Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1030
(600 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 370 e-103
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 370 e-103
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 233 1e-61
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 6e-38
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 128 3e-30
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 89 3e-18
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 58 4e-09
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 45 5e-05
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11) 40 0.002
SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12) 40 0.002
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 37 0.011
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 36 0.019
SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.076
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 33 0.18
SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01) 32 0.41
SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055) 31 0.94
SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32) 30 1.2
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 30 1.6
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 30 1.6
SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012) 29 2.9
SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18) 29 2.9
SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5) 29 3.8
SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12) 28 6.6
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 376 RLRGGMQIFVK 386
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 272 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 331
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 391
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 392 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 451
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 452 RLRGGMQIFVK 462
Score = 364 bits (895), Expect = e-101
Identities = 180/185 (97%), Positives = 180/185 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 348 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 407
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 408 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 467
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 468 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 527
Query: 541 RLXGG 555
RL GG
Sbjct: 528 RLRGG 532
Score = 303 bits (745), Expect = 5e-83
Identities = 150/158 (94%), Positives = 152/158 (96%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTLSDYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 158
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 370 bits (911), Expect = e-103
Identities = 183/191 (95%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 120 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 364 bits (895), Expect = e-101
Identities = 180/185 (97%), Positives = 180/185 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVK
Sbjct: 196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 375
Query: 541 RLXGG 555
RL GG
Sbjct: 376 RLRGG 380
Score = 303 bits (745), Expect = 5e-83
Identities = 150/158 (94%), Positives = 152/158 (96%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTLSDYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK 158
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 233 bits (569), Expect = 1e-61
Identities = 116/145 (80%), Positives = 129/145 (88%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK KIQ++EGIPP QRL+
Sbjct: 61 IQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLL 119
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHL 534
+ ++L D R+L+DYNI++ S LHL
Sbjct: 120 YEEEELVDNRSLADYNIKQGSILHL 144
Score = 150 bits (364), Expect = 7e-37
Identities = 74/79 (93%), Positives = 74/79 (93%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 508 IQKESTLHLVXRLXGGMXI 564
IQKESTLHLV RL GGM I
Sbjct: 61 IQKESTLHLVLRLRGGMQI 79
Score = 150 bits (364), Expect = 7e-37
Identities = 75/104 (72%), Positives = 88/104 (84%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI VK KT TL+VEASDT+E+VK
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQISVKA-HWKTFTLDVEASDTVESVK 102
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 312
KIQ++EGIPP QRL++ ++L D R+L+DYNI++ S LHL L
Sbjct: 103 EKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGSILHLFL 146
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 154 bits (373), Expect = 6e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 280 IQKESTLHLVLRLRGG 327
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 147 bits (356), Expect = 7e-36
Identities = 72/76 (94%), Positives = 72/76 (94%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 508 IQKESTLHLVXRLXGG 555
IQKESTLHLV RL GG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 70.9 bits (166), Expect = 7e-13
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 99
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 44 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 128 bits (310), Expect = 3e-30
Identities = 63/67 (94%), Positives = 63/67 (94%)
Frame = +1
Query: 88 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 267
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 268 SDYNIQK 288
SDYNIQK
Sbjct: 135 SDYNIQK 141
Score = 126 bits (304), Expect = 1e-29
Identities = 62/67 (92%), Positives = 62/67 (92%)
Frame = +1
Query: 316 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTL 495
L MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL
Sbjct: 75 LTSTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 134
Query: 496 SDYNIQK 516
SDYNIQK
Sbjct: 135 SDYNIQK 141
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQK 60
IFAGKQLEDGRTLSDYNIQK
Sbjct: 122 IFAGKQLEDGRTLSDYNIQK 141
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 88.6 bits (210), Expect = 3e-18
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +1
Query: 205 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 330
IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 81.8 bits (193), Expect = 4e-16
Identities = 38/42 (90%), Positives = 39/42 (92%)
Frame = +1
Query: 433 IPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGM 558
IPPDQQRLIFAGKQL DGRTLSDYNIQKESTLHLV RL GG+
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 102
IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 10 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV 43
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 58.4 bits (135), Expect = 4e-09
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 106 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 282
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 283 QKESTLHLVLRLRGG 327
+TLHL++RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +1
Query: 334 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNI 510
I V TLTG+ I + ++ TI VK I+ K G P DQQRL+F G+ L D T I
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 511 QKESTLHLVXRLXGG 555
+TLHL+ RL GG
Sbjct: 133 FAGATLHLIVRLLGG 147
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLEDGRTLS 270
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 271 DYNIQKES 294
+YNI ++S
Sbjct: 127 EYNIDEKS 134
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQ---DKEGIPPDQQRLIFAGKQLXDGRTLS 498
M I KTL +T +E+ +T+ +K KI+ K+ P +LI+AGK L D L
Sbjct: 67 MIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILNDDNPLK 126
Query: 499 DYNIQKES 522
+YNI ++S
Sbjct: 127 EYNIDEKS 134
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/124 (26%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +1
Query: 55 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 228
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 229 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 408
I G+ ++ N ES L +R G ++ L+G+ + L E +T++ K
Sbjct: 79 II-------GKKMAKPN---ESLLQCKVR-ETGFTAYLYLLSGRNVELTREDVETLKLQK 127
Query: 409 AKIQ 420
K Q
Sbjct: 128 QKTQ 131
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 283 QKESTLHLVLRLRGGMQIFVKT--LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 456
QK+ST+ ++ +++ V+ +G L++ + TIE ++ ++ DK G PP QR
Sbjct: 19 QKQSTVEVIKEKTVRLRVVVEDSETSGGAFNLQIPLNTTIEKLQNEVADKYGFPPKVQRW 78
Query: 457 IFAGKQLXDGRTLSDYNIQK 516
I K +L +++
Sbjct: 79 IIGKKMAKPNESLLQCKVRE 98
>SB_25220| Best HMM Match : Ank (HMM E-Value=6.2e-11)
Length = 744
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 508 IQK 516
+++
Sbjct: 67 LKQ 69
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 103 QIFVKTLTGKTITLEVEASDT-IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
Q+F T TL +D + +K++I+ K GIP D QRL F K+L D TL+ N
Sbjct: 7 QVFAALPTEDVCTLRDLTTDMHVFQLKSRIELKTGIPGDIQRLHFMNKELYDDATLAKVN 66
Query: 280 IQK 288
+++
Sbjct: 67 LKQ 69
>SB_1967| Best HMM Match : ubiquitin (HMM E-Value=4.7e-12)
Length = 348
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED-GRTLSDY 276
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 277 NIQKESTLHLVLR 315
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXD-GRTLSDY 504
M++ V G TL+V +EN +A ++ + G+P + L G QL D +TL+ Y
Sbjct: 1 MKVTVTGEDGSIFTLDVSVDLEVENFRALLEFESGVPASEISLYHDGVQLSDLKKTLTAY 60
Query: 505 NIQKESTLHLVXR 543
++++ + +V R
Sbjct: 61 SVKENDVILMVRR 73
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 37.1 bits (82), Expect = 0.011
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +1
Query: 142 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH-LVLRL 318
LE+ + T+ N+K ++ G+P + Q + D L D+ K++ H L+L
Sbjct: 19 LEIASDKTVYNLKLICEEHFGVPVELQAIYLVD---NDDVELQDWACLKDAATHTFKLQL 75
Query: 319 RGGMQIFVKTLTGKTI-TLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTL 495
F L I LE+ + T+ N+K ++ G+P + Q + D L
Sbjct: 76 MESAAKFEVLLPNDDIECLEIASDKTVYNLKLICEEHFGVPVELQAIYLVDN---DDVEL 132
Query: 496 SDYNIQKESTLH 531
D+ K++ H
Sbjct: 133 QDWACLKDAATH 144
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQ+ VKTL +T T V +EGIP ++QRLIF GK L+D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
Score = 35.1 bits (77), Expect = 0.044
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQ+ VKTL +T T V +EGIP ++QRLIF GK L D + L +++
Sbjct: 1 MQVTVKTLDSETRTFTVS--------------EEGIPAERQRLIFKGKVLQDEKKLKEFD 46
>SB_49791| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 201
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
Score = 34.3 bits (75), Expect = 0.076
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 429
M ++++TLTG L V +TI +VKAKIQ E
Sbjct: 1 MDLYIQTLTGTAFELRVSPFETIMSVKAKIQRLE 34
>SB_42868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 34.3 bits (75), Expect = 0.076
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +1
Query: 226 LIFAGKQLEDGRTLSDYNIQKESTLH--LVLRLRGGMQIFVKTLTGKTITLEVEAS---D 390
L +AG LED +D I TL L+ + + + +G+ + S
Sbjct: 27 LNYAGGVLEDDWIFADIGIPPGVTLRCELIQNTKSYLNVHC-AYSGEIVKFTEPMSLFDT 85
Query: 391 TIENVKAKIQDKEGIPPDQQRLIFA-GKQLXDGRTLSDYNIQKESTLHL 534
T+ ++K + +K G+ RL+ GK++ D L DYNI T+ L
Sbjct: 86 TVGDLKTMVTNKTGLHVSVFRLVIPEGKEMFDCNLLKDYNISTGDTIRL 134
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 202 GIPPDQQRLIFAGKQLEDGRTLSDYN 279
GIP ++QRLIF GK L+D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
Score = 31.9 bits (69), Expect = 0.41
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 430 GIPPDQQRLIFAGKQLXDGRTLSDYN 507
GIP ++QRLIF GK L D + L +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEFD 26
>SB_22742| Best HMM Match : ubiquitin (HMM E-Value=0.01)
Length = 792
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = +1
Query: 106 IFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 285
+ ++T G T+ +E+ ++E++KA+ + + GIP + RL LED + +
Sbjct: 185 MLLQTRGGSTLEIEITERTSVEDLKAEAELRVGIPVELIRLQVNKVNLEDSEKICERGHL 244
Query: 286 KEST 297
+++T
Sbjct: 245 QKAT 248
>SB_54258| Best HMM Match : ubiquitin (HMM E-Value=0.00055)
Length = 411
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 109 FVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 288
FV G+ ITL + ++ + G P + ++ K LED T++D + Q
Sbjct: 169 FVVMPEGQVITLHCNPRQSFSELRNHFSSEFGQPAEAILMLHEDKILEDQGTIADLSHQP 228
Query: 289 ESTLHLVLR 315
+TL + L+
Sbjct: 229 GATLQIELQ 237
>SB_30857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 61 ESTLHLVLRLRGGM 102
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 289 ESTLHLVLRLRGGM 330
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_23330| Best HMM Match : Ribosomal_L40e (HMM E-Value=1.8e-32)
Length = 78
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 61 ESTLHLVLRLRGGM 102
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 289 ESTLHLVLRLRGGM 330
ESTLHLVLRLRGG+
Sbjct: 14 ESTLHLVLRLRGGV 27
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/117 (18%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 88 LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQ-LEDGR 261
++GG+ + + G T+E E + ++ ++Q + G I + Q + +Q ++ G
Sbjct: 310 VQGGVGTIEQEVQGGVETIEQEVQGGVGTIEQEVQGRVGTIEQEVQGEVGTIEQEVQGGV 369
Query: 262 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 432
+ +Q E + + ++GG+ + + G+ T+E E + ++ ++Q G
Sbjct: 370 RTIEQEVQGE-VVTIEQEVQGGVGTIEQEVQGEVKTMEQEVQGVVGTIEQEVQGGVG 425
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 29.9 bits (64), Expect = 1.6
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +1
Query: 112 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY--NIQ 285
+K G+ ++ + +D ENV I+ PD ++ I G L+DG+T+ D + +
Sbjct: 510 LKGKLGRNLSRCILGNDETENV-GNIESS----PDSKKNILEGLDLQDGKTVEDLLSDYR 564
Query: 286 KESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 432
+E L+ ++ G + L + L E S +++ ++DK G
Sbjct: 565 RELELYRQIKDENGTVSRIVNLEKQVNDLSGENS-SLKTTMGDVKDKVG 612
>SB_11656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 355 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXD 483
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 127 GKTITLEVE-ASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 255
G T E+E A +++E + I GIP D+Q L+ G + D
Sbjct: 10 GAMYTFEMEMAMESVETLMGSIASSTGIPVDKQVLLICGGEALD 53
>SB_35206| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=0.012)
Length = 1148
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/65 (23%), Positives = 36/65 (55%)
Frame = +1
Query: 91 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 270
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L+ T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 271 DYNIQ 285
+ +Q
Sbjct: 771 EEKLQ 775
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +1
Query: 319 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLS 498
R +Q ++T GKTI L E + ++ + ++K+G+ + ++L + ++L T +
Sbjct: 711 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLAAEVKQLQKSSEELQQQLTDT 770
Query: 499 DYNIQ 513
+ +Q
Sbjct: 771 EEKLQ 775
>SB_5737| Best HMM Match : DED (HMM E-Value=2.9e-18)
Length = 1719
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = -2
Query: 146 SNVMVLPVSVFTKICIPPLRRSTKCRVDSFWML*SDNVRPSSSCLPAK 3
S + LP S+F+K P++R KC++ W+ + +CLP +
Sbjct: 1544 SKIGYLPKSLFSKDWPMPIKRHVKCKI---WLPRRRQNKQQETCLPCR 1588
>SB_23848| Best HMM Match : H-kinase_dim (HMM E-Value=1.5)
Length = 106
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/65 (23%), Positives = 35/65 (53%)
Frame = +1
Query: 91 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS 270
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L+ T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 271 DYNIQ 285
+ +Q
Sbjct: 67 EEKLQ 71
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +1
Query: 319 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLS 498
R +Q ++T GKTI L E + ++ + ++K+G+ + + L + ++L T +
Sbjct: 7 RDDLQDSLETAEGKTIKLTQELDEKMKLIAGIKEEKQGLVAEVEHLQKSSEELQQQLTDT 66
Query: 499 DYNIQ 513
+ +Q
Sbjct: 67 EEKLQ 71
>SB_40252| Best HMM Match : LRR_1 (HMM E-Value=8.2e-12)
Length = 481
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 121 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 252
L G +IT+ +E D +EN++ +K+ +PP ++L+F + L+
Sbjct: 102 LGGNSITV-IEGLDKLENLRELHMEKQHLPPG-EKLLFDPRTLQ 143
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 177
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 178 KAKIQDKEGIPP 213
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 229 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT-GKTITLEVEASDTIENV 405
+ + + R L + ++ TLHLV LRG I +T + G++ V A I
Sbjct: 326 VVGSRHFDVARMLREVDVTGTITLHLVEPLRGFGAIGPRTASRGQSTEEPVNAEKKIGTG 385
Query: 406 KAKIQDKEGIPP 441
KA ++ K PP
Sbjct: 386 KATLRLKAKGPP 397
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.137 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,165,884
Number of Sequences: 59808
Number of extensions: 394070
Number of successful extensions: 1280
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1451595000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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