Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1028
(700 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 316 8e-87
03_01_0547 + 4093196-4093657,4094267-4095148 316 8e-87
03_01_0544 + 4082528-4082989,4083585-4084466 316 8e-87
03_01_0543 + 4076981-4077442,4078145-4079026 316 8e-87
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 138 4e-33
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 136 2e-32
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 130 1e-30
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 120 8e-28
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 120 8e-28
02_04_0462 + 23131433-23132836 85 4e-17
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 76 3e-14
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 31 0.88
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 30 1.5
09_02_0384 - 8294914-8297817 29 3.5
01_01_0019 + 141084-141631,142191-142431,142563-142680,142749-14... 29 3.5
04_04_0815 - 28269918-28270022,28270164-28270226,28270342-282704... 29 4.7
03_02_0835 + 11636213-11636342,11636734-11637185 29 4.7
07_03_1409 + 26359581-26360561 28 6.2
03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071 28 6.2
09_04_0749 + 19919367-19920869 28 8.2
09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465 28 8.2
09_02_0058 - 3704138-3704257,3704355-3704421,3704502-3704641,370... 28 8.2
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 28 8.2
05_07_0153 - 28051496-28051801,28051933-28052271 28 8.2
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 28 8.2
01_01_0963 - 7577207-7577992,7578506-7578622,7578711-7578921,757... 28 8.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 316 bits (777), Expect = 8e-87
Identities = 153/218 (70%), Positives = 177/218 (81%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
K+GYNP + FVPISG+ GDNM+E S + W+KG T L+EALD I P
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT------------LLEALDQINEPK 227
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RP++KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P+ +TTEVKSVEMHHEAL
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
QEA+PGDNVGFNVKNV+VK+L+RGYVA +S + P K A
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEA 325
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 316 bits (777), Expect = 8e-87
Identities = 153/218 (70%), Positives = 177/218 (81%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
K+GYNP + FVPISG+ GDNM+E S + W+KG T L+EALD I P
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT------------LLEALDQINEPK 227
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RP++KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P+ +TTEVKSVEMHHEAL
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
QEA+PGDNVGFNVKNV+VK+L+RGYVA +S + P K A
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEA 325
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 316 bits (777), Expect = 8e-87
Identities = 153/218 (70%), Positives = 177/218 (81%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
K+GYNP + FVPISG+ GDNM+E S + W+KG T L+EALD I P
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT------------LLEALDQINEPK 227
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RP++KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P+ +TTEVKSVEMHHEAL
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
QEA+PGDNVGFNVKNV+VK+L+RGYVA +S + P K A
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEA 325
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 316 bits (777), Expect = 8e-87
Identities = 153/218 (70%), Positives = 177/218 (81%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P Y +ARY+EI KEVSSY+K
Sbjct: 120 TGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLK 179
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
K+GYNP + FVPISG+ GDNM+E S + W+KG T L+EALD I P
Sbjct: 180 KVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPT------------LLEALDQINEPK 227
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RP++KPLRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV F P+ +TTEVKSVEMHHEAL
Sbjct: 228 RPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEAL 287
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
QEA+PGDNVGFNVKNV+VK+L+RGYVA +S + P K A
Sbjct: 288 QEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEA 325
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 138 bits (334), Expect = 4e-33
Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 1/212 (0%)
Frame = +2
Query: 14 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 193
GEFE G + GQTREH LLA TLGV +L+V +NKMD + + + RY+EI+ ++ ++K
Sbjct: 67 GEFETGYERGGQTREHVLLAKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKS 126
Query: 194 IGYN-PATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
GYN V F+PISG G NM DK W+ G CL E LD IQ P
Sbjct: 127 SGYNVKKDVHFLPISGLLGTNMKTRMDKSN-CSWWS---------GPCLFEVLDCIQVPL 176
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
R + P+R+P+ D YK +GTV +G++E+G + G ++ P +V SV + +
Sbjct: 177 RDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEGDNMLVMPNKANVKVISVHCDEDRV 234
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXN 646
+ A PG+NV + + ++ G+V N
Sbjct: 235 RSAAPGENVRVKLSGIEEDDITAGFVLSSIKN 266
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 136 bits (329), Expect = 2e-32
Identities = 79/218 (36%), Positives = 118/218 (54%), Gaps = 1/218 (0%)
Frame = +2
Query: 14 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 193
GEFE G K GQTREH LLA TLGV +LIV +NKMD + + RY+EI+ ++ +++
Sbjct: 112 GEFETGYEKGGQTREHVLLAKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRS 171
Query: 194 IGYN-PATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
GYN V F+PISG G NM DK W +G CL E LD I+ P
Sbjct: 172 SGYNVKKDVHFLPISGLLGSNMKTRMDKS--ICSWW--------DGPCLFEVLDCIEVPL 221
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
R + P+R+P+ D YK +GTV +G++E+G ++ G ++ P +V + + +
Sbjct: 222 RDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREGDSLLVMPNKTNVKVIGISLDEHKV 279
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
+ A P +NV + + +++ G+V N P GA
Sbjct: 280 RRAGPAENVRVKLSGIEDEDIMAGFVLSSIGN--PVGA 315
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 130 bits (313), Expect = 1e-30
Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 3/208 (1%)
Frame = +2
Query: 14 GEFEAGISKNG--QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYI 187
G FEAG+ NG QT+EH+ L + GV LIV VNKMDS E Y + R+ IK ++ +++
Sbjct: 348 GSFEAGMGINGIGQTKEHSQLVRSFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFL 405
Query: 188 KKIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPP 367
+ GY + VA+VPIS +N++ + W +G CL++A+D + PP
Sbjct: 406 RSCGYKDSAVAWVPISAMENENLMTTASDTR-LSSW--------YDGNCLLKAIDTLPPP 456
Query: 368 SRPTEKPLRLPLQDVYKIGGIGTVPV-GRVETGILKPGMVVVFAPAAITTEVKSVEMHHE 544
SR KPLRLP+ DV+ +G V + G+VE G + G ++ P VK++E +
Sbjct: 457 SRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGSKILVMPFGELAVVKTIERNSS 516
Query: 545 ALQEAMPGDNVGFNVKNVSVKELRRGYV 628
+ A GDNV ++ + + G V
Sbjct: 517 SCNLARAGDNVAIGLQGIDPSHIMPGGV 544
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 120 bits (290), Expect = 8e-28
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Frame = +2
Query: 11 TGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEV 175
TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ Y + R+E IK ++
Sbjct: 360 TGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQL 417
Query: 176 SSYIKKIGYNPATVAFVPISGWHGDNMLE-PSDKMPWFKGWTIDRKDGKVEGKCLIEALD 352
S+++ + ++V ++P+S N+++ PSD W +G CL++A+D
Sbjct: 418 GSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR--LTSW--------YQGFCLLDAID 467
Query: 353 AIQPPSRPTEKPLRLPLQDVYKIGGIGT-VPVGRVETGILKPGMVVVFAPAAITTEVKSV 529
++Q PSR KPL LP+ DV K G G++ETG ++ G V+ +P VKS+
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSI 527
Query: 530 EMHHEALQEAMPGDNVGFNVKNVSVKELRRG 622
E + A GDNV +++ + +L G
Sbjct: 528 ERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 120 bits (290), Expect = 8e-28
Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 7/211 (3%)
Frame = +2
Query: 11 TGEFEAGISKNG-----QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEV 175
TG FEAG+ G QT+EHA L + GV+QLIV VNKMD+ Y + R+E IK ++
Sbjct: 360 TGSFEAGMDGEGGKSVGQTKEHAQLIRSFGVEQLIVAVNKMDAIG--YSKERFEFIKVQL 417
Query: 176 SSYIKKIGYNPATVAFVPISGWHGDNMLE-PSDKMPWFKGWTIDRKDGKVEGKCLIEALD 352
S+++ + ++V ++P+S N+++ PSD W +G CL++A+D
Sbjct: 418 GSFLRSCNFKDSSVTWIPLSAVENQNLIKIPSDVR--LTSW--------YQGFCLLDAID 467
Query: 353 AIQPPSRPTEKPLRLPLQDVYKIGGIGT-VPVGRVETGILKPGMVVVFAPAAITTEVKSV 529
++Q PSR KPL LP+ DV K G G++ETG ++ G V+ +P VKS+
Sbjct: 468 SLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKVLISPCGEVAAVKSI 527
Query: 530 EMHHEALQEAMPGDNVGFNVKNVSVKELRRG 622
E + A GDNV +++ + +L G
Sbjct: 528 ERDSNSCDIARAGDNVAVSLQGIDGSKLILG 558
>02_04_0462 + 23131433-23132836
Length = 467
Score = 85.4 bits (202), Expect = 4e-17
Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 3/210 (1%)
Frame = +2
Query: 47 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFV 226
QT+EH LLA +GV +++V +NK D + E + ++ EV + Y+ V
Sbjct: 173 QTKEHILLAKQVGVPKIVVFLNKKDQVDD---EELLQLVELEVRELLSSYEYDGDEV--- 226
Query: 227 PISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQP-PSRPTEKPLRLPL 403
PI LE P K + DG LI+++D P P R T+ P L +
Sbjct: 227 PIVAGSALKALENLMANPAIKRGDDEWVDGIFS---LIDSVDNYIPVPQRQTDLPFLLAV 283
Query: 404 QDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTE--VKSVEMHHEALQEAMPGDNV 577
+DV+ I G GTV GR+E G +K G V T V VEM + + +AM GDNV
Sbjct: 284 EDVFSITGRGTVATGRIERGTVKVGDTVDIVGIRETRNCTVTGVEMFQKTMDDAMAGDNV 343
Query: 578 GFNVKNVSVKELRRGYVAGDSXNAPPKGAF 667
G ++ + ++ RG V + P F
Sbjct: 344 GLLLRGMQKDDIERGMVLAKPASITPHTKF 373
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 75.8 bits (178), Expect = 3e-14
Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Frame = +2
Query: 47 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATVAFV 226
QT+EH LLA +GV L+ +NK+D+ + P E +E+ S+ K G +
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGS 229
Query: 227 PISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQP-PSRPTEKPLRLPL 403
+S G N D++ GK L++A+D P P R +K +P+
Sbjct: 230 ALSALQGTN-----DEI------------GKNAILKLMDAVDEYIPDPVRQLDKSFLMPI 272
Query: 404 QDVYKIGGIGTVPVGRVETGILKPG---MVVVFAPAA-ITTEVKSVEMHHEALQEAMPGD 571
+DV+ I G GTV GRVE G +K G ++ P+ + T V VEM + L GD
Sbjct: 273 EDVFSIQGRGTVVTGRVEQGTIKTGEDVEILGLTPSGPLKTTVTGVEMFKKILDHGEAGD 332
Query: 572 NVGFNVKNVSVKELRRGYV 628
NVG ++ + +++RG V
Sbjct: 333 NVGLLLRGLKRGDVQRGQV 351
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 31.1 bits (67), Expect = 0.88
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +2
Query: 116 MDSTEPPYHEARYEEIKKEVSSYIKKIGYNPATV------AFVPISGWHGDNMLEPSDK 274
M STEP + Y + EV IKK+GYN + A+ G+H N PS +
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPSSR 378
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 297 VHPLNQGILSEGSSILSPCQPDIGTNATVAG 205
VHP +L G + L+ C P + ATVAG
Sbjct: 257 VHPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>09_02_0384 - 8294914-8297817
Length = 967
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 449 VQLAPFRFLLSCTRPEEASEGASQSAVTEAVSHRAPR*DIFPRLCRPC 306
V A R L C +P+EA E SA E + P ++ R+C C
Sbjct: 290 VMEADKRIKLECLQPDEAWELFKYSATEETICADMPIENVAKRVCAKC 337
>01_01_0019 +
141084-141631,142191-142431,142563-142680,142749-142789,
143114-143146,145028-145082,145179-145339,145450-145719,
146106-146184,146311-146375,146507-146575
Length = 559
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 459 VSTRPTGTVPIPPILYTS*RGKRRGFSVGRDGGCIASSASMRHFPSTLPSLRSMVH 292
V+ +P T+P+PP+++ R G V DG C+ ++A R S P R + H
Sbjct: 63 VAWKPPATLPLPPLVF---RLDHAG-EVDADGNCLFTAA--RKAASAKPDARDLRH 112
>04_04_0815 -
28269918-28270022,28270164-28270226,28270342-28270460,
28270586-28270684,28270761-28270953,28271024-28271117,
28271339-28271394,28272372-28272431,28272877-28272989,
28273286-28273343,28273429-28273521,28273659-28273904,
28274990-28275371,28275523-28275595,28275692-28275795,
28275872-28275963,28275996-28276106,28276225-28276309,
28276385-28276518,28278264-28278302
Length = 772
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = -1
Query: 595 VLDVEADVIAGHRLLQCLVVHLNRLNFGGNSCRSKYHNHTRLENSCLHSSNWHRSDSSYL 416
V+ +E I + L+C V + F C++ + H N+ N R +SSY+
Sbjct: 513 VVSIEDASILYQKQLECRV-NGEETFFFSTLCQNDIYRHVDSINTIYRKDNSPREESSYV 571
Query: 415 VHVLKRQAKGL 383
V + + KG+
Sbjct: 572 VKSPREKKKGI 582
>03_02_0835 + 11636213-11636342,11636734-11637185
Length = 193
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 307 QGRQSRGKMSHRGARCDTASVTAD*EAPSLASSGRVQDRRNRNGASWTSGD 459
+G + ++ H G R D VT D R +RR RNG+S S D
Sbjct: 10 EGGGTTVELIHSGERLDGLGVTVDRGLRGNECRERHSERRKRNGSSARSND 60
>07_03_1409 + 26359581-26360561
Length = 326
Score = 28.3 bits (60), Expect = 6.2
Identities = 23/69 (33%), Positives = 34/69 (49%)
Frame = -2
Query: 492 NTTTIPGLRIPVSTRPTGTVPIPPILYTS*RGKRRGFSVGRDGGCIASSASMRHFPSTLP 313
+ T + +PV+T P G V P TS R +RR R GG A++A P+ P
Sbjct: 143 DATQVTPAPVPVNTSPNGEVKSP----TSGRQRRR-----RRGGDFAATA-----PAAAP 188
Query: 312 SLRSMVHPL 286
+ +MV P+
Sbjct: 189 ATTNMVQPI 197
>03_05_0637 - 26312348-26313004,26313507-26313575,26313799-26314071
Length = 332
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = -2
Query: 573 LSPGIASCSASWCISTDLTSVVIAAGANTTTIPGLRIPVS 454
L+ G+AS AS ++ +S+ +AAGA T +P L +P S
Sbjct: 142 LADGVASLVASGSPNSGASSLDLAAGATTAAVP-LPLPSS 180
>09_04_0749 + 19919367-19920869
Length = 500
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 437 VPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQEAMPGDNVGF-NVKNVSV 604
VPVG + + PG+ V + T + + + HH +++ + VG NV +V V
Sbjct: 161 VPVGEADGPLRLPGLPVELDAGDVPTFLAAHDTHHPSMRALLMNQFVGLDNVDHVFV 217
>09_02_0391 + 8482996-8483216,8484146-8484194,8484559-8487465
Length = 1058
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 271 IRRLQHIVTVPARYRYERHSSGIVTNFLNVRR 176
I LQ I ++P+ E H+SG + LN+RR
Sbjct: 870 IDTLQEIASLPSLKELEVHNSGRLQTVLNIRR 901
>09_02_0058 -
3704138-3704257,3704355-3704421,3704502-3704641,
3705332-3705424,3705927-3706109,3706491-3706595,
3706738-3706818,3706905-3707046,3707207-3707286,
3707456-3707568,3708051-3708297,3708659-3709051
Length = 587
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 318 LPSLRSMVHPLNQGILSEGSSILSPCQPDIGTNATVAGL*PIFL 187
LP ++ + +Q + S +S++ P +G AT+ L PIFL
Sbjct: 321 LPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLLPIFL 364
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -1
Query: 361 LYRIERLDETFSLDFAVLAIDGPPLEPRHLIRRLQHIVTVPARYRYE 221
L RI L+E + D VLA+ G E +H R+Q ++ RY YE
Sbjct: 232 LNRIWSLEEQHAAD--VLAMKGLKSELQHAHARVQELLQERRRYHYE 276
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 419 SCTRPEEASEGASQSAVTEAVSHRAPR*DIFPRLCRPCDRWSTP 288
S RP G A + AP PR C CD STP
Sbjct: 60 SSARPGGGGGGKQDGAGVAPCNKEAPAAGRLPRRCANCDTMSTP 103
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 86 VKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSY---IKKIGYNPATVAFVPISGWHGDNM 256
+K +++G NK+D E Y++ + +SSY KK+ Y A + S W+ D+
Sbjct: 272 IKHILLGRNKVDLGPWILQEINYQKEEGSLSSYEWFRKKLEYELNEEATLEKSEWNSDDD 331
Query: 257 LEPSDK 274
P ++
Sbjct: 332 NAPCNE 337
>01_01_0963 -
7577207-7577992,7578506-7578622,7578711-7578921,
7579406-7579442,7580781-7580902,7581292-7581500
Length = 493
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 541 VVHLNRLNFGGNSCRSKYHNHTRLENSCLHSSNWHR 434
V+ +RL GG S S N+ R+ S NW+R
Sbjct: 417 VIRSSRLYSGGTSGTSFSFNYVRMNKSLFEFHNWNR 452
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,743,348
Number of Sequences: 37544
Number of extensions: 447620
Number of successful extensions: 1590
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1567
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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