18
Identities = 40/53 (75%), Positives = 46/53 (86%)
Frame = +2
Query: 266 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKE 424
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/56 (58%), Positives = 47/56 (83%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNSN*XITLIFY 647
F+V AHH+FTVG+D++TRAYFT+AT+IIAVPTGIK+F +AT+ G++ T +F+
Sbjct: 262 FLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFW 317
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 92.3 bits (219), Expect = 9e-18
Identities = 52/130 (40%), Positives = 66/130 (50%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
Y PLSS + VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILIL
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILIL 267
Query: 371 PGFGIISHII 400
PGFG+IS +I
Sbjct: 268 PGFGMISEVI 277
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +3
Query: 492 AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWG 347
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 91.5 bits (217), Expect = 2e-17
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T Y PLS+N+ G L + ++ + G+SS ++ +LPL +
Sbjct: 160 TTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRLPLTIW 219
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHP 349
+ +TA A +LL DR+ T FF GGGDPIL+QHLF FGHP
Sbjct: 220 GLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHP 279
Query: 350 EVYILILPGFGIISHIIS 403
EVYI+ILP +GI+ ++S
Sbjct: 280 EVYIMILPAWGILGDVLS 297
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 90.6 bits (215), Expect = 3e-17
Identities = 53/132 (40%), Positives = 66/132 (50%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPPLS G +L I SL L G SS +PLF
Sbjct: 140 TSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCW 197
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+
Sbjct: 198 AMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIM 257
Query: 365 ILPGFGIISHII 400
ILP FG+IS +I
Sbjct: 258 ILPFFGVISEVI 269
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
IV AHH+FT G R +F + T++IAVPTGIKIF T+ G
Sbjct: 296 IVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWG 339
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 88.6 bits (210), Expect = 1e-16
Identities = 50/139 (35%), Positives = 72/139 (51%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+Y PLS ++ +VD+ + LHL G+S+ + L +F
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSW 241
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+ + A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L
Sbjct: 242 TMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVL 300
Query: 365 ILPGFGIISHIISQERGKK 421
+LP GI+S I+ + G+K
Sbjct: 301 VLPPMGIVSLILPKFSGRK 319
Score = 42.3 bits (95), Expect = 0.010
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+
Sbjct: 338 FGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTM 380
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 87.8 bits (208), Expect = 2e-16
Identities = 56/144 (38%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Frame = +2
Query: 5 TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 169
T+Y PLS N A+ G VDL + LHL+G+S+ S+ L
Sbjct: 211 TMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANL 268
Query: 170 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 349
+F + + AI +LL DRN TSFF AG G IL+QHLF FFGHP
Sbjct: 269 DIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHP 326
Query: 350 EVYILILPGFGIISHIISQERGKK 421
EVYI++LP GIIS+I+ + G++
Sbjct: 327 EVYIIVLPPMGIISYILPRFSGRR 350
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI-HGNSN*XITLIF 644
F V AHH+F G+D RA F + ++ IAVP+ +K F + T+ +GN ++F
Sbjct: 369 FGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLF 424
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 87.4 bits (207), Expect = 3e-16
Identities = 47/131 (35%), Positives = 68/131 (51%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
Y PLS G+ D+ + +S+ S D++PLFV ++
Sbjct: 145 YVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSM 204
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ L
Sbjct: 205 LVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFL 264
Query: 371 PGFGIISHIIS 403
P G++S I++
Sbjct: 265 PAVGMVSSIVA 275
Score = 39.5 bits (88), Expect = 0.068
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH+F G+ ++FT++++ IAVP G++IF LATI
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/132 (36%), Positives = 66/132 (50%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+ AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQ 202
Query: 365 ILPGFGIISHII 400
+LP FG S II
Sbjct: 203 VLPVFGFYSEII 214
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIH 611
F + HH+F G+ TR F+ T++IAVPTGIKIF + T++
Sbjct: 240 FFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLY 283
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 85.0 bits (201), Expect = 1e-15
Identities = 40/57 (70%), Positives = 41/57 (71%)
Frame = +1
Query: 265 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNLLV 435
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK NL V
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWV 63
Score = 54.4 bits (125), Expect = 2e-06
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = +2
Query: 410 RGKKETCWLFRNNLCYTSNWVIRIHCLSSSYIHCRYRY 523
+ KK W+F +NLCY SNW+I I+CLSSSYI+ Y
Sbjct: 55 KSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSY 92
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +3
Query: 537 YFTSATIIIAVPTGIKIFR*LATIHG 614
YFTSAT+IIAVPTGIKIF LAT HG
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHG 122
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 83.8 bits (198), Expect = 3e-15
Identities = 49/130 (37%), Positives = 63/130 (48%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
Y PL+ VD I + L G++S + +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ AF A LL DR+ T FF P GGD +L+QHLF FFGHPEVYILIL
Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILIL 266
Query: 371 PGFGIISHII 400
P GIIS ++
Sbjct: 267 PTMGIISEVL 276
Score = 52.0 bits (119), Expect = 1e-05
Identities = 25/56 (44%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI-HGNSN*XITLIF 644
F+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ G+ N ++++
Sbjct: 302 FLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLY 357
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 83.4 bits (197), Expect = 4e-15
Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 2/131 (1%)
Frame = +2
Query: 11 YPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
YPP+S + + H L I ++ L+GISS F ++P+FV
Sbjct: 153 YPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVW 212
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L
Sbjct: 213 TAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVL 272
Query: 365 ILPGFGIISHI 397
+LP FGI S +
Sbjct: 273 VLPVFGIFSEL 283
Score = 40.7 bits (91), Expect = 0.030
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
IV AHH+F G R F T++IA+PTG+K+F L T+
Sbjct: 311 IVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTL 352
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 82.2 bits (194), Expect = 1e-14
Identities = 48/139 (34%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+YPPLS+ + VDL + + +AG SS + LF
Sbjct: 134 TLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMSLFAW 191
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHP 349
+V + A +LL +R+L FF DPA GDP L+QH+F FFGHP
Sbjct: 192 SVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHP 251
Query: 350 EVYILILPGFGIISHIISQ 406
EVYIL+LP G++S +I +
Sbjct: 252 EVYILVLPAMGLVSEVIQR 270
Score = 43.2 bits (97), Expect = 0.006
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
F V HH+FT D R AT+ +A+P+G+K+F +AT++G
Sbjct: 294 FAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYG 338
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 81.4 bits (192), Expect = 2e-14
Identities = 49/142 (34%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Frame = +2
Query: 5 TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--LPL 175
T P SSNI + G S D+ I S+ AGIS+ + +P
Sbjct: 285 TFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLMPF 344
Query: 176 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 355
++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEV
Sbjct: 345 VTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEV 404
Query: 356 YILILPGFGIISHIISQERGKK 421
Y+LI+P FG I+ I+ ++
Sbjct: 405 YVLIIPTFGFINMIVPHNNTRR 426
Score = 36.7 bits (81), Expect = 0.48
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKI 587
++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKV 480
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 81.0 bits (191), Expect = 2e-14
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T Y P S AH +V +F + G SS ++ ++PLFV
Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYI 361
A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI
Sbjct: 213 AIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYI 271
Query: 362 LILPGFGIISHIIS 403
++LP FG++S +++
Sbjct: 272 MVLPSFGVMSEVVA 285
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 79.8 bits (188), Expect = 5e-14
Identities = 34/47 (72%), Positives = 43/47 (91%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
FIV AHH+FTVG+D++TRAYFTSAT+IIA+PTG+K+F LAT+HG S
Sbjct: 50 FIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGS 96
Score = 57.2 bits (132), Expect = 3e-07
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +2
Query: 335 FFGHPEVYILILPGFGIISHIISQERGKKE 424
FFGHPEVYILILPGFG+ISHI++ GKKE
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 79.4 bits (187), Expect = 7e-14
Identities = 37/126 (29%), Positives = 63/126 (50%)
Frame = +2
Query: 23 SSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITA 202
S ++ +G +D + L ++G+ + ++ +LPLF + +
Sbjct: 142 SLSLHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVAS 201
Query: 203 FXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFG 382
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FG
Sbjct: 202 ALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFG 261
Query: 383 IISHII 400
I S +I
Sbjct: 262 IFSEVI 267
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNSN*XITLIFY 647
F+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + T + Y
Sbjct: 293 FMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLY 348
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 79.4 bits (187), Expect = 7e-14
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+Y PL++ I G +DLA ++ L +S + ++P+F
Sbjct: 136 TLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFTW 195
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYI 361
++ T +LL DRNL T FF +PAGG +L+ HLF FFGHPEVYI
Sbjct: 196 SILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYI 253
Query: 362 LILPGFGIISHIISQERGK 418
L+ P G ++ +IS GK
Sbjct: 254 LLFPALGAMADVISTFSGK 272
Score = 36.7 bits (81), Expect = 0.48
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIH 611
F+V HH+F G +I TR +++ TI+I++P + + + T++
Sbjct: 292 FVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLY 335
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 79.0 bits (186), Expect = 9e-14
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = +2
Query: 14 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 193
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 194 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 373
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 374 GFGIISHII 400
G++ ++
Sbjct: 252 AIGMMYEMV 260
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 78.6 bits (185), Expect = 1e-13
Identities = 46/132 (34%), Positives = 62/132 (46%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T+Y PLS I G D+ I + GI S + ++P+F
Sbjct: 153 TMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTW 212
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+ + + A +L DR L +DPA GG +L+QHLF FFGHPEVY+L
Sbjct: 213 NIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVL 271
Query: 365 ILPGFGIISHII 400
LP FGI+S II
Sbjct: 272 ALPFFGIVSEII 283
Score = 33.5 bits (73), Expect = 4.5
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 492 AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
AHH+F G + +F+ T +I+VPTG+K F + T+
Sbjct: 313 AHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTM 349
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 77.8 bits (183), Expect = 2e-13
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
F+V AHH+FTVG+D++TRAYFTSAT+IIAVPTGIK+F LAT HG
Sbjct: 198 FVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHG 242
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 350 EVYILILPGFGIISHIISQERGKKE 424
EVYILILPGFG+ISHIISQE GKKE
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 76.2 bits (179), Expect = 6e-13
Identities = 43/127 (33%), Positives = 60/127 (47%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 371 PGFGIIS 391
P GI+S
Sbjct: 285 PAMGIVS 291
Score = 37.5 bits (83), Expect = 0.28
Identities = 16/43 (37%), Positives = 28/43 (65%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
F V HH+F GI A+F +A+++I++P+ + +F +ATI
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATI 362
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 75.4 bits (177), Expect = 1e-12
Identities = 45/130 (34%), Positives = 61/130 (46%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ +F A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 371 PGFGIISHII 400
P G++S II
Sbjct: 271 PALGMVSSII 280
Score = 40.7 bits (91), Expect = 0.030
Identities = 16/41 (39%), Positives = 30/41 (73%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGN 617
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G+
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGS 351
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/137 (32%), Positives = 65/137 (47%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
+Y PLS++ G S D + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 367
+ TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
Query: 368 LPGFGIISHIISQERGK 418
LP G+++ ++ GK
Sbjct: 290 LPAAGMVATMLPTFVGK 306
Score = 42.7 bits (96), Expect = 0.007
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +3
Query: 492 AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 74.5 bits (175), Expect = 2e-12
Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Frame = +2
Query: 8 VYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 178
+YPPLS+ ++ G + + + S+ L IS SF +LPL
Sbjct: 177 IYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLT 236
Query: 179 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHL 328
+ A ITA A +L+ DR+L TSFF AG GG P+L+QHL
Sbjct: 237 IWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHL 296
Query: 329 F*FFGHPEVYILILPGFGIISHIISQERGK 418
F F GHPEVYI+++P GI S +I+ K
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVIATNARK 326
Score = 39.1 bits (87), Expect = 0.090
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI-HGN 617
FIV AHH+F G++ + F T+IIAVP+ +K F + T+ GN
Sbjct: 346 FIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGN 392
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 74.1 bits (174), Expect = 3e-12
Identities = 42/131 (32%), Positives = 61/131 (46%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
+YPPL+ G + D + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 367
+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
Query: 368 LPGFGIISHII 400
LP G++S I+
Sbjct: 274 LPAAGLVSMIV 284
Score = 42.3 bits (95), Expect = 0.010
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH+FT GI + +F++A++ +A+P+GI++F +ATI
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATI 352
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 73.7 bits (173), Expect = 3e-12
Identities = 42/131 (32%), Positives = 59/131 (45%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
+YPPLSS + G + D + + IS+ S ++P+F
Sbjct: 144 MYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWY 203
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 367
+TA +L +R + FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 204 ALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIF 263
Query: 368 LPGFGIISHII 400
LP G IS I+
Sbjct: 264 LPAAGAISTIL 274
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 73.3 bits (172), Expect = 5e-12
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +2
Query: 8 VYPPLS-SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 127 MYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKVP--YLKMPLFVW 184
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
TA + +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 185 GFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
Query: 365 ILPGFGIISHII 400
ILP G++S ++
Sbjct: 245 ILPAMGLVSELL 256
Score = 33.1 bits (72), Expect = 5.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
HH+FT + + ++ T+ IA+P+G+K+ AT++G
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYG 327
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 72.9 bits (171), Expect = 6e-12
Identities = 44/133 (33%), Positives = 60/133 (45%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T Y PL+SN G + + L +AGI + + ++P+F
Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTW 226
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
IT A+ +L DR FF GG P+L+ +LF +GHPEVYI+
Sbjct: 227 TTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIV 286
Query: 365 ILPGFGIISHIIS 403
ILP FGI S IIS
Sbjct: 287 ILPAFGIFSEIIS 299
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/44 (40%), Positives = 29/44 (65%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIH 611
F+V HH FT+G ++F+ T+ I++PTG+KIF L T++
Sbjct: 324 FLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMY 367
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 72.1 bits (169), Expect = 1e-11
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Frame = +2
Query: 5 TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 175
T YPPLS ++ G + L + + G+SS + +LPL
Sbjct: 162 TSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPL 221
Query: 176 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQ 322
+ A+ ITA A ++L DR + T FF P AGGG P+L+Q
Sbjct: 222 TIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQ 281
Query: 323 HLF*FFGHPEVYILILPGFGIISHIIS 403
HLF F+ HP VYI+ILP G++S I++
Sbjct: 282 HLFWFYSHPAVYIMILPAMGMVSDILA 308
Score = 39.5 bits (88), Expect = 0.068
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
FIV HH+F G++ F AT++IA+P+ +K F L T++G
Sbjct: 333 FIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYG 377
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 72.1 bits (169), Expect = 1e-11
Identities = 42/137 (30%), Positives = 61/137 (44%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPPL+ G VD I++L L+G+ + +P+F
Sbjct: 173 YPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTC 232
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILIL
Sbjct: 233 TWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILIL 292
Query: 371 PGFGIISHIISQERGKK 421
P FG+ S + S GK+
Sbjct: 293 PAFGVFSEVTSTFAGKR 309
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIH 611
F V HH FT+G +F AT++I++PTG+K+F L TI+
Sbjct: 328 FAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIY 371
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 71.7 bits (168), Expect = 1e-11
Identities = 42/137 (30%), Positives = 62/137 (45%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPPL+ VD I++L ++GI + +P+F
Sbjct: 174 YPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFTWTC 233
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+L
Sbjct: 234 TWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVL 293
Query: 371 PGFGIISHIISQERGKK 421
P FGI S ++S GK+
Sbjct: 294 PAFGIFSEVVSTFAGKR 310
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIH 611
F+V HH FT+G A+F AT+II++PTG+K+F L TI+
Sbjct: 329 FMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIY 372
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/131 (31%), Positives = 59/131 (45%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
+YPPL+S + G + D + + IS+ S D++P++
Sbjct: 144 MYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWY 203
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 367
+TA +L +R FF A GGD +L+QHLF FGHPEVYI+
Sbjct: 204 ALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIF 263
Query: 368 LPGFGIISHII 400
LP G IS I+
Sbjct: 264 LPAAGAISTIL 274
Score = 37.9 bits (84), Expect = 0.21
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +2
Query: 17 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 196
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 197 TAFXXXXXXXXXAGAITILLTDR 265
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/67 (55%), Positives = 43/67 (64%), Gaps = 10/67 (14%)
Frame = +2
Query: 248 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHI 397
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S +
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 398 ISQERGK 418
IS K
Sbjct: 298 ISTHARK 304
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI-HGNSN*XITLIF 644
F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ HG+ + + ++F
Sbjct: 324 FVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLF 379
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/79 (43%), Positives = 46/79 (58%)
Frame = +2
Query: 164 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 343
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 344 HPEVYILILPGFGIISHII 400
HPEVYILILP GIIS +I
Sbjct: 260 HPEVYILILPAMGIISEVI 278
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
F V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G
Sbjct: 304 FTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWG 348
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 70.5 bits (165), Expect = 3e-11
Identities = 45/136 (33%), Positives = 58/136 (42%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
TA L DR L+ FF GG+ + + ++F FGHPEVYILIL
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILIL 312
Query: 371 PGFGIISHIISQERGK 418
P FG+ S I S GK
Sbjct: 313 PAFGVYSEIFSTFSGK 328
Score = 38.7 bits (86), Expect = 0.12
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
F+V HH FT+G A F A+++I +PTG+KI+
Sbjct: 348 FLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIY 384
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/133 (29%), Positives = 63/133 (47%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T Y P S A VD + ++ L G SS S ++P++V
Sbjct: 140 TFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVW 196
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
+V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY++
Sbjct: 197 SVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVM 256
Query: 365 ILPGFGIISHIIS 403
+LP GI++ + S
Sbjct: 257 LLPYLGILAEVAS 269
Score = 42.3 bits (95), Expect = 0.010
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
+V AHH+FTVG + F T +IAVPTG+K+F + T+ G
Sbjct: 295 MVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWG 338
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 69.3 bits (162), Expect = 7e-11
Identities = 39/129 (30%), Positives = 60/129 (46%)
Frame = +2
Query: 14 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 193
PPL++ G + D + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 194 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 373
+ A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
Query: 374 GFGIISHII 400
G++S I+
Sbjct: 335 AAGMVSMIV 343
Score = 37.9 bits (84), Expect = 0.21
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LAT 605
HH+FT GI + ++F +A+ +A+P+G+++F +AT
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIAT 410
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 69.3 bits (162), Expect = 7e-11
Identities = 39/132 (29%), Positives = 59/132 (44%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T Y P S+ + V L F L G SS + +LPLFV
Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVW 205
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
++ T+ ++ ++ + FDPA GGDP+L+QH F F+ HP VYI+
Sbjct: 206 SIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIM 265
Query: 365 ILPGFGIISHII 400
+LP +IS ++
Sbjct: 266 VLPAMAVISEVV 277
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.1 bits (154), Expect = 7e-10
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 185 AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 361
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+
Sbjct: 187 AT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
Query: 362 LILPGFGIISHIIS 403
+ LP ++ I++
Sbjct: 246 IFLPFMAMVFEIVA 259
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 64.9 bits (151), Expect = 2e-09
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 11/93 (11%)
Frame = +2
Query: 155 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 301
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 302 GDPILYQHLF*FFGHPEVYILILPGFGIISHII 400
G +L+QHLF FFGHPEVYI ILP GI+SHI+
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHIL 306
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 63.3 bits (147), Expect = 5e-09
Identities = 40/131 (30%), Positives = 58/131 (44%)
Frame = +2
Query: 11 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 190
YPPLS VD +S+ ++GI + F+++ +F+
Sbjct: 168 YPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTC 227
Query: 191 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 370
+ + + DR L+T F+ GG +LY +L +GHPEVYILIL
Sbjct: 228 LCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILIL 287
Query: 371 PGFGIISHIIS 403
P FGI S IIS
Sbjct: 288 PSFGIFSEIIS 298
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI
Sbjct: 323 FLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/131 (27%), Positives = 56/131 (42%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
+YPPL++ G D+ + L ++S + +PL+
Sbjct: 172 MYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPLYAWY 229
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 367
V + + +R + FFDP GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 VLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIF 289
Query: 368 LPGFGIISHII 400
LP + + I+
Sbjct: 290 LPLIALAAMIV 300
Score = 38.7 bits (86), Expect = 0.12
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH+FT G+ + +F++A+ + +PTGI++F +AT+
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATL 368
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +2
Query: 239 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 400
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS II
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
Score = 40.3 bits (90), Expect = 0.039
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
HH FT+G +F++AT+++ +PTG+K+F T+
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTL 389
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 60.1 bits (139), Expect = 5e-08
Identities = 42/110 (38%), Positives = 48/110 (43%)
Frame = +2
Query: 8 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 187
VYPP SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 118 VYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWX 177
Query: 188 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 337
A AIT+L R N SFF P G P + F F
Sbjct: 178 XVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 59.7 bits (138), Expect = 6e-08
Identities = 23/37 (62%), Positives = 33/37 (89%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
+ V AHH+FTVG+D++TR YF+SAT++IA+PT IK+F
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVF 78
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 59.7 bits (138), Expect = 6e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +1
Query: 178 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 345
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFS 73
TVYPPLSS AH G SVDLAI+S
Sbjct: 43 TVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +2
Query: 161 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 340
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 341 GHPEVYILIL 370
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 58.4 bits (135), Expect = 1e-07
Identities = 34/78 (43%), Positives = 40/78 (51%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLFV
Sbjct: 127 TVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVW 186
Query: 185 AVGITAFXXXXXXXXXAG 238
A+ +TA AG
Sbjct: 187 AIFVTAILLLLSLPVLAG 204
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +3
Query: 519 DIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
D++TRAYFTSAT+IIAVPTGIKIF LAT+HG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHG 32
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 58.0 bits (134), Expect = 2e-07
Identities = 41/133 (30%), Positives = 59/133 (44%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 184
TVY PLSS D A ++ L GI + LPLFV
Sbjct: 157 TVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPLFVW 216
Query: 185 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 364
AV A G +LL ++ S++ GG +++++LF +FGHPEVY+L
Sbjct: 217 AVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLL 275
Query: 365 ILPGFGIISHIIS 403
+LPG G + +S
Sbjct: 276 LLPGTGAMFDYLS 288
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 56.4 bits (130), Expect = 6e-07
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +2
Query: 155 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 301
+F +LP+ + + ITA + + DR T FF P+G G
Sbjct: 218 TFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGG 277
Query: 302 GDPILYQHLF*FFGHPEVYILILPGFGIISHIIS 403
G P+L+QHLF F+ HP VYI++LP G++S ++S
Sbjct: 278 GQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 39.9 bits (89), Expect = 0.052
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
FIV HH+FT G++ F +T++IA+P+ IK F ATI G
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWG 380
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/44 (54%), Positives = 33/44 (75%)
Frame = +3
Query: 492 AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNSN 623
AHH+ TVG++ +TRAYF++ TI+IA+PTG KIF L T + N
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHN 45
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +2
Query: 164 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 343
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 344 HPEVYILILPGFGIISHIIS 403
HP VY+++LP GI + + S
Sbjct: 258 HPAVYVMLLPYLGIGAEVAS 277
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWG 346
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/33 (75%), Positives = 29/33 (87%)
Frame = +3
Query: 516 IDIETRAYFTSATIIIAVPTGIKIFR*LATIHG 614
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HG
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHG 33
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/46 (47%), Positives = 32/46 (69%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
+V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G S
Sbjct: 50 VVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGGGS 95
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = +2
Query: 335 FFGHPEVYILILPGFGIISHI 397
FFGHPEVY+LILP FGI+SHI
Sbjct: 1 FFGHPEVYVLILPVFGIVSHI 21
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 522 IETRAYFTSATIIIAVPTGIKIFR*LATIHGNSN 623
++TRAYFTSAT+IIAVPTGIKIF LAT NSN
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLATFTWNSN 35
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/30 (73%), Positives = 29/30 (96%)
Frame = +3
Query: 501 IFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
++ VG+D++TRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 52.4 bits (120), Expect = 9e-06
Identities = 20/32 (62%), Positives = 27/32 (84%)
Frame = +3
Query: 495 HHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
HH+FTVG+D+ T +F+S T+II VPTGIK+F
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVF 84
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Frame = +2
Query: 167 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 313
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 314 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKK 421
L+ HLF FFGHPEVYI+ P G+++ G++
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 480 FIV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LATI 608
F+V HH+F GI++ + F + TI I++P + +F + T+
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTM 348
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +3
Query: 483 IV*AHHIFTVGIDIETRAYFTSATIIIAVPTGIKIF 590
+V HH+F VG D++T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2
Query: 5 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 97
TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 22 TVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 49.6 bits (113), Expect = 6e-05
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 322 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNL 429
+ ++IFW+S SLYFN IWYNF YY+T K K L
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCL 37
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 49.2 bits (112), Expect = 8e-05
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +3
Query: 510 VGIDIETRAYFTSATIIIAVPTGIKIFR*LATIHGNS 620
VG+ + RAYFTSAT+IIA+PTGIK F LAT G +
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGT 332
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/35 (51%), Positives = 29/35 (82%)
Frame = +3
Query: 501 IFTVGIDIETRAYFTSATIIIAVPTGIKIFR*LAT 605
++T G++++TRA+FTS TI+I++PTG K+F L T
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCT 35
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +1
Query: 181 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 333
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 41.1 bits (92), Expect = 0.022
Identities = 22/43 (51%), Positives = 28/43 (65%)
Frame = -2
Query: 613 PCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 485
P + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 52 PASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 37.1 bits (82), Expect = 0.36
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +2
Query: 44 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 223
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 224 XXXAGAITILLTDRNLNT 277
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.7 bits (81), Expect = 0.48
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 278 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHII 400
S F G P+ Y F F HPEVY+ ILP F I I+
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL 351
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 299 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 415
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 35.5 bits (78), Expect = 1.1
Identities = 26/80 (32%), Positives = 37/80 (46%)
Frame = +1
Query: 193 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 372
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 373 RIWYNFSYYFTRKRKKRNLL 432
I ++ +K N+L
Sbjct: 154 SIRNRITHLHNIFSQKSNIL 173
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 347 PEVYILILPGFGIISHIISQERGKK 421
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 305 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 418
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 311 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 418
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 425 TCWLFRNNLCYTSNWVIRIHCLSSSYIHCRYRY*DTSIFY 544
T W+ N L + SNW I C+S ++H R TSI Y
Sbjct: 35 TFWVPGNGLRHDSNWSPSIPCMSPPHVHSRNGRSHTSILY 74
>UniRef50_A1CT89 Cluster: Cell wall glucanase, putative; n=7;
Trichocomaceae|Rep: Cell wall glucanase, putative -
Aspergillus clavatus
Length = 452
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 272 NTSFFDPAGGGD-PILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETC--WLFR 442
N + F A GD P++ + + FGH + I PG GI+S + Q E WL
Sbjct: 67 NGAAFTVAKQGDSPLIQSNWYMMFGHVDFVIKTAPGTGIVSSAVLQSDDLDEIDWEWLGG 126
Query: 443 NNLCYTSNW 469
NN +N+
Sbjct: 127 NNAYVQTNY 135
>UniRef50_A1CK37 Cluster: Glycosyl hydrolases family 16, putative;
n=7; Eurotiomycetidae|Rep: Glycosyl hydrolases family
16, putative - Aspergillus clavatus
Length = 363
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 275 TSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETCW 433
T F A P + + F FFG E +I + G GIIS ++ Q + E W
Sbjct: 70 TEFTIKAEHESPTMQSNFFIFFGIVESHIKVAKGKGIISSVVLQSDDRDEIDW 122
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 44 GRSVDLAIFSLHLAGISS 97
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 264 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 142
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 7.8
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 318 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 181
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q1E8L1 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 416
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 299 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETCW 433
G P + + + FGH EV + PG GI+S ++ Q E W
Sbjct: 75 GDYPTIQSNFYIMFGHFEVEVKAAPGRGIVSSVVMQSDCLDEIDW 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 472,504,085
Number of Sequences: 1657284
Number of extensions: 8260371
Number of successful extensions: 19109
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 17517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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