Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1030
(600 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 366 e-102
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 366 e-102
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 366 e-102
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 366 e-102
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 366 e-102
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 366 e-102
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 366 e-102
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 366 e-102
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 366 e-102
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 366 e-102
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 359 e-100
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 359 e-100
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 355 1e-98
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 346 6e-96
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 343 4e-95
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 300 4e-82
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 245 2e-65
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 242 1e-64
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 153 6e-38
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 153 1e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 153 1e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 1e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 1e-37
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 128 4e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 119 2e-27
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 2e-20
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 93 2e-19
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 93 2e-19
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 79 3e-15
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 76 2e-14
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 1e-11
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 67 1e-11
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 55 4e-08
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 1e-07
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 5e-07
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 7e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 7e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 7e-07
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 9e-07
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 2e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 2e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 48 4e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 48 4e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 5e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 8e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 47 8e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 47 8e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 45 4e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 45 4e-05
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.001
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 39 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.009
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.009
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.009
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.015
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.015
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.063
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.11
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 0.77
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.0
At1g47680.1 68414.m05297 hypothetical protein 29 3.1
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 28 4.1
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 28 5.4
At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR ... 27 7.2
At2g46950.1 68415.m05864 cytochrome P450 family protein similar ... 27 7.2
At1g77680.1 68414.m09044 ribonuclease II family protein weak sim... 27 7.2
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 27 9.5
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 541 RLXGG 555
RL GG
Sbjct: 376 RLRGG 380
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGG 555
RL GG
Sbjct: 300 RLRGG 304
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGG 555
RL GG
Sbjct: 300 RLRGG 304
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Score = 281 bits (689), Expect = 3e-76
Identities = 137/143 (95%), Positives = 143/143 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKE 429
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKE 262
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 376 RLRGGMQIFVK 386
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Score = 281 bits (689), Expect = 3e-76
Identities = 137/143 (95%), Positives = 143/143 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 331
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 391
Query: 361 TITLEVEASDTIENVKAKIQDKE 429
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 392 TITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Score = 281 bits (689), Expect = 3e-76
Identities = 137/143 (95%), Positives = 143/143 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKE 429
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKE 338
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 375
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 376 RLRGGMQIFVK 386
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Score = 281 bits (689), Expect = 3e-76
Identities = 137/143 (95%), Positives = 143/143 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 331
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 332 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 391
Query: 361 TITLEVEASDTIENVKAKIQDKE 429
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 392 TITLEVESSDTIDNVKAKIQDKE 414
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 300 RLRGGMQIFVK 310
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
Score = 281 bits (689), Expect = 3e-76
Identities = 137/143 (95%), Positives = 143/143 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 255
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 256 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 315
Query: 361 TITLEVEASDTIENVKAKIQDKE 429
TITLEVE+SDTI+NVKAKIQDKE
Sbjct: 316 TITLEVESSDTIDNVKAKIQDKE 338
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGG 555
RL GG
Sbjct: 300 RLRGG 304
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 366 bits (900), Expect = e-102
Identities = 178/191 (93%), Positives = 187/191 (97%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 224 RLRGGMQIFVK 234
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 179
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 180 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 239
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 240 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299
Query: 541 RLXGG 555
RL GG
Sbjct: 300 RLRGG 304
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGG 555
RL GG
Sbjct: 224 RLRGG 228
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 359 bits (884), Expect = e-100
Identities = 175/185 (94%), Positives = 182/185 (98%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGG 555
RL GG
Sbjct: 224 RLRGG 228
Score = 300 bits (737), Expect = 4e-82
Identities = 146/158 (92%), Positives = 154/158 (97%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 355 bits (874), Expect = 1e-98
Identities = 176/191 (92%), Positives = 185/191 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGK 162
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKE IPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 163 TITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 222
Query: 541 RLXGGMXIFLE 573
RL GGM IF++
Sbjct: 223 RLRGGMQIFVK 233
Score = 303 bits (743), Expect = 7e-83
Identities = 151/162 (93%), Positives = 157/162 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 120 IFAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 178
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKE IPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 179 AKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 238
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDG 486
TITLEVE+S TI+NVKAKIQDKEGIPPDQQRLIFAGKQL G
Sbjct: 239 TITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
Score = 293 bits (719), Expect = 6e-80
Identities = 145/158 (91%), Positives = 153/158 (96%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+D NIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVK 157
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 346 bits (851), Expect = 6e-96
Identities = 167/185 (90%), Positives = 179/185 (96%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYN+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+K
Sbjct: 44 IFAGKQLEDGRTLADYNVQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGK
Sbjct: 104 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGK 163
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TITLEVE+SDTI+NVKAKIQDKEGI PDQQRLIFAGKQ DGRTL+DYNIQKESTLHLV
Sbjct: 164 TITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQKESTLHLVL 223
Query: 541 RLXGG 555
RL GG
Sbjct: 224 RLRGG 228
Score = 282 bits (691), Expect = 1e-76
Identities = 135/158 (85%), Positives = 149/158 (94%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFLE 573
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF++
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVK 158
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 343 bits (844), Expect = 4e-95
Identities = 168/199 (84%), Positives = 184/199 (92%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IF+GK L+DGRTL+DY+IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK
Sbjct: 46 IFSGKLLDDGRTLADYSIQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK 105
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT K
Sbjct: 106 AKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRK 165
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVX 540
TI LEVE+SDT +NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV
Sbjct: 166 TIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 225
Query: 541 RLXGGMXIFLENTYPVKPL 597
RL GGM IF+ NT K +
Sbjct: 226 RLCGGMQIFV-NTLTGKTI 243
Score = 329 bits (809), Expect = 7e-91
Identities = 164/186 (88%), Positives = 174/186 (93%), Gaps = 1/186 (0%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVK
Sbjct: 122 IFAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVK 181
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV TLTGK
Sbjct: 182 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGK 241
Query: 361 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDG-RTLSDYNIQKESTLHLV 537
TITLEVE+SDTI+NVKAKIQDKE I PDQQRLIFAG+QL DG TL+DYNIQKESTLHLV
Sbjct: 242 TITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQKESTLHLV 301
Query: 538 XRLXGG 555
RL GG
Sbjct: 302 LRLRGG 307
Score = 266 bits (653), Expect = 6e-72
Identities = 130/157 (82%), Positives = 143/157 (91%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLI
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFL 570
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF+
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFV 159
Score = 120 bits (289), Expect = 7e-28
Identities = 59/82 (71%), Positives = 68/82 (82%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 508 IQKESTLHLVXRLXGGMXIFLE 573
IQK+S LHL RL GGM IF++
Sbjct: 63 IQKDSILHLALRLRGGMQIFVK 84
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 300 bits (737), Expect = 4e-82
Identities = 154/199 (77%), Positives = 172/199 (86%), Gaps = 7/199 (3%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDG TL+DYNIQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVK
Sbjct: 46 IFAGKQLEDGLTLADYNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVK 105
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK 360
AKIQDKEGI P QQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV T +GK
Sbjct: 106 AKIQDKEGILPRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGK 165
Query: 361 -----TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--XDGRTLSDYNIQKE 519
T+TL+VE+SDTIENVKAKIQD+EG+ PD QRLIF G++L D RTL+DY I+
Sbjct: 166 NFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNR 225
Query: 520 STLHLVXRLXGGMXIFLEN 576
STL L RL G M IF++N
Sbjct: 226 STLCLALRLRGDMYIFVKN 244
Score = 269 bits (659), Expect = 1e-72
Identities = 133/157 (84%), Positives = 145/157 (92%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXIFL 570
FAGKQL DGRTL+DYNIQKESTLHLV RL GGM IF+
Sbjct: 123 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFV 159
Score = 254 bits (622), Expect = 3e-68
Identities = 135/193 (69%), Positives = 151/193 (78%), Gaps = 2/193 (1%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGK LE GRTL+ YNIQK STL+LV R R GMQIFVKTLT K I LEVE+ DTIENVK
Sbjct: 286 IFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLEVESWDTIENVK 345
Query: 181 AKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLT 354
A +QDKEGI P QRLIF GK+L+DG TL+DY+IQKESTLHLVL GMQIFVK
Sbjct: 346 AMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHLVL----GMQIFVKLFG 401
Query: 355 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHL 534
GK ITLEV +SDTI++VKAKIQDK G PPDQQ L+F G QL DGRTL DYNI+ ESTLHL
Sbjct: 402 GKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHL 461
Query: 535 VXRLXGGMXIFLE 573
+ GM IF++
Sbjct: 462 FFHIRHGMQIFVK 474
Score = 247 bits (605), Expect = 4e-66
Identities = 129/189 (68%), Positives = 145/189 (76%), Gaps = 7/189 (3%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-------TGKTITLEVEAS 159
+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT T KTITLEVE+S
Sbjct: 436 LFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESS 495
Query: 160 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 339
DTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGGMQIF
Sbjct: 496 DTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIF 555
Query: 340 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKE 519
+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QL DG TL DY+I K+
Sbjct: 556 IKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKK 615
Query: 520 STLHLVXRL 546
STL+LV RL
Sbjct: 616 STLYLVLRL 624
Score = 246 bits (601), Expect = 1e-65
Identities = 131/198 (66%), Positives = 150/198 (75%), Gaps = 7/198 (3%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IF GK+L+DG TL+DY+IQKESTLHLVL GMQIFVK GK ITLEV +SDTI++VK
Sbjct: 364 IFLGKELKDGCTLADYSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDTIKSVK 419
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL--- 351
AKIQDK G PPDQQ L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT
Sbjct: 420 AKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFS 479
Query: 352 ----TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKE 519
T KTITLEVE+SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK
Sbjct: 480 GETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKG 539
Query: 520 STLHLVXRLXGGMXIFLE 573
ST+H + GGM IF++
Sbjct: 540 STIHQLFLQRGGMQIFIK 557
Score = 237 bits (580), Expect = 4e-63
Identities = 133/200 (66%), Positives = 151/200 (75%), Gaps = 9/200 (4%)
Frame = +1
Query: 1 IFAGKQL--EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVEAS 159
IF G++L ED RTL+DY I+ STL L LRLRG M IFVK L TG+ LEVE+S
Sbjct: 203 IFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESS 262
Query: 160 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 339
DTI+NVKAK+QDKE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GMQIF
Sbjct: 263 DTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIF 322
Query: 340 VKTLTGKTITLEVEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLXDGRTLSDYNIQ 513
VKTLT K I LEVE+ DTIENVKA +QDKEGI P+ QRLIF GK+L DG TL+DY+IQ
Sbjct: 323 VKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQ 382
Query: 514 KESTLHLVXRLXGGMXIFLE 573
KESTLHLV GM IF++
Sbjct: 383 KESTLHLVL----GMQIFVK 398
Score = 153 bits (371), Expect = 9e-38
Identities = 77/107 (71%), Positives = 86/107 (80%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IF G+ L RTL DYNIQK ST+H + RGGMQIF+KTLTGKTI LEVE+SDTI NVK
Sbjct: 519 IFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVK 578
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 321
KIQ KEGI PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 579 EKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
Score = 132 bits (318), Expect = 2e-31
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQL DG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 508 IQKESTLHLVXRLXGGMXIFLE 573
IQKESTLHLV RL GGM IF++
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQ 84
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 245 bits (600), Expect = 2e-65
Identities = 117/155 (75%), Positives = 134/155 (86%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGMXI 564
+AGKQL D +T DYNI+ S LHLV L GG +
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGFGL 155
Score = 166 bits (404), Expect = 9e-42
Identities = 78/109 (71%), Positives = 92/109 (84%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 327
++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 104 ERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 242 bits (593), Expect = 1e-64
Identities = 116/153 (75%), Positives = 133/153 (86%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 459
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 460 FAGKQLXDGRTLSDYNIQKESTLHLVXRLXGGM 558
+AGKQL D +T DY I+ S LHLV L GG+
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
Score = 164 bits (398), Expect = 5e-41
Identities = 77/110 (70%), Positives = 92/110 (83%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIK 103
Query: 181 AKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 330
++++KEGIPP QQRLI+AGKQL D +T DY I+ S LHLVL LRGG+
Sbjct: 104 ERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
Score = 146 bits (354), Expect = 1e-35
Identities = 71/79 (89%), Positives = 74/79 (93%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGMXI 564
IQKESTLHLV RL GG I
Sbjct: 61 IQKESTLHLVLRLRGGTMI 79
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 153 bits (372), Expect = 6e-38
Identities = 80/106 (75%), Positives = 86/106 (81%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 417
IQKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 147 bits (356), Expect = 6e-36
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGMXIFLENTYPVKP 594
IQKESTLHLV RL GG + TY KP
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTY-TKP 88
Score = 70.9 bits (166), Expect = 6e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVK 180
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG K KT T + T + VK
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVK 99
Query: 181 AKI 189
+
Sbjct: 100 LAV 102
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 153 bits (370), Expect = 1e-37
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGM 330
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 146 bits (353), Expect = 1e-35
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGM 558
IQKESTLHLV RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 102
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 153 bits (370), Expect = 1e-37
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGGM 330
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 146 bits (353), Expect = 1e-35
Identities = 70/77 (90%), Positives = 74/77 (96%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGM 558
IQKESTLHLV RL GG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 102
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG+
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGI 77
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGG 327
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 147 bits (356), Expect = 6e-36
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGMXIFLENTYPVKP 594
IQKESTLHLV RL GG + TY KP
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTY-TKP 88
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 99
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 1e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 280 IQKESTLHLVLRLRGG 327
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 147 bits (356), Expect = 6e-36
Identities = 74/89 (83%), Positives = 78/89 (87%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 508 IQKESTLHLVXRLXGGMXIFLENTYPVKP 594
IQKESTLHLV RL GG + TY KP
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTY-TKP 88
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/33 (96%), Positives = 33/33 (100%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 99
IFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 44 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 128 bits (308), Expect = 4e-30
Identities = 83/192 (43%), Positives = 109/192 (56%), Gaps = 21/192 (10%)
Frame = +1
Query: 16 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 177
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 178 KAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 318
KAK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Query: 319 RGG--MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRT 492
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L + T
Sbjct: 136 GPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNAT 195
Query: 493 LSDYNIQKESTL 528
+SDYNI+ ++ L
Sbjct: 196 ISDYNIKPDANL 207
Score = 31.9 bits (69), Expect = 0.33
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVE-ASDTI------ENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 258
M I +KTL GK I LEVE +S+TI E + + D P ++ K L G
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTL-TG 59
Query: 259 RTLSDYNIQKESTLHLV--------------LRLRGGMQIFVKTLTGKTITLEV-EASDT 393
RT + Y ++ T+ + RL +I +KT+ GK+I LEV ++SDT
Sbjct: 60 RT-NTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDT 118
Query: 394 IE 399
I+
Sbjct: 119 ID 120
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 119 bits (286), Expect = 2e-27
Identities = 73/158 (46%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Frame = +1
Query: 121 LTGKT-ITLEVEASDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 288
+ GKT I LEV++S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 289 ESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 432
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+G
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG 120
Query: 433 IPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHLVXRL 546
IP DQQRLIF GKQL DG TL+DYNIQ +S LHL+ RL
Sbjct: 121 IPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 116 bits (278), Expect = 2e-26
Identities = 55/73 (75%), Positives = 62/73 (84%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 280 IQKESTLHLVLRL 318
IQ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRL 90
IF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 129 IFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 280 IQKESTLHLVLRLRGG 327
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 91.1 bits (216), Expect = 5e-19
Identities = 41/76 (53%), Positives = 55/76 (72%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 508 IQKESTLHLVXRLXGG 555
+++ S LHLV L GG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 99
++ GKQL D T YN+++ S LHLVL LRGG
Sbjct: 44 VYTGKQLADDLTAKHYNLERGSVLHLVLALRGG 76
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 92.7 bits (220), Expect = 2e-19
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 118 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 294
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 295 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 468
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 469 KQLXDGRTLSDYNIQKESTLHLVXR 543
++L D ++D +S LHL+ R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 68.5 bits (160), Expect = 3e-12
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 IFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 177
+F G++L + DY + + + LHLVL+L + VKT GK VE I V
Sbjct: 77 VFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYV 136
Query: 178 KAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 315
K +I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 137 KKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 346 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRT-LSDYNIQKES 522
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 523 TLHLVXRL 546
LHLV +L
Sbjct: 100 ILHLVLKL 107
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 92.7 bits (220), Expect = 2e-19
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 118 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 294
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 295 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 468
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 469 KQLXDGRTLSDYNIQKESTLHLVXR 543
++L D ++D +S LHL+ R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 68.5 bits (160), Expect = 3e-12
Identities = 37/108 (34%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +1
Query: 1 IFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 177
+F G++L + DY + + + LHLVL+L + VKT GK VE I V
Sbjct: 77 VFGGRELARSNSNMRDYGVSEGNILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYV 136
Query: 178 KAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR 315
K +I K G + PD+Q +++ G++LED ++D +S LHL++R
Sbjct: 137 KKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVR 184
Score = 52.0 bits (119), Expect = 3e-07
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 346 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRT-LSDYNIQKES 522
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 523 TLHLVXRL 546
LHLV +L
Sbjct: 100 ILHLVLKL 107
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 78.6 bits (185), Expect = 3e-15
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 4/144 (2%)
Frame = +1
Query: 118 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 294
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 295 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFA 465
LHLV+RL I V+T+ GK L VE S + VK +I KE GIP D + L
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLD 156
Query: 466 GKQLXDGRTLSDYNIQKESTLHLV 537
G++L D R ++D ++ +HL+
Sbjct: 157 GEELDDQRLITDLCQNGDNVIHLL 180
Score = 57.6 bits (133), Expect = 6e-09
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Frame = +1
Query: 13 KQLEDGRTLS-------DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIE 171
K L DGR +S DY + LHLV+RL I V+T+ GK L VE S +
Sbjct: 73 KLLYDGREVSRNDSQIRDYGLADGKLLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVG 132
Query: 172 NVKAKIQDKE---GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL 312
VK +I KE GIP D + L G++L+D R ++D ++ +HL++
Sbjct: 133 YVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDLCQNGDNVIHLLI 181
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 75.8 bits (178), Expect = 2e-14
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Frame = +1
Query: 118 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 294
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 295 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAG 468
LHLVL+L + + V T GK V+ + +K +I ++ +G P D Q ++F G
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKG 159
Query: 469 KQLXDGRTLSDYNIQKESTLHLVXR 543
++L D R + S +HL+ +
Sbjct: 160 EKLDDNRIIDGICKDGNSVIHLLVK 184
Score = 57.6 bits (133), Expect = 6e-09
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Frame = +1
Query: 1 IFAGKQL-EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 177
+F+G++L + + DY + S LHLVL+L + + V T GK V+ + +
Sbjct: 77 VFSGRELARNASRVKDYGVTGGSVLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYL 136
Query: 178 KAKI-QDKEGIPP-DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR--LRGGMQIFVK 345
K +I ++ +G P D Q ++F G++L+D R + S +HL+++ + ++
Sbjct: 137 KKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGICKDGNSVIHLLVKKSVEDTVKREED 196
Query: 346 TLTGKTITLE 375
T TGK LE
Sbjct: 197 TATGKDSLLE 206
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 346 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLX-DGRTLSDYNIQKES 522
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 523 TLHLVXRLXGGMXIFLENT 579
LHLV +L + + + T
Sbjct: 100 VLHLVLKLYDPLLVTVITT 118
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 280 IQKESTLHLVLR 315
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 508 IQKESTLHLVXR 543
++ TLHL+ R
Sbjct: 84 LENGHTLHLIVR 95
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLR 87
IF G+ L+D LS+Y+++ TLHL++R
Sbjct: 67 IFRGRVLKDDHPLSEYHLENGHTLHLIVR 95
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 66.9 bits (156), Expect = 1e-11
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Frame = +1
Query: 148 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 327
V ++++E +K + D + + Q+ + + + E+ R+LS S RL
Sbjct: 39 VGVAESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL--- 95
Query: 328 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDY 504
QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL +L+ Y
Sbjct: 96 -QIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 505 NIQKESTLHLVXRL 546
+I+++++L LV R+
Sbjct: 155 SIEQDASLQLVARM 168
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +1
Query: 100 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 276
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 277 NIQKESTLHLVLRLR 321
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/31 (38%), Positives = 24/31 (77%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 93
I+ GKQL+ +L+ Y+I+++++L LV R++
Sbjct: 139 IYKGKQLQRENSLTYYSIEQDASLQLVARMQ 169
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 54.8 bits (126), Expect = 4e-08
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 276
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 277 NIQKESTLHLVLRLRGGMQIFVKTLTG 357
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDY 504
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 505 NIQKESTLHLVXRLXGG 555
Q ++T++LV L GG
Sbjct: 67 --QPDATVNLVLSLRGG 81
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 1 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 129
I G Q+ DG +S Q ++T++LVL LRGG F L G
Sbjct: 53 ISGGYQISDGSAIS----QPDATVNLVLSLRGGKGGFGSLLRG 91
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 273
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 274 YNIQKESTLHLVL 312
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 50.8 bits (116), Expect = 7e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLXDGRTLSD 501
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 502 YNIQKES 522
N+ + S
Sbjct: 61 NNVVENS 67
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 5e-07
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +1
Query: 112 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 291
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 292 STLHLV 309
T+H+V
Sbjct: 82 HTIHMV 87
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = +1
Query: 340 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKE 519
++ G +++ T+E+ K + +P +QQRLI+ G+ L D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 520 STLHLV 537
T+H+V
Sbjct: 82 HTIHMV 87
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 7e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 270
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 271 DYNIQKESTLHLVLRLRGG 327
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLXDGRTLS 498
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 499 DYNIQKESTLHLVXRLXGG 555
DY I+ H+ R+ GG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 7e-07
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 280 IQKESTLHL 306
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 7e-07
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +1
Query: 112 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 291
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 292 STLHLV 309
T+H+V
Sbjct: 82 HTVHMV 87
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 340 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKE 519
V+ G ++ T+E+ K I +P +QQRLI+ G+ L D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 520 STLHLV 537
T+H+V
Sbjct: 82 HTVHMV 87
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 82 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDG 258
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 259 RTLSDYNIQKESTLHLV 309
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 310 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLXDG 486
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 487 RTLSDYNIQKESTLHLV 537
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 4 FAGKQLEDGRTLSDYNIQKESTLHLV 81
+ GK+L+D ++L+ N+Q S +HL+
Sbjct: 706 YKGKELDDEKSLAAQNVQPNSLVHLI 731
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 280 IQKESTLHLVL 312
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/70 (31%), Positives = 44/70 (62%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 508 IQKESTLHLV 537
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 16 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 180
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 181 AKIQDKEGIPP 213
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 244 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 408
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 409 AKIQDKEGIPP 441
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVE-ASDTIE 399
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 276
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 277 NIQKESTLHLV 309
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
Score = 47.6 bits (108), Expect = 6e-06
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLXDGRTLSDY 504
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L + + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 505 NIQKESTLHLV 537
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 276
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 277 NIQKESTLHLVLRLRGG 327
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 44.0 bits (99), Expect = 8e-05
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDY 504
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 505 NIQKESTLHLVXRLXGG 555
Q ++T++LV L GG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 5e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 280 IQKESTL 300
I ES L
Sbjct: 61 ILFESLL 67
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 280 IQKESTLHL 306
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.2 bits (107), Expect = 8e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 270
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 271 DYNIQKESTLHLVL 312
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLXDGRTLS 498
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 499 DYNIQKES 522
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.2 bits (107), Expect = 8e-06
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 270
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 271 DYNIQKESTLHLVL 312
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLXDGRTLS 498
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 499 DYNIQKES 522
+ + + S
Sbjct: 61 ENKVAENS 68
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 270
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 271 DYNIQKESTLHLVL 312
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLXDGRTLS 498
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 499 DYNIQKESTL 528
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 270
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 271 DYNIQKESTLHLVL 312
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLXDGRTLS 498
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 499 DYNIQKESTL 528
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 270
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 271 DYNIQKESTLHLVL 312
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLXDGRTLS 498
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 499 DYNIQKESTL 528
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 270
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 271 DYNIQKESTLHLVL 312
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 44.0 bits (99), Expect = 8e-05
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLXDGRTLS 498
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 499 DYNIQKESTL 528
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.8 bits (101), Expect = 4e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 280 IQKESTLHLVL----RLRGGMQIF 339
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 508 IQKESTLHL 534
I S + L
Sbjct: 61 ILNHSRIQL 69
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 276
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 277 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 372
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLXDGRTLSDY 504
M+I + L GK L V +++ ++KAK K + ++ + GK+L D ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 505 NIQKESTLHLV 537
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
Score = 32.3 bits (70), Expect = 0.25
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +1
Query: 4 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 144
+ GK+LED ++L++ N+Q S +HL LR + + + + L G+ +L
Sbjct: 545 YMGKELEDEKSLAEQNVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 280 IQKESTLHL 306
I+ S + L
Sbjct: 62 IRHNSRILL 70
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 508 IQKESTLHL 534
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 279
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 280 IQKESTLHL 306
I+ S + L
Sbjct: 96 IRHNSRILL 104
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYN 507
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 508 IQKESTLHL 534
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +1
Query: 127 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 306
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 307 VLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 417
+ L G +K + + I+ V SD ++ K +
Sbjct: 604 MASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1
Query: 355 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHL 534
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 535 V 537
+
Sbjct: 604 M 604
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 255
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 37.5 bits (83), Expect = 0.007
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXD 483
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 240
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 468
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 100 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 240
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 328 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 468
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.009
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +1
Query: 127 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 303
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 304 LVLRLRGG 327
L LR RGG
Sbjct: 775 LSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 142 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 255
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 33.9 bits (74), Expect = 0.083
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 370 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXD 483
L +EA+ T +K + G+ P QQRL+F GK+ D
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 36.3 bits (80), Expect = 0.015
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 94 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 264
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 322 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDGRT 492
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L + T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.063
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 112 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 255
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 31.9 bits (69), Expect = 0.33
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 340 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXD 483
V T++ + + ++A+ T +K I GI +QRL+F GK+ D
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.5 bits (73), Expect = 0.11
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +1
Query: 142 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 306
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 307 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 411
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Frame = +1
Query: 370 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLXDG----RTLSDYNIQKESTL 528
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L D TLS I++ S +
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 25 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 201
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 253 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 429
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +1
Query: 157 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 297
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 298 LHLVLRL 318
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 151 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 306
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 379 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLXDGRTLSDYNIQKESTLHL 534
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 28.3 bits (60), Expect = 4.1
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +1
Query: 106 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 255
+F+ GKT++++V S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 256 GRTLSDYNIQKESTLHLVLRLRGGMQ 333
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = -3
Query: 499 QIVYDHLQAVCPQRSIAADLGEFPLYPESWLSHSQWC 389
+I H +CP+R + + EFPL H + C
Sbjct: 73 EIFDSHKGEICPKRIVTCEFCEFPLPAVDLAEHQEVC 109
>At5g47250.1 68418.m05826 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 843
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = +1
Query: 226 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENV 405
L+ AG LE + + +++ ++ L +V R G + VKT G + +V T+ +
Sbjct: 455 LVGAGLLLESNKKVYMHDMIRDMALWIVSEFRDGERYVVKTDAGLSQLPDVTDWTTVTKM 514
Query: 406 KAKIQDKEGIPPDQQ 450
+ + IP D +
Sbjct: 515 SLFNNEIKNIPDDPE 529
>At2g46950.1 68415.m05864 cytochrome P450 family protein similar to
cytochrome P450 72A1 (SP:Q05047) [Catharanthus roseus];
contains Pfam profile: PF00067: Cytochrome P450
Length = 572
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = -1
Query: 324 TTQSQNQMQSRFFLDVVVR*CTTIFKLFARKNQSLLIWGNSLFVLN 187
T S N+ + + +D ++ C T F +LL W L L+
Sbjct: 353 TAASSNESEKKMSIDEIIEECKTFFFAGHETTANLLTWSTMLLSLH 398
>At1g77680.1 68414.m09044 ribonuclease II family protein weak
similarity to SP|P37202 Mitotic control protein dis3
{Schizosaccharomyces pombe}; contains Pfam profile
PF00773: RNB-like protein
Length = 1055
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -3
Query: 292 ILSGCCSQIMYDHLQAVCPQKSIAADLGEFPLCPESWLSHFRWCQM 155
I+ CC ++ YDH Q + KS A+ G +P S F+WC +
Sbjct: 590 IIRSCC-KLSYDHAQDIIDGKSDVAENG-WPALHGS----FKWCDV 629
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 121 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 258
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 349 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLXDG 486
+TG T E DTI K ++ G P + ++F+G DG
Sbjct: 323 VTGMRTTKEARIGDTIYRTKTTVEPLPGFKP-VRHMVFSGVYPADG 367
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.137 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,504,189
Number of Sequences: 28952
Number of extensions: 275181
Number of successful extensions: 995
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1187288784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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