Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1034
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 219 2e-57
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 97 7e-21
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 69 2e-12
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 69 3e-12
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 69 3e-12
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 64 6e-11
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 64 6e-11
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 33 0.23
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 31 0.71
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 31 0.71
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 31 0.71
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 2.2
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 2.2
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 2.2
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 2.2
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 2.2
Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical p... 29 2.9
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 29 2.9
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.9
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 29 2.9
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 29 2.9
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.8
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 5.0
AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical... 28 5.0
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 28 6.6
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 6.6
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.7
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 27 8.7
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 27 8.7
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 219 bits (534), Expect = 2e-57
Identities = 107/142 (75%), Positives = 117/142 (82%)
Frame = +2
Query: 188 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAV 367
S D Y K L+R L L+V E+YIK E RNL+KE LHAQEEVKRIQSVPLVIGQF EAV
Sbjct: 33 SSDDYIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAV 92
Query: 368 DQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 547
DQN IVGSTTGSNYYVR LS +DRELLKP SVALHK+SNALVDVLPPEADSSI ML+
Sbjct: 93 DQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRP 152
Query: 548 DEKPDVQYSDIGGMDTQKQEIR 613
DEKPD+ Y DIGG+D QKQE+R
Sbjct: 153 DEKPDISYGDIGGLDMQKQEVR 174
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 97.5 bits (232), Expect = 7e-21
Identities = 43/138 (31%), Positives = 84/138 (60%), Gaps = 2/138 (1%)
Frame = +2
Query: 206 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK--RIQSVPLVIGQFXEAVDQNT 379
K K +R+ ++L +++E+I++++R +E +E K ++ P+ +G E +D
Sbjct: 64 KLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQH 123
Query: 380 GIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKP 559
IV + GS +YV +S +D+E L+P SV L+ ++A++ VL + D +S+++ ++ P
Sbjct: 124 AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAP 183
Query: 560 DVQYSDIGGMDTQKQEIR 613
Y+D+GG+D Q QEI+
Sbjct: 184 QETYADVGGLDQQIQEIK 201
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 69.3 bits (162), Expect = 2e-12
Identities = 38/160 (23%), Positives = 85/160 (53%)
Frame = +2
Query: 134 QXSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 313
Q S + GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ +
Sbjct: 5 QFSNMVEPTGPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSEND 63
Query: 314 VKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNA 493
+K +QSV ++G+ + + + IV +T G Y V +I++E LK V+L +
Sbjct: 64 IKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLT 123
Query: 494 LVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIR 613
++ LP E D + + ++ ++ YSD+GG+ Q +E+R
Sbjct: 124 IMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELR 163
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 68.9 bits (161), Expect = 3e-12
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Frame = +2
Query: 179 ELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFX 358
++ +EDL ++ L + + + + I LK+ E +K +++P ++
Sbjct: 28 KMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKTLPYLVSNVV 87
Query: 359 EAVD--QNT----------------GIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKH 484
E +D NT ++ ++T + Y++ + +D + LKP V ++K
Sbjct: 88 ELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKD 147
Query: 485 SNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEI 610
S +++ LP E DS + ++ DE+P QYSDIGG D Q QE+
Sbjct: 148 SYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQEL 189
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/151 (23%), Positives = 82/151 (54%)
Frame = +2
Query: 161 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 340
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 6 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 64
Query: 341 VIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEA 520
++G+ + + + IV +T G Y V +I++E LK V+L + ++ LP E
Sbjct: 65 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 124
Query: 521 DSSISMLQADEKPDVQYSDIGGMDTQKQEIR 613
D + + ++ ++ YSD+GG+ Q +E+R
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGGLAEQIRELR 155
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/137 (24%), Positives = 69/137 (50%)
Frame = +2
Query: 203 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTG 382
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 31 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 90
Query: 383 IVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 562
+V + Y V +++D L VAL + A+ +VLP + D +S++ ++ PD
Sbjct: 91 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 150
Query: 563 VQYSDIGGMDTQKQEIR 613
Y +GG+DTQ +EI+
Sbjct: 151 STYEMVGGLDTQIKEIK 167
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 64.5 bits (150), Expect = 6e-11
Identities = 33/137 (24%), Positives = 69/137 (50%)
Frame = +2
Query: 203 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTG 382
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 52 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 111
Query: 383 IVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 562
+V + Y V +++D L VAL + A+ +VLP + D +S++ ++ PD
Sbjct: 112 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 171
Query: 563 VQYSDIGGMDTQKQEIR 613
Y +GG+DTQ +EI+
Sbjct: 172 STYEMVGGLDTQIKEIK 188
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 58.0 bits (134), Expect = 5e-09
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +2
Query: 272 QRN-LKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDREL 448
QRN L + +EE++++ +G+ +A+D+ +V Y V +ID
Sbjct: 58 QRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINS 117
Query: 449 LKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIR 613
L A VAL S AL +LP + D +S++ ++ PD Y +GG+D Q +EI+
Sbjct: 118 LNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIK 172
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 55.2 bits (127), Expect = 4e-08
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Frame = +2
Query: 215 KLQRMLEFLEVQEEYIKDEQ----RNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTG 382
K+ R+ ++L++++E+I + R L + Q+ V+ ++ P + + E D
Sbjct: 52 KMNRIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKH 111
Query: 383 IVGSTTGSN--YYVRXLSTIDRELLKPSASVALHKHS------NALVDVLPPEADSSISM 538
V GS +YV LS +D++LL+ +A V + +A+V VL + DS+
Sbjct: 112 AVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMG 171
Query: 539 LQADEKPDVQYSDIGGMDTQKQEIRGSC*TP 631
+ ++ P + DIGG ++Q QE++ S P
Sbjct: 172 HKVEKTPKETFDDIGGCESQIQELKESVELP 202
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = +2
Query: 506 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIRGSC*TP 631
LP + D +++M+Q +EKPDV YSD+GG Q +++R TP
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETP 196
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/87 (26%), Positives = 41/87 (47%)
Frame = +2
Query: 230 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFXEAVDQNTGIVGSTTGSN 409
+E L + E I D + L + + +EE K+I+ + + + A +G+ G G N
Sbjct: 780 VECLRLLNEIISDFDQIL--DQILDREEFKKIEKIKTISTTYMVA----SGLAGRECGDN 833
Query: 410 YYVRXLSTIDRELLKPSASVALHKHSN 490
+V ++ RELL S +H +N
Sbjct: 834 SHVEAIALFARELLVKLESTNIHSFNN 860
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 326 QSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDV 505
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 506 LPPEAD 523
P D
Sbjct: 503 TPKPTD 508
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 326 QSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDV 505
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 506 LPPEAD 523
P D
Sbjct: 503 TPKPTD 508
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 326 QSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDV 505
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 506 LPPEAD 523
P D
Sbjct: 503 TPKPTD 508
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 31.1 bits (67), Expect = 0.71
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = +2
Query: 326 QSVPLVIGQFXEAVDQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDV 505
+++PL GQ E D N+ + N++ S + RE P+ V ++H A
Sbjct: 443 ETIPLTYGQIDEIPDDNSQSLPQRQMRNWFKCDASQLPREPTYPTNFVDSYQHQPAATTT 502
Query: 506 LPPEAD 523
P D
Sbjct: 503 TPKPTD 508
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 RDWNYFTRXKMTKSQXSKGLAFAG-PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD 268
++W +MT+ L L ++ K + + +++E EE D
Sbjct: 1383 KEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLMEMEPQLEELHPD 1442
Query: 269 EQRNLKKEYLHAQEEVKRIQS 331
E N+K L QE+++R+Q+
Sbjct: 1443 ELENIKAHRLAVQEQLQRLQA 1463
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 RDWNYFTRXKMTKSQXSKGLAFAG-PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD 268
++W +MT+ L L ++ K + + +++E EE D
Sbjct: 1383 KEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLMEMEPQLEELHPD 1442
Query: 269 EQRNLKKEYLHAQEEVKRIQS 331
E N+K L QE+++R+Q+
Sbjct: 1443 ELENIKAHRLAVQEQLQRLQA 1463
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 RDWNYFTRXKMTKSQXSKGLAFAG-PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD 268
++W +MT+ L L ++ K + + +++E EE D
Sbjct: 1383 KEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLMEMEPQLEELHPD 1442
Query: 269 EQRNLKKEYLHAQEEVKRIQS 331
E N+K L QE+++R+Q+
Sbjct: 1443 ELENIKAHRLAVQEQLQRLQA 1463
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 RDWNYFTRXKMTKSQXSKGLAFAG-PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD 268
++W +MT+ L L ++ K + + +++E EE D
Sbjct: 1383 KEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLMEMEPQLEELHPD 1442
Query: 269 EQRNLKKEYLHAQEEVKRIQS 331
E N+K L QE+++R+Q+
Sbjct: 1443 ELENIKAHRLAVQEQLQRLQA 1463
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 92 RDWNYFTRXKMTKSQXSKGLAFAG-PQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD 268
++W +MT+ L L ++ K + + +++E EE D
Sbjct: 1383 KEWATQLENEMTREDQPGDLTTVNVAMQKQHLIETEMIKKAQHIDQLMEMEPQLEELHPD 1442
Query: 269 EQRNLKKEYLHAQEEVKRIQS 331
E N+K L QE+++R+Q+
Sbjct: 1443 ELENIKAHRLAVQEQLQRLQA 1463
>Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical
protein T22C1.11 protein.
Length = 444
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 245 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 349
V+EE + E+ ++ KEY A + V +++ + LV+G
Sbjct: 216 VEEEVAQIEEEDVSKEYFDASKFVAQLEEMGLVLG 250
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 368 DQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 547
+Q G+ S Y++R + T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 548 DEKPD 562
KPD
Sbjct: 138 KMKPD 142
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 224 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 224 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 224 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 582 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 224 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 368 DQNTGIVGSTTGSNYYVRXLSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 547
+Q G+ S Y++R + T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 548 DEKPD 562
KPD
Sbjct: 138 KMKPD 142
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +2
Query: 107 FTRXKMTKSQXSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 286
F + KS+ SK + +F+ +E E L TKY L + EFL+ + +++ K
Sbjct: 234 FVEKRNKKSRKSK---ISESSAFEVIEKEKLVTKYTSLLNIQEFLKTEGYTLENADIIFK 290
Query: 287 KEYLHAQEEVKRIQ 328
+ ++++++++
Sbjct: 291 NMEVKFEKQMEQLR 304
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 346
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 346
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 346
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 347 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 404
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 333 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 229
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3
Query: 333 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 229
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 346
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 179 ELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK--EYLHAQEEVKRIQ 328
E E+E+ K ++ +E ++ +EE +K E+ +KK E L A+EE +++
Sbjct: 889 EKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE 940
>AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical
protein T05H4.2 protein.
Length = 405
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 122 MTKSQXSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 286
M + S GL G ELE ED YKK + +++ + E +KD R LK
Sbjct: 148 MYLEEKSVGLKTNGGYVTYELEDEDCQVNYKKRKMIVKDKKPLEVAMKDVSRLLK 202
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 212 KKLQRMLEFLEVQEEYIKDEQR---NLKKEYLHAQEEVKRIQS 331
KKLQ + + +EVQ+E IK+ + NL+K + E+K +S
Sbjct: 324 KKLQELRDEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSES 366
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = -3
Query: 369 STASXNCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSC 247
S + N M+RG C T Y K +CS +Y+ C
Sbjct: 462 SENACNANMSRGNGCKGSTQRSMWFYDKSKKKCSQFVYNGC 502
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 176 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 328
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -3
Query: 390 PTMPVF*STASXNCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSCTS 241
PT + A +CP T G C T SC F + C+S+ + C S
Sbjct: 88 PTSKDAKTAAIAHCPKTCGLCCQTSTYSCQ-NAPFPRLNCASVTKAMCLS 136
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 38 NQIIIR*YTKSLSYRNNGRDWNYFT 112
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 38 NQIIIR*YTKSLSYRNNGRDWNYFT 112
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,903,874
Number of Sequences: 27780
Number of extensions: 237658
Number of successful extensions: 976
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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