Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-1026
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein. 31 5.8
U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mut... 31 5.8
U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia pro... 31 5.8
U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein. 31 5.8
U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-ki... 31 5.8
AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia m... 31 5.8
>U82828-2|AAB65827.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 2281 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 2329
>U55757-2|AAB38310.1| 1708|Homo sapiens ataxia-telangiectasia mutated
protein.
Length = 1708
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 933 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 981
>U55757-1|AAB38309.1| 3056|Homo sapiens ataxia-telangiectasia protein.
Length = 3056
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 2281 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 2329
>U33841-1|AAC50289.1| 3056|Homo sapiens ATM protein.
Length = 3056
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 2281 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 2329
>U26455-1|AAA86520.1| 1708|Homo sapiens phosphatidylinositol 3-kinase
homolog protein.
Length = 1708
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 933 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 981
>AY220758-1|AAO26044.1| 2756|Homo sapiens ataxia telangiectasia
mutated (includes complementation groups A, C and D)
protein.
Length = 2756
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 415 FHAASCGVVAWRLRQSSISFSAMILSFISGILDMASFILNTPCAVMSPS 269
+++ SCGV W+L ++ + ++ S IL L+ CA +PS
Sbjct: 2281 YNSVSCGVSEWQLEEAQVFWAKKEQSLALSILKQMIKKLDASCAANNPS 2329
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,753,595
Number of Sequences: 237096
Number of extensions: 2039348
Number of successful extensions: 6228
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6228
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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