Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1026
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 25 0.65
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 4.6
EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic hor... 22 6.0
DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic hor... 22 6.0
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 22 6.0
AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory recept... 22 6.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.0
AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory recept... 21 8.0
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 25.0 bits (52), Expect = 0.65
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 404 VVWRCCLETEAIVNKFLCYDFIIHIWNLRHGF 309
+++ C++TE V FLC + + N H F
Sbjct: 131 IIYSICVQTEKSVFDFLCRHTVEYFQNYIHFF 162
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 4.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 404 VVWRCCLETEAIVNKFLCY 348
V++ CCLET + +N Y
Sbjct: 248 VIFDCCLETVSALNGAFLY 266
>EF222290-1|ABN79650.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 493 NSTIC*LFIKLTRKTTSKIS 552
N+T+ L +K RKT S+I+
Sbjct: 70 NTTVLVLIVKRRRKTPSRIN 89
>DQ422965-1|ABE02225.1| 378|Tribolium castaneum adipokinetic
hormone receptor protein.
Length = 378
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +1
Query: 493 NSTIC*LFIKLTRKTTSKIS 552
N+T+ L +K RKT S+I+
Sbjct: 70 NTTVLVLIVKRRRKTPSRIN 89
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 386 LETEAIVNKFLCYDFIIHIWNLRHGF 309
L A++ F Y F++ + L+H F
Sbjct: 178 LFVSALIKAFSKYQFVVLVLQLQHRF 203
>AM292332-1|CAL23144.2| 344|Tribolium castaneum gustatory receptor
candidate 11 protein.
Length = 344
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 386 LETEAIVNKFLCYDFIIHIWNLRHGF 309
L A++ F Y F++ + L+H F
Sbjct: 178 LFVSALIKAFSKYQFVVLVLQLQHRF 203
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 192 VVNLKSGDWQTEDVSLKK 245
++NL W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 192 VVNLKSGDWQTEDVSLKK 245
++NL W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 192 VVNLKSGDWQTEDVSLKK 245
++NL W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 192 VVNLKSGDWQTEDVSLKK 245
++NL W T +V++KK
Sbjct: 1051 IINLNVVSWGTREVAVKK 1068
>AM292375-1|CAL23187.2| 311|Tribolium castaneum gustatory receptor
candidate 54 protein.
Length = 311
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 553 NKQATSIGLKLNNRNS 600
NK I KLNNRNS
Sbjct: 50 NKNFQFIDKKLNNRNS 65
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,420
Number of Sequences: 336
Number of extensions: 3478
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -