Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1030
(600 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 370 e-105
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 224 5e-61
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 154 6e-40
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 130 9e-33
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 2.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 4.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 6.0
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 370 bits (911), Expect = e-105
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 370 bits (911), Expect = e-105
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 370 bits (911), Expect = e-105
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 376 RLRGGMQIFVK 386
Score = 370 bits (911), Expect = e-105
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 424 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 483
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 484 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 543
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 544 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 603
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 604 RLRGGMQIFVK 614
Score = 368 bits (905), Expect = e-104
Identities = 182/191 (95%), Positives = 184/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 331
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 391
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 392 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 452 RLRGGMQIFVK 462
Score = 368 bits (905), Expect = e-104
Identities = 182/191 (95%), Positives = 184/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 407
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 408 AKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 467
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 468 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 527
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 528 RLRGGMQIFVK 538
Score = 364 bits (895), Expect = e-103
Identities = 180/185 (97%), Positives = 180/185 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 500 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 559
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 560 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 619
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 620 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 679
Query: 541 RLXGG 555
RL GG
Sbjct: 680 RLRGG 684
Score = 303 bits (745), Expect = 5e-85
Identities = 150/158 (94%), Positives = 152/158 (96%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTLSDYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 158
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 224 bits (547), Expect = 5e-61
Identities = 109/112 (97%), Positives = 109/112 (97%)
Frame = +1
Query: 184 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 363
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT 60
Query: 364 ITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKE 519
ITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQL DGRTLSDYNIQKE
Sbjct: 61 ITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
Score = 194 bits (474), Expect = 4e-52
Identities = 95/97 (97%), Positives = 95/97 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 16 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 75
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 291
AKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKE
Sbjct: 76 AKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYNIQKE 112
Score = 102 bits (244), Expect = 3e-24
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +1
Query: 412 KIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
KIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV RL GGM IF++
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 54
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 154 bits (373), Expect = 6e-40
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGG 327
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 147 bits (356), Expect = 7e-38
Identities = 72/76 (94%), Positives = 72/76 (94%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 508 IQKESTLHLVXRLXGG 555
IQKESTLHLV RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 70.9 bits (166), Expect = 8e-15
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 99
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 130 bits (314), Expect = 9e-33
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKE 291
IQKE
Sbjct: 61 IQKE 64
Score = 128 bits (308), Expect = 5e-32
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 508 IQKE 519
IQKE
Sbjct: 61 IQKE 64
Score = 47.2 bits (107), Expect = 1e-07
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKE 63
IFAGKQLEDGRTLSDYNIQKE
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKE 64
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.0 bits (47), Expect = 2.0
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -1
Query: 165 GVRCFNFQCD-GFTGKCFHKNLH 100
G RC QC GFTGK H+N++
Sbjct: 51 GHRC---QCQPGFTGKYCHENIN 70
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.8 bits (44), Expect = 4.6
Identities = 11/44 (25%), Positives = 18/44 (40%)
Frame = -3
Query: 334 SACHHAVSKPNAE*ILSGCCSQIMYDHLQAVCPQKSIAADLGEF 203
S C + ++ ++ L+G Q H CP D GE+
Sbjct: 56 SNCQNRINLCDSSPCLNGATCQDHTTHYTCHCPYGYTGKDCGEY 99
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.0
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 329 MPPRSLKTKCRVDSFW 282
+PP K+ C++D W
Sbjct: 119 VPPGIFKSTCKIDITW 134
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.316 0.137 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,910
Number of Sequences: 336
Number of extensions: 3189
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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