Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1028
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 427 e-122
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 416 e-118
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 409 e-116
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 249 2e-68
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 95 6e-22
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 24 1.6
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 24 1.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.9
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 8.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 427 bits (1051), Expect = e-122
Identities = 198/218 (90%), Positives = 207/218 (94%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 120 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 179
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 180 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 239
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RPT+K LRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV FAPA +TTEVKSVEMHHEAL
Sbjct: 240 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 299
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
QEA+PGDNVGFNVKNVSVKELRRGYVAGDS N PPKGA
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGA 337
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +3
Query: 654 PKALSDFTAQXIVLN 698
PK +DFTAQ IVLN
Sbjct: 334 PKGAADFTAQVIVLN 348
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 416 bits (1024), Expect = e-118
Identities = 193/212 (91%), Positives = 202/212 (95%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 63 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 122
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 123 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 182
Query: 371 RPTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
RPT+K LRLPLQDVYKIGGIGTVPVGRVETG+LKPGMVV FAPA +TTEVKSVEMHHEAL
Sbjct: 183 RPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEAL 242
Query: 551 QEAMPGDNVGFNVKNVSVKELRRGYVAGDSXN 646
QEA+PGDNVGFNVKNVSVKELRRGYVAGDS N
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 409 bits (1007), Expect = e-116
Identities = 189/217 (87%), Positives = 202/217 (93%)
Frame = +2
Query: 14 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIKK 193
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPY EAR+EEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 194 IGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPSR 373
IGYN A+VAFVPISGWHGDNMLEPS K PW+KGW ++RKDG +GK LIEALDAI PPSR
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSR 240
Query: 374 PTEKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVVFAPAAITTEVKSVEMHHEALQ 553
PT+K LRLPLQDVYKIGGIGTVPVGRVETGILKPGM+V FAPAA+TTEVKSVEMHHEAL
Sbjct: 241 PTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALT 300
Query: 554 EAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
EA+PGDNVGFNVKN+SVKELRRGYVAGDS N PP+GA
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGA 337
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 654 PKALSDFTAQXIVLN 698
P+ +DFTAQ IVLN
Sbjct: 334 PRGAADFTAQVIVLN 348
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 573 LSPGIASCSASWCISTDLTSVVIAAGANTTTIPG 472
L PG+ A ++T++ SV + A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 249 bits (610), Expect = 2e-68
Identities = 113/125 (90%), Positives = 119/125 (95%)
Frame = +2
Query: 11 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYHEARYEEIKKEVSSYIK 190
TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPY E R+EEIKKEVSSYIK
Sbjct: 47 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIK 106
Query: 191 KIGYNPATVAFVPISGWHGDNMLEPSDKMPWFKGWTIDRKDGKVEGKCLIEALDAIQPPS 370
KIGYNPA VAFVPISGWHGDNMLE S KMPWFKGWT++RK+GKVEGKCLIEALDAI PP+
Sbjct: 107 KIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPT 166
Query: 371 RPTEK 385
RPT+K
Sbjct: 167 RPTDK 171
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 95.1 bits (226), Expect = 6e-22
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = +2
Query: 521 KSVEMHHEALQEAMPGDNVGFNVKNVSVKELRRGYVAGDSXNAPPKGA 664
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDS N PP+GA
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGA 48
Score = 25.0 bits (52), Expect = 0.69
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 654 PKALSDFTAQXIVLN 698
P+ +DFTAQ IVLN
Sbjct: 45 PRGAADFTAQVIVLN 59
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 244 VPARYRYERHSSGIVTNFLNV 182
+PA R++ H +G++T NV
Sbjct: 76 LPANKRFQAHCAGVITALNNV 96
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 244 VPARYRYERHSSGIVTNFLNV 182
+PA R++ H +G++T NV
Sbjct: 76 LPANKRFQAHCAGVITALNNV 96
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +2
Query: 137 YHEARYEEIKKEVSSYIKKIGYNPATVAFVPI 232
Y+ + Y ++Y KK+ YN + +P+
Sbjct: 89 YNYSNYNNYNNNYNNYNKKLYYNINYIEQIPV 120
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +2
Query: 446 GRVETGILKPGMVVVFAPAAITTEVKSVEMHHEAL 550
G +E + P M +V+A + I S+E A+
Sbjct: 143 GHIEDDYVGPAMELVYAWSTIDYTYDSIEARDSAI 177
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/37 (24%), Positives = 17/37 (45%)
Frame = -2
Query: 141 W*GGSVESILFTPTISCFTPRVKASRACSRVCPFLLI 31
W G ++E+ + F+ V + CS P ++I
Sbjct: 477 WLGETIEAKTYPEVTMLFSDIVGFTEICSTATPMMVI 513
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,961
Number of Sequences: 438
Number of extensions: 4586
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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