Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1034
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 250 7e-67
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 72 5e-13
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 49 4e-06
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.81
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 31 0.81
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 1.1
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_35688| Best HMM Match : COX2_TM (HMM E-Value=8.8) 29 4.3
SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3) 29 4.3
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 4.3
SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05) 28 5.7
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 28 5.7
SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022) 28 5.7
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 28 5.7
SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3) 28 5.7
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 28 5.7
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_361| Best HMM Match : DUF1122 (HMM E-Value=0.5) 28 5.7
SB_26818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09) 28 7.6
SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 28 7.6
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 28 7.6
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 250 bits (612), Expect = 7e-67
Identities = 120/143 (83%), Positives = 131/143 (91%)
Frame = +2
Query: 185 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEA 364
E +DLY YKKL++ LEFLEVQEEYIKDEQ+NLKKE LHAQEEVKRIQSVPLVIGQF EA
Sbjct: 35 EMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEA 94
Query: 365 VDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQ 544
VDQNTGIV STTGSNYYVR LSTID+ELLKPSASVALHKHSNALVD+LPPEADSSI+ML
Sbjct: 95 VDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLT 154
Query: 545 ADEKPDVQYSDIGGMDTQKQEIR 613
+EKP+V Y++IGGMD QKQEIR
Sbjct: 155 NEEKPNVSYAEIGGMDIQKQEIR 177
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 109 bits (263), Expect = 1e-24
Identities = 53/144 (36%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
Frame = +2
Query: 206 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFXEAVDQNT 379
K KL R+ +FL ++EE+I++++R +E H +E +V ++ P+ +G E +D N
Sbjct: 256 KLLKLDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNH 315
Query: 380 GIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKP 559
IV ++ GS +YV LS +D++LL+P +V L+ +A+V VL +AD +++++ ++ P
Sbjct: 316 AIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAP 375
Query: 560 DVQYSDIGGMDTQKQEIRGSC*TP 631
Y+DIGG+DTQ QEI+ S P
Sbjct: 376 QESYADIGGLDTQIQEIKESVELP 399
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 71.7 bits (168), Expect = 5e-13
Identities = 37/141 (26%), Positives = 74/141 (52%)
Frame = +2
Query: 191 EDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVD 370
E +YKK L+ + + ++++ ++ KEY ++ ++K +QSV ++G+ + +
Sbjct: 8 EKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLT 67
Query: 371 QNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQAD 550
+ IV +T G Y V +D+ LK VAL + ++ LP E D + + +
Sbjct: 68 EEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 127
Query: 551 EKPDVQYSDIGGMDTQKQEIR 613
+ ++ YSD+GG+ Q +E+R
Sbjct: 128 DPGNISYSDVGGLSEQIRELR 148
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +2
Query: 383 IVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 562
++ ++T Y++ + ++ E L P V ++K S +++ LP E DS + ++ DE+P
Sbjct: 91 VIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 150
Query: 563 VQYSDIGGMDTQKQEI 610
QYSDIGG+D Q QE+
Sbjct: 151 EQYSDIGGLDQQIQEM 166
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2
Query: 506 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIRGSC*TP 631
LPP+ D +++M+Q +EKPDV YSDIGG Q ++R TP
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETP 103
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 0.81
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +2
Query: 185 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 331
E++ L + + R L +LE + E ++ E+ LKK++ ++++E +++
Sbjct: 1867 ENDRLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRA 1915
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 206 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 340
+Y+ Q ++F +V+EE K +Q N+K A+EE +R +S +
Sbjct: 148 EYENKQLRMDFEKVEEEVEKWKQNNMKLTATRAREEQQRAKSTAM 192
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 188 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 331
+++L + ++ LE L+ Q IKDE NLK+ Q+E+ +++
Sbjct: 1347 TDNLQASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLEN 1394
>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1533
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/69 (28%), Positives = 29/69 (42%)
Frame = +2
Query: 242 EVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVR 421
E+ E I D K+YL EE+ ++ LVIG + V +N T +
Sbjct: 684 EMLPEDITDGVSIQYKQYLKKDEELSSVEEPQLVIGGEEDRVSKNDNDANLATDAGVVHT 743
Query: 422 XLSTIDREL 448
+DREL
Sbjct: 744 PNDGVDREL 752
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 524 SSISMLQADEKPDVQYSDIGGMDTQKQEI 610
S + A + PD+ + D+GG+D+ K+EI
Sbjct: 796 SHADAIGAPKIPDISWKDVGGLDSVKEEI 824
>SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 543 CNIEIELSASGGKTSTRALECLCRATEA--DGFNNSLSIV 430
CNI+IE GG TS+RA A + + NSL++V
Sbjct: 22 CNIQIEFLQPGGSTSSRASATAVELQFALYESYYNSLAVV 61
>SB_35688| Best HMM Match : COX2_TM (HMM E-Value=8.8)
Length = 159
Score = 28.7 bits (61), Expect = 4.3
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Frame = +2
Query: 35 DNQIIIR*YTKSLSYRNNGRDWNYFTRXKMTKSQXSKGLAFAGPQSFDELESEDLYTKYK 214
DN +I + +K+ G DW+ R K+ + + + + LES +T Y+
Sbjct: 36 DNDMITKNISKAKELIEEGGDWDRRNRLKVYQGIYFMSIRDFKAAASNFLESISTFTSYE 95
Query: 215 KLQ-RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 355
+ + + I E+ +L+K+ ++ E ++ + +P VI QF
Sbjct: 96 LMDYQTFVTNTILTSMISLERVDLRKKVINGAEILEVLHQLP-VIKQF 142
>SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)
Length = 223
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDQIREE 49
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 218 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVG 391
+Q + E ++ E+ + + + KE+ + V+ + V+GQ ++VD+ G+VG
Sbjct: 2 VQSIDEKVQDAEQKVTKGFQEVGKEFQVVGQHVQSVDEKVGVVGQHVQSVDEKVGVVG 59
>SB_59534| Best HMM Match : AA_permease (HMM E-Value=3.1e-05)
Length = 889
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +2
Query: 113 RXKMTKSQXSKGLAFAGPQSFDELESEDLYTKYK--KLQRMLEFLEV-----QEEYIK-- 265
R K + KG A Q D + L + K + Q ML++LE E +K
Sbjct: 261 REKERHIERLKGAAVLNIQIEDNKQQRLLEEEKKDQETQAMLQYLERLKDEDMEALVKKH 320
Query: 266 DEQRNLKKEYLHAQEEVKRIQSV 334
+ Q+NL KE A EE+KR V
Sbjct: 321 ETQKNLMKEVAKANEEIKRQSEV 343
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 37 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREE 78
>SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)
Length = 297
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREE 49
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 171 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREE 212
>SB_18890| Best HMM Match : OCIA (HMM E-Value=6.3)
Length = 310
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 293 YLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDREL 448
YL E++ + LVIG + V +N + TT + + +DREL
Sbjct: 152 YLKKDEKLSSVDEPQLVIGGKYDRVSKNDNLANLTTDAGVVHTPNNGVDREL 203
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 171 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREE 212
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 212 KKLQRMLEFLEVQEEYIKDEQRNLKKEYLH--AQEEVKRIQSVPLVIGQFXEAVDQNTGI 385
KK+ +LE + + + I +E + +KK H + K++ + E+V++N G+
Sbjct: 188 KKMAEILEEIGISPDRIHEESQQIKKPSFHDCTNKPAKKMTPRSVSSPSMMESVNEN-GL 246
Query: 386 VGST 397
GST
Sbjct: 247 PGST 250
>SB_361| Best HMM Match : DUF1122 (HMM E-Value=0.5)
Length = 528
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 293 YLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDREL 448
YL E++ + LVIG + V +N + TT + + +DREL
Sbjct: 370 YLKKDEKLSSVDEPQLVIGGKYDRVSKNDNLANLTTDAGVVHTPNNGVDREL 421
>SB_26818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +2
Query: 101 NYFTRXKMTKSQXSKGLAF-AGPQSFDELESEDLYTKYKKLQR 226
++FT +T + + A +SFD+L SE LY+++K+ ++
Sbjct: 5 DFFTELSLTSPDKNNLVRLKAISKSFDDLTSETLYSRWKRTRK 47
>SB_3407| Best HMM Match : TPX2 (HMM E-Value=2.9e-09)
Length = 787
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 164 PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 334
P SF++ E L K KK+Q E LE +++ K E NL+ E + + K + SV
Sbjct: 602 PFSFEQRNKEALAKKEKKIQ---EMLEEEKKATKFEPFNLETENRGSVKAEKWLNSV 655
>SB_35866| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 758
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 6/104 (5%)
Frame = +2
Query: 206 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNT-- 379
K K++ R + LE + + E+RN++K+YL Q E + + S L + + NT
Sbjct: 621 KRKEIWREIRELETILKDVHKEKRNIEKKYLAFQHENREL-SRSLNSSRSPTGLSPNTSP 679
Query: 380 ----GIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALV 499
G++ + G L ++ L+K S + K N+ V
Sbjct: 680 NRGIGMLVVSPGKTRTASLLERVNNLLMKTSMPNGVKKELNSPV 723
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 27.9 bits (59), Expect = 7.6
Identities = 9/21 (42%), Positives = 18/21 (85%)
Frame = +2
Query: 551 EKPDVQYSDIGGMDTQKQEIR 613
EKP+V++SDI G+++ K+ ++
Sbjct: 90 EKPNVKWSDIAGLESAKEALK 110
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,893,161
Number of Sequences: 59808
Number of extensions: 293595
Number of successful extensions: 1085
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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