Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-1033
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6R7Z7 Cluster: Putative uncharacterized protein; n=3; ...    33   5.1  
UniRef50_A6QZR6 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  

>UniRef50_A6R7Z7 Cluster: Putative uncharacterized protein; n=3;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 1242

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 364 IIYLDDLLYYARR*EPTARHLKTCYRRLR 450
           I+YLDD+L Y++  E   +HL+  + RLR
Sbjct: 498 IVYLDDILIYSQNTEDHTKHLRLIFERLR 526


>UniRef50_A6QZR6 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 1164

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +1

Query: 364 IIYLDDLLYYARR*EPTARHLKTCYRRLR 450
           I+YLDD+L Y++  E   +HL+  + RLR
Sbjct: 461 IVYLDDILIYSQNTEDHTKHLRLIFERLR 489


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,210,331
Number of Sequences: 1657284
Number of extensions: 9225675
Number of successful extensions: 14796
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 14439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14795
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)